Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c36372.1 Carica papaya HOM05D000205 ORTHO05D118234 1.2e-36 156.0 78 100.0
GSVIVG01022035001 Vitis vinifera HOM05D000205 ORTHO05D000438 3.6e-09 64.7 86 43.0
QL03p004128 Quercus lobata HOM05D000205 ORTHO05D000438 1.0e-08 63.2 82 45.1
Potri.005G037000 Populus trichocarpa HOM05D000205 ORTHO05D000438 4.0e-08 61.2 79 46.8
Manes.09G162300 Manihot esculenta HOM05D000205 ORTHO05D000438 6.8e-08 60.5 58 50.0
Thecc.05G298800 Theobroma cacao HOM05D000205 ORTHO05D000438 6.8e-08 60.5 72 47.2
COL.COLO4_11360 Corchorus olitorius HOM05D000205 ORTHO05D000438 8.9e-08 60.1 81 40.7
Peaxi162Scf00434g00510 Petunia axillaris HOM05D000205 ORTHO05D000438 8.9e-08 60.1 80 45.0
Gohir.D11G271600 Gossypium hirsutum HOM05D000205 ORTHO05D000438 1.2e-07 59.7 68 48.5
CSS0037127 Camellia sinensis var. sinensis HOM05D000205 ORTHO05D000438 1.5e-07 59.3 78 41.0
COL.COLO4_13544 Corchorus olitorius HOM05D000205 ORTHO05D000438 1.5e-07 59.3 50 56.0
Potri.005G039900 Populus trichocarpa HOM05D000205 ORTHO05D000438 1.5e-07 59.3 42 64.3
QL08p050970 Quercus lobata HOM05D000015 ORTHO05D000249 1.5e-07 59.3 42 66.7
Gorai.007G292400 Gossypium raimondii HOM05D000205 ORTHO05D000438 2.0e-07 58.9 68 48.5
Manes.08G124200 Manihot esculenta HOM05D000205 ORTHO05D000438 2.0e-07 58.9 86 43.0
TWI56G0605 Tripterygium wilfordii HOM05D000205 ORTHO05D000438 2.0e-07 58.9 79 43.0
Gohir.A11G261600 Gossypium hirsutum HOM05D000205 ORTHO05D000438 3.4e-07 58.2 68 48.5
Hma1.2p1_0617F.1_g190080 Hydrangea macrophylla HOM05D000205 ORTHO05D000438 3.4e-07 58.2 76 40.8
Hma1.2p1_0617F.1_g190090 Hydrangea macrophylla HOM05D000205 ORTHO05D000438 4.4e-07 57.8 78 37.2
Eucgr.B02023 Eucalyptus grandis HOM05D000205 ORTHO05D000438 7.5e-07 57.0 80 43.8
FAN14G0109 Fragaria x ananassa HOM05D000205 ORTHO05D000438 7.5e-07 57.0 85 42.4
FAN14G1503 Fragaria x ananassa HOM05D000205 ORTHO05D000438 7.5e-07 57.0 85 42.4
Eucgr.B02026 Eucalyptus grandis HOM05D000205 ORTHO05D000438 9.8e-07 56.6 75 45.3
QL03p003432 Quercus lobata HOM05D000205 ORTHO05D000438 9.8e-07 56.6 59 45.8
QL03p003720 Quercus lobata HOM05D000205 ORTHO05D000438 9.8e-07 56.6 59 45.8
vmacro05042 Vaccinium macrocarpon HOM05D000205 ORTHO05D000438 9.8e-07 56.6 78 41.0
Aqoxy5G00576 Aquilegia oxysepala HOM05D000205 ORTHO05D000438 1.3e-06 56.2 56 42.9
Dinv40249 Davidia involucrata HOM05D000205 ORTHO05D000438 1.3e-06 56.2 48 52.1
FvH4_6g05051 Fragaria vesca HOM05D000205 ORTHO05D000438 1.3e-06 56.2 43 60.5
FvH4_6g05092 Fragaria vesca HOM05D000205 ORTHO05D000438 1.3e-06 56.2 43 60.5
PGR004G2166 Punica granatum HOM05D000205 ORTHO05D000438 1.3e-06 56.2 68 41.2
QL03p003787 Quercus lobata HOM05D000205 ORTHO05D000438 1.3e-06 56.2 86 43.0
RcHm_v2.0_Chr3g0453651 Rosa chinensis HOM05D000205 ORTHO05D000438 1.7e-06 55.8 68 44.1
Thecc.05G298700 Theobroma cacao HOM05D000205 ORTHO05D000438 1.7e-06 55.8 77 44.2
CiPaw.07G013300 Carya illinoinensis HOM05D000205 ORTHO05D000438 2.2e-06 55.5 54 50.0
Dinv44444 Davidia involucrata HOM05D000205 ORTHO05D000438 2.2e-06 55.5 63 44.4
QL03p003858 Quercus lobata HOM05D000205 ORTHO05D000438 2.2e-06 55.5 57 50.9
RcHm_v2.0_Chr3g0453591 Rosa chinensis HOM05D000205 ORTHO05D022564 2.2e-06 55.5 57 45.6
Sabra05G0038900 Salix brachista HOM05D000205 ORTHO05D000438 2.2e-06 55.5 46 54.3
vmacro05040 Vaccinium macrocarpon HOM05D000205 ORTHO05D000438 2.2e-06 55.5 46 56.5
vmacro05041 Vaccinium macrocarpon HOM05D000205 ORTHO05D000438 2.2e-06 55.5 46 56.5
Gorai.007G293100 Gossypium raimondii HOM05D000205 ORTHO05D000438 2.9e-06 55.1 53 47.2
GSVIVG01022034001 Vitis vinifera HOM05D000205 ORTHO05D000438 2.9e-06 55.1 81 40.7
Ciclev10001032m.g Citrus clementina HOM05D000205 ORTHO05D000438 3.7e-06 54.7 75 41.3
Cc03_g02590 Coffea canephora HOM05D000205 ORTHO05D000438 3.7e-06 54.7 83 37.3
Duzib177G0624 Durio zibethinus HOM05D000205 ORTHO05D000438 3.7e-06 54.7 80 46.2
Eucgr.B02014 Eucalyptus grandis HOM05D000205 ORTHO05D000438 3.7e-06 54.7 43 58.1
Gorai.007G292500 Gossypium raimondii HOM05D000205 ORTHO05D000438 3.7e-06 54.7 77 42.9
SalBow5G2868 Salvia bowleyana HOM05D000205 ORTHO05D000438 3.7e-06 54.7 59 45.8
Duzib128G1687 Durio zibethinus HOM05D000205 ORTHO05D000438 4.9e-06 54.3 41 58.5
Gohir.D11G271800 Gossypium hirsutum HOM05D000205 ORTHO05D000438 4.9e-06 54.3 84 40.5
Gohir.D11G272100 Gossypium hirsutum HOM05D000205 ORTHO05D000438 4.9e-06 54.3 77 39.0
Gorai.007G292700 Gossypium raimondii HOM05D000205 ORTHO05D000438 4.9e-06 54.3 84 40.5
Hma1.2p1_3523F.1_g336540 Hydrangea macrophylla HOM05D000205 ORTHO05D013496 4.9e-06 54.3 82 39.0
Peaxi162Scf00185g00210 Petunia axillaris HOM05D000205 ORTHO05D000438 4.9e-06 54.3 42 54.8
PGR083G1419 Punica granatum HOM05D000205 ORTHO05D000438 4.9e-06 54.3 45 55.6
QL03p003869 Quercus lobata HOM05D000205 ORTHO05D000438 4.9e-06 54.3 68 47.1
Rhsim07G0178700 Rhododendron simsii HOM05D000205 ORTHO05D000438 4.9e-06 54.3 80 42.5
Dinv40241 Davidia involucrata HOM05D000205 ORTHO05D000438 6.4e-06 53.9 48 50.0
Gohir.A11G261700 Gossypium hirsutum HOM05D000205 ORTHO05D000438 6.4e-06 53.9 77 42.9
Gohir.A11G262200 Gossypium hirsutum HOM05D000205 ORTHO05D000438 6.4e-06 53.9 88 37.5
MD11G1293300 Malus domestica HOM05D000205 ORTHO05D000438 6.4e-06 53.9 40 60.0
QL03p003929 Quercus lobata HOM05D000205 ORTHO05D000438 6.4e-06 53.9 79 39.2
QL03p003993 Quercus lobata HOM05D000205 ORTHO05D000438 6.4e-06 53.9 97 37.1
RcHm_v2.0_Chr3g0453561 Rosa chinensis HOM05D000205 ORTHO05D000438 6.4e-06 53.9 42 57.1
Ciclev10001263m.g Citrus clementina HOM05D000205 ORTHO05D000438 8.3e-06 53.5 57 45.6
Gohir.D11G271700 Gossypium hirsutum HOM05D000205 ORTHO05D000438 8.3e-06 53.5 77 42.9
HanXRQChr01g0003201 Helianthus annuus HOM05D000205 ORTHO05D000438 8.3e-06 53.5 40 60.0
THA.LOC104813082 Tarenaya hassleriana HOM05D000205 ORTHO05D011029 8.3e-06 53.5 66 42.4
TAR365G0820 Trochodendron aralioides HOM05D000205 ORTHO05D000438 8.3e-06 53.5 81 43.2


User provided reference genes

Program Settings