Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c36471 Carica papaya HOM05D005571 ORTHO05D006919 2.8e-42 174.9 89 100.0
Potri.005G250800 Populus trichocarpa HOM05D005571 ORTHO05D006919 2.7e-29 131.7 87 75.9
Sabra05G0194000 Salix brachista HOM05D005571 ORTHO05D006919 1.2e-27 126.3 87 73.6
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 2.6e-27 125.2 87 74.7
Haze_22782 Corylus avellana HOM05D005571 ORTHO05D006919 1.3e-26 122.9 87 71.3
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 2.2e-26 122.1 87 70.1
Cfa014080 Carpinus fangiana HOM05D005571 ORTHO05D006919 1.1e-25 119.8 87 70.1
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 1.8e-25 119.0 87 69.0
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 2.7e-24 115.2 87 67.8
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 3.5e-24 114.8 87 67.8
Gohir.A05G179400 Gossypium hirsutum HOM05D005571 ORTHO05D006919 3.5e-24 114.8 87 70.1
Gohir.D05G182600 Gossypium hirsutum HOM05D005571 ORTHO05D006919 4.5e-24 114.4 87 70.1
Gorai.009G187900 Gossypium raimondii HOM05D005571 ORTHO05D006919 4.5e-24 114.4 87 70.1
QL02p014184 Quercus lobata HOM05D005571 ORTHO05D006919 4.5e-24 114.4 84 70.2
Atru.chr13.137 Acer truncatum HOM05D005571 ORTHO05D006919 5.9e-24 114.0 82 72.0
CiPaw.08G073400 Carya illinoinensis HOM05D005571 ORTHO05D006919 7.7e-24 113.6 89 67.4
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 2.9e-23 111.7 87 66.7
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 8.5e-23 110.2 91 67.0
CiPaw.07G138600 Carya illinoinensis HOM05D005571 ORTHO05D006919 1.5e-22 109.4 84 67.9
FAN27G2782 Fragaria x ananassa HOM05D005571 ORTHO05D006919 1.5e-22 109.4 88 69.3
Actinidia15492 Actinidia chinensis HOM05D005571 ORTHO05D006919 1.9e-22 109.0 87 64.4
FvH4_2g37430 Fragaria vesca HOM05D005571 ORTHO05D006919 1.9e-22 109.0 88 69.3
Potri.002G010400 Populus trichocarpa HOM05D005571 ORTHO05D006919 2.5e-22 108.6 87 63.2
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 3.2e-22 108.2 87 65.5
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 5.5e-22 107.5 88 68.2
FAN15G1374 Fragaria x ananassa HOM05D005571 ORTHO05D006919 7.2e-22 107.1 88 68.2
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 1.6e-21 105.9 79 68.4
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 2.7e-21 105.1 91 64.8
Dinv31944 Davidia involucrata HOM05D005571 ORTHO05D006919 2.7e-21 105.1 80 65.0
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 4.7e-21 104.4 87 62.1
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 8.0e-21 103.6 79 64.6
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 8.0e-21 103.6 88 63.6
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 1.0e-20 103.2 79 65.8
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 1.8e-20 102.4 88 68.2
Sabra11G0114300 Salix brachista HOM05D005571 ORTHO05D006919 2.3e-20 102.1 87 64.4
Gohir.D02G100200 Gossypium hirsutum HOM05D005571 ORTHO05D006919 5.2e-20 100.9 88 62.5
Gorai.005G113600 Gossypium raimondii HOM05D005571 ORTHO05D006919 5.2e-20 100.9 88 62.5
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 1.2e-19 99.8 79 64.6
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 1.2e-19 99.8 83 62.7
Gohir.A02G084300 Gossypium hirsutum HOM05D005571 ORTHO05D006919 2.0e-19 99.0 88 61.4
Peaxi162Scf00893g00005 Petunia axillaris HOM05D005571 ORTHO05D006919 2.0e-19 99.0 87 62.1
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 2.6e-19 98.6 90 61.1
THA.LOC104825425 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 2.6e-19 98.6 81 66.7
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 2.8e-18 95.1 80 62.5
Duzib128G0429 Durio zibethinus HOM05D005571 ORTHO05D006919 4.8e-18 94.4 87 58.6
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 4.8e-18 94.4 85 62.4
Cfa012650 Carpinus fangiana HOM05D005571 ORTHO05D006919 8.3e-18 93.6 87 57.5
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 8.3e-18 93.6 87 57.5
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 1.8e-17 92.4 90 55.6
GSVIVG01008671001 Vitis vinifera HOM05D005571 ORTHO05D006919 1.8e-17 92.4 87 56.3
TAR628G0603 Trochodendron aralioides HOM05D005571 ORTHO05D006919 2.4e-17 92.0 92 57.6
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 2.4e-17 92.0 86 59.3
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 5.4e-17 90.9 88 56.8
Sabra02G0007800 Salix brachista HOM05D005571 ORTHO05D006919 9.1e-17 90.1 87 56.3
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea HOM05D005571 ORTHO05D006919 1.2e-16 89.7 87 54.0
arahy.Tifrunner.gnm1.ann1.VC4QUA Arachis hypogaea HOM05D005571 ORTHO05D006919 1.2e-16 89.7 87 54.0
Oeu035840.1 Olea europaea HOM05D005571 ORTHO05D006919 1.2e-16 89.7 75 61.3
SalBow5G5667 Salvia bowleyana HOM05D005571 ORTHO05D006919 1.6e-16 89.4 90 56.7
SalBow7G0698 Salvia bowleyana HOM05D005571 ORTHO05D006919 1.6e-16 89.4 90 56.7
Lj4A11T70 Lonicera japonica HOM05D005571 ORTHO05D006919 3.5e-16 88.2 88 55.7
Rhsim06G0007100 Rhododendron simsii HOM05D005571 ORTHO05D006919 4.5e-16 87.8 86 59.3
Sabra11G0115000 Salix brachista HOM05D005571 ORTHO05D006919 4.5e-16 87.8 80 61.2
Sabra11G0115600 Salix brachista HOM05D005571 ORTHO05D006919 4.5e-16 87.8 80 61.2
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 1.7e-15 85.9 96 57.3
CSS0029462 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 2.9e-15 85.1 88 55.7
Ca_15432_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 2.9e-15 85.1 80 61.2
Ca_15457_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 2.9e-15 85.1 80 61.2
Glyma.06G018100 Glycine max HOM05D005571 ORTHO05D006919 2.9e-15 85.1 89 56.2
MSTRG.24929 Avicennia marina HOM05D005571 ORTHO05D006919 1.5e-14 82.8 93 54.8
PGSC0003DMG400009903 Solanum tuberosum HOM05D005571 ORTHO05D006919 1.9e-14 82.4 81 56.8
Sc02g0009100 Simmondsia chinensis HOM05D005571 ORTHO05D006919 2.5e-14 82.0 83 53.0
Lsat_1_v5_gn_2_4041 Lactuca sativa HOM05D005571 ORTHO05D006919 4.2e-14 81.3 74 55.4
Lj1g0015612 Lotus japonicus HOM05D005571 ORTHO05D006919 4.2e-14 81.3 90 57.8
Lalb_Chr23g0265781 Lupinus albus HOM05D005571 ORTHO05D006919 5.5e-14 80.9 81 60.5
Sopen04g035980 Solanum pennellii HOM05D005571 ORTHO05D006919 7.2e-14 80.5 81 55.6
Oeu000692.1 Olea europaea HOM05D005571 ORTHO05D006919 9.5e-14 80.1 80 55.0
Glyma.04G017800 Glycine max HOM05D005571 ORTHO05D006919 1.6e-13 79.3 80 57.5
TPR.G38112 Trifolium pratense HOM05D005571 ORTHO05D006919 2.1e-13 79.0 83 56.6
Medtr3g115300 Medicago truncatula HOM05D005571 ORTHO05D006919 2.8e-13 78.6 83 57.8
Solyc04g082380.4 Solanum lycopersicum HOM05D005571 ORTHO05D006919 4.7e-13 77.8 81 54.3
MBI05_g43168_MAGBIO Magnolia biondii HOM05D005571 ORTHO05D006919 8.0e-13 77.0 81 53.1
Prupe.1G354300 Prunus persica HOM05D005571 ORTHO05D006919 8.0e-13 77.0 106 49.1
Psat0s2670g0120 Pisum sativum HOM05D005571 ORTHO05D006919 1.4e-12 76.3 83 54.2
Phvul.009G010900 Phaseolus vulgaris HOM05D005571 ORTHO05D006919 1.8e-12 75.9 83 54.2
ECA238G3324 Erigeron canadensis HOM05D005571 ORTHO05D007881 2.3e-12 75.5 76 57.9
SGA_v2.0_scaffold133G34635 Striga asiatica HOM05D005571 ORTHO05D006919 3.0e-12 75.1 83 54.2
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 1.5e-11 72.8 79 57.0
Aqoxy6G01708 Aquilegia oxysepala HOM05D005571 ORTHO05D006919 2.0e-11 72.4 81 55.6
MSTRG.977 Avicennia marina HOM05D005571 ORTHO05D006919 2.6e-11 72.0 79 48.1
THA.LOC104813174 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 2.6e-11 72.0 79 55.7
HanXRQChr06g0183961 Helianthus annuus HOM05D005571 ORTHO05D006919 5.7e-11 70.9 74 52.7
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 5.7e-11 70.9 71 54.9
Aa31LG9G12460 Aethionema arabicum HOM05D005571 ORTHO05D006919 7.5e-11 70.5 82 52.4
Carub.0008s0685 Capsella rubella HOM05D005571 ORTHO05D006919 7.5e-11 70.5 83 55.4
AL8G19260 Arabidopsis lyrata HOM05D005571 ORTHO05D006919 1.7e-10 69.3 83 55.4
Hund01764 Selenicereus undatus HOM05D005571 ORTHO05D006919 2.2e-10 68.9 78 55.1
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 2.8e-10 68.6 70 57.1
AT5G42330 Arabidopsis thaliana HOM05D005571 ORTHO05D006919 4.9e-10 67.8 83 54.2
CARHR284960 Cardamine hirsuta HOM05D005571 ORTHO05D006919 6.3e-10 67.4 82 57.3
Sp6g25100 Schrenkiella parvula HOM05D005571 ORTHO05D006919 6.3e-10 67.4 92 54.3
unitig_747.g21542 Utricularia gibba HOM05D005571 ORTHO05D006919 6.3e-10 67.4 82 47.6
Thhalv10014687m.g Eutrema salsugineum HOM05D005571 ORTHO05D006919 8.3e-10 67.0 84 57.1
BcaB01g04868 Brassica carinata HOM05D005571 ORTHO05D006919 2.4e-09 65.5 81 55.6
PSO675G2006 Papaver somniferum HOM05D005571 ORTHO05D006919 2.4e-09 65.5 82 41.5
BolC3t13569H Brassica oleracea HOM05D005571 ORTHO05D006919 4.1e-09 64.7 83 54.2
HanXRQChr14g0428071 Helianthus annuus HOM05D005571 ORTHO05D006919 5.4e-09 64.3 75 52.0
PSO541G4697 Papaver somniferum HOM05D005571 ORTHO05D006919 7.0e-09 63.9 82 40.2
BcaB08g36584 Brassica carinata HOM05D005571 ORTHO05D006919 9.2e-09 63.5 90 54.4
EL10Ac1g01953 Beta vulgaris HOM05D005571 ORTHO05D006919 2.0e-08 62.4 87 49.4
A03p09420 Brassica napus HOM05D005571 ORTHO05D006919 2.7e-08 62.0 83 53.0
BraA03t10260Z Brassica rapa HOM05D005571 ORTHO05D006919 2.7e-08 62.0 83 53.0
CSS0039739 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 4.5e-08 61.2 78 48.7
BcaB01g05139 Brassica carinata HOM05D005571 ORTHO05D006919 7.8e-08 60.5 83 51.8
C03p11000 Brassica napus HOM05D005571 ORTHO05D006919 7.8e-08 60.5 83 51.8
Ah.11g041150 Amaranthus hybridus HOM05D005571 ORTHO05D006919 1.0e-07 60.1 84 45.2
Hund05103 Selenicereus undatus HOM05D001348 ORTHO05D002788 1.0e-07 60.1 76 50.0
SHI42933 Sapria himalayana HOM05D005571 ORTHO05D006919 6.6e-07 57.4 82 42.7
AUR62040795 Chenopodium quinoa HOM05D005571 ORTHO05D006919 1.1e-06 56.6 79 45.6
AUR62036861 Chenopodium quinoa HOM05D005571 ORTHO05D006919 1.5e-06 56.2 87 42.5
CANSAT25G0564 Cannabis sativa HOM05D005571 ORTHO05D006919 7.3e-06 53.9 79 46.8


User provided reference genes

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