Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c36210 Carica papaya HOM05D000002 ORTHO05D000047 7.2e-32 139.8 64 100.0
Hma1.2p1_1251F.1_g270340 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.5e-24 114.8 64 79.7
Hma1.2p1_1936F.1_g308230 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.3e-24 114.4 64 79.7
Cpa.g.sc1.54 Carica papaya HOM05D000002 ORTHO05D000047 5.2e-22 107.1 63 77.8
Migut.G00569 Erythranthe guttata HOM05D000002 ORTHO05D000047 5.2e-22 107.1 64 73.4
SHI25402 Sapria himalayana HOM05D000105 ORTHO05D000023 4.4e-21 104.0 64 71.9
Migut.F00764 Erythranthe guttata HOM05D000002 ORTHO05D000047 9.8e-21 102.8 64 75.0
Migut.G01342 Erythranthe guttata HOM05D000002 ORTHO05D000047 9.8e-21 102.8 64 75.0
SHI01834 Sapria himalayana HOM05D000105 ORTHO05D000047 2.2e-20 101.7 64 71.9
SHI10964 Sapria himalayana HOM05D000002 ORTHO05D000047 2.2e-20 101.7 64 71.9
SHI00431 Sapria himalayana HOM05D000002 ORTHO05D000047 2.9e-20 101.3 64 68.8
SHI04827 Sapria himalayana HOM05D000002 ORTHO05D000047 1.1e-19 99.4 64 67.2
TPR.G33357 Trifolium pratense HOM05D000002 ORTHO05D000047 1.4e-19 99.0 64 65.6
SHI04532 Sapria himalayana HOM05D000002 ORTHO05D000047 3.2e-19 97.8 64 71.9
SHI34106 Sapria himalayana HOM05D000002 ORTHO05D000047 4.1e-19 97.4 64 68.8
SHI06719 Sapria himalayana HOM05D000002 ORTHO05D000047 5.4e-19 97.1 64 68.8
SHI07485 Sapria himalayana HOM05D000002 ORTHO05D000047 5.4e-19 97.1 64 68.8
SHI22972 Sapria himalayana HOM05D000002 ORTHO05D000047 7.0e-19 96.7 60 71.7
Gorai.004G150100 Gossypium raimondii HOM05D000002 ORTHO05D000047 1.2e-18 95.9 64 65.6
SHI34389 Sapria himalayana HOM05D000002 ORTHO05D000047 1.2e-18 95.9 64 67.2
SHI16591 Sapria himalayana HOM05D000002 ORTHO05D000047 1.6e-18 95.5 55 76.4
HPP92_018323 Vanilla planifolia HOM05D000002 ORTHO05D000047 2.0e-18 95.1 64 60.9
SHI14623 Sapria himalayana HOM05D000002 ORTHO05D000047 2.7e-18 94.7 64 64.1
Gohir.D01G175350 Gossypium hirsutum HOM05D000002 ORTHO05D000047 5.9e-18 93.6 64 64.1
SHI11030 Sapria himalayana HOM05D000002 ORTHO05D000047 7.8e-18 93.2 60 68.3
SHI12088 Sapria himalayana HOM05D000002 ORTHO05D000047 1.3e-17 92.4 64 62.5
SHI38826 Sapria himalayana HOM05D000002 ORTHO05D000047 1.7e-17 92.0 64 64.1
SHI13377 Sapria himalayana HOM05D000002 ORTHO05D000047 3.9e-17 90.9 64 62.5
SHI17648 Sapria himalayana HOM05D000002 ORTHO05D000047 3.9e-17 90.9 64 65.6
SHI01551 Sapria himalayana HOM05D000002 ORTHO05D000047 6.6e-17 90.1 65 66.2
SHI15215 Sapria himalayana HOM05D000002 ORTHO05D000047 1.9e-16 88.6 64 64.1
SHI03848 Sapria himalayana HOM05D000002 ORTHO05D000047 1.6e-15 85.5 61 62.3
SHI19772 Sapria himalayana HOM05D000002 ORTHO05D000047 2.1e-15 85.1 64 64.1
SHI26912 Sapria himalayana HOM05D000002 ORTHO05D000047 2.1e-15 85.1 60 63.3
SHI01905 Sapria himalayana HOM05D000002 ORTHO05D000047 6.2e-15 83.6 54 70.4
TWI34G1301 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 6.2e-15 83.6 60 65.0
SHI24099 Sapria himalayana HOM05D000002 ORTHO05D000047 1.0e-14 82.8 64 59.4
SHI26895 Sapria himalayana HOM05D000002 ORTHO05D000047 1.0e-14 82.8 55 65.5
Hma1.2p1_2308F.1_g319490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.3e-14 81.6 64 54.7
SHI18210 Sapria himalayana HOM05D000735 ORTHO05D000838 6.8e-14 80.1 52 67.3
SHI02520 Sapria himalayana HOM05D000002 ORTHO05D000047 1.2e-13 79.3 60 65.0
Rhsim12G0065600 Rhododendron simsii HOM05D000002 ORTHO05D000047 2.0e-13 78.6 64 53.1
SHI24836 Sapria himalayana HOM05D059794 ORTHO05D000047 2.6e-13 78.2 54 63.0
Rhsim02G0004200 Rhododendron simsii HOM05D000002 ORTHO05D000047 3.4e-13 77.8 64 51.6
Rhsim05G0070200 Rhododendron simsii HOM05D000002 ORTHO05D000047 9.8e-13 76.3 64 50.0
MD09G1165800 Malus domestica HOM05D000002 ORTHO05D000047 1.3e-12 75.9 63 55.6
SHI11985 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-12 75.9 47 68.1
Rhsim06G0010400 Rhododendron simsii HOM05D000002 ORTHO05D000047 1.7e-12 75.5 64 51.6
Rhsim12G0120200 Rhododendron simsii HOM05D000002 ORTHO05D000047 1.7e-12 75.5 64 51.6
Rhsim07G0134800 Rhododendron simsii HOM05D000002 ORTHO05D000047 2.9e-12 74.7 64 50.0
MD12G1154200 Malus domestica HOM05D000002 ORTHO05D000001 8.3e-12 73.2 59 50.8
FvH4_3g04761 Fragaria vesca HOM05D000002 ORTHO05D000047 1.9e-11 72.0 64 40.6
FvH4_6g02393 Fragaria vesca HOM05D000002 ORTHO05D000001 1.9e-11 72.0 64 40.6
FvH4_3g30981 Fragaria vesca HOM05D000002 ORTHO05D000047 3.2e-11 71.2 64 40.6
FvH4_6g40340 Fragaria vesca HOM05D000258 ORTHO05D000153 3.2e-11 71.2 57 45.6
FvH4_4g14844 Fragaria vesca HOM05D000002 ORTHO05D000047 4.1e-11 70.9 64 39.1
Rhsim03G0156500 Rhododendron simsii HOM05D000002 ORTHO05D000047 4.1e-11 70.9 64 48.4
Sabra16G0048200 Salix brachista HOM05D000002 ORTHO05D000047 5.4e-11 70.5 57 45.6
FvH4_3g15781 Fragaria vesca HOM05D000002 ORTHO05D000047 9.2e-11 69.7 60 46.7
Atru.chr3.2976 Acer truncatum HOM05D000002 ORTHO05D000047 2.0e-10 68.6 57 43.9
FvH4_2g03582 Fragaria vesca HOM05D000002 ORTHO05D000047 2.7e-10 68.2 64 40.6
SHI35763 Sapria himalayana HOM05D000002 ORTHO05D000047 3.5e-10 67.8 37 78.4
VMungo0251G0557 Vigna mungo HOM05D004561 ORTHO05D005315 2.3e-09 65.1 64 37.5
Rhsim04G0185800 Rhododendron simsii HOM05D000118 ORTHO05D000098 3.9e-09 64.3 57 45.6
CSS0010407 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.0e-09 63.9 64 40.6
CSS0018273 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.0e-09 63.9 64 40.6
CSS0027184 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.0e-09 63.9 64 40.6
SHI14889 Sapria himalayana HOM05D000002 ORTHO05D000047 5.0e-09 63.9 42 69.0
Hma1.2p1_0384F.1_g140880 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.6e-09 63.5 59 44.1
Rhsim09G0014100 Rhododendron simsii HOM05D000002 ORTHO05D000001 8.6e-09 63.2 53 47.2
CSS0037966 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-08 62.8 64 40.6
Hma1.2p1_1117F.1_g259070 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-08 62.8 64 42.2
Hma1.2p1_0222F.1_g093830 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.5e-08 62.4 59 42.4
FvH4_6g21292 Fragaria vesca HOM05D000002 ORTHO05D000047 1.9e-08 62.0 60 40.0
FvH4_6g29691 Fragaria vesca HOM05D000002 ORTHO05D000047 1.9e-08 62.0 54 46.3
Hma1.2p1_0570F.1_g180540 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.5e-08 61.6 64 40.6
MD17G1267900 Malus domestica HOM05D000002 ORTHO05D000001 2.5e-08 61.6 55 45.5
Rhsim05G0165100 Rhododendron simsii HOM05D000002 ORTHO05D000047 2.5e-08 61.6 64 39.1
PSO170G5500 Papaver somniferum HOM05D000002 ORTHO05D000047 3.3e-08 61.2 57 40.4
Rhsim09G0021000 Rhododendron simsii HOM05D000002 ORTHO05D000047 3.3e-08 61.2 53 45.3
Rhsim10G0106300 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.3e-08 61.2 53 45.3
Rhsim10G0107100 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.3e-08 61.2 53 45.3
RhsimUnG0055800 Rhododendron simsii HOM05D000002 ORTHO05D000047 3.3e-08 61.2 53 45.3
FvH4_4g14243 Fragaria vesca HOM05D000002 ORTHO05D000047 4.3e-08 60.8 64 35.9
Rhsim01G0108500 Rhododendron simsii HOM05D000002 ORTHO05D000047 4.3e-08 60.8 64 37.5
CSS0039172 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.6e-08 60.5 64 35.9
Rhsim11G0163200 Rhododendron simsii HOM05D000002 ORTHO05D000047 5.6e-08 60.5 59 40.7
Hma1.2p1_0046F.1_g026950 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.3e-08 60.1 55 43.6
Rhsim01G0110400 Rhododendron simsii HOM05D008700 ORTHO05D000047 7.3e-08 60.1 60 43.3
Rhsim02G0191000 Rhododendron simsii HOM05D000002 ORTHO05D000047 7.3e-08 60.1 59 40.7
Rhsim03G0044200 Rhododendron simsii HOM05D000002 ORTHO05D000047 9.5e-08 59.7 53 45.3
Rhsim10G0196500 Rhododendron simsii HOM05D000002 ORTHO05D000047 9.5e-08 59.7 60 40.0
TPR.G40668 Trifolium pratense HOM05D000002 ORTHO05D000047 9.5e-08 59.7 59 39.0
MSTRG.15123 Avicennia marina HOM05D000002 ORTHO05D000001 1.2e-07 59.3 57 42.1
Sabra17G0116000 Salix brachista HOM05D000002 ORTHO05D000047 1.6e-07 58.9 60 38.3
CSS0025419 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.1e-07 58.5 53 45.3
CANSAT21G2108 Cannabis sativa HOM05D000002 ORTHO05D000047 2.1e-07 58.5 62 37.1
FvH4_6g37042 Fragaria vesca HOM05D000002 ORTHO05D000047 2.1e-07 58.5 62 40.3
Sabra12G0082000 Salix brachista HOM05D000002 ORTHO05D000047 2.1e-07 58.5 60 41.7
CANSAT35G0945 Cannabis sativa HOM05D000002 ORTHO05D000047 2.8e-07 58.2 62 38.7
FvH4_7g23352 Fragaria vesca HOM05D000002 ORTHO05D000047 2.8e-07 58.2 62 41.9
Hma1.2p1_0337F.1_g129350 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.8e-07 58.2 66 40.9
Hma1.2p1_0337F.1_g129355 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.8e-07 58.2 66 40.9
Hma1.2p1_1643F.1_g295170 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.8e-07 58.2 59 40.7
Sabra05G0004500 Salix brachista HOM05D000002 ORTHO05D000047 2.8e-07 58.2 60 38.3
CSS0035060 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.6e-07 57.8 59 40.7
AUR62008834 Chenopodium quinoa HOM05D000002 ORTHO05D000047 3.6e-07 57.8 58 36.2
RhsimUnG0038000 Rhododendron simsii HOM05D000002 ORTHO05D000047 4.7e-07 57.4 60 41.7
RhsimUnG0038200 Rhododendron simsii HOM05D000002 ORTHO05D000047 4.7e-07 57.4 60 41.7
Sabra14G0120100 Salix brachista HOM05D000002 ORTHO05D000047 4.7e-07 57.4 50 44.0
Sabra18G0083300 Salix brachista HOM05D000002 ORTHO05D000047 4.7e-07 57.4 50 44.0
Sopen11g023580 Solanum pennellii HOM05D000002 ORTHO05D000047 4.7e-07 57.4 55 45.5
FvH4_3g32402 Fragaria vesca HOM05D000002 ORTHO05D000047 6.2e-07 57.0 57 42.1
Sabra18G0123800 Salix brachista HOM05D000002 ORTHO05D000047 6.2e-07 57.0 60 36.7
Hma1.2p1_1042F.1_g251180 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.1e-07 56.6 64 35.9
QL04p083856 Quercus lobata HOM05D000002 ORTHO05D000001 8.1e-07 56.6 64 39.1
Rhsim02G0046700 Rhododendron simsii HOM05D000002 ORTHO05D000047 1.1e-06 56.2 57 40.4
Sabra03G0006700 Salix brachista HOM05D000002 ORTHO05D000047 1.1e-06 56.2 60 36.7
Sabra05G0166200 Salix brachista HOM05D000002 ORTHO05D000047 1.1e-06 56.2 60 36.7
Sabra05G0166300 Salix brachista HOM05D000002 ORTHO05D000047 1.1e-06 56.2 60 36.7
Nn5g26828 Nelumbo nucifera HOM05D000002 ORTHO05D000047 1.4e-06 55.8 54 40.7
TPR.G9663 Trifolium pratense HOM05D000002 ORTHO05D000047 1.4e-06 55.8 50 44.0
Atru.chr9.979 Acer truncatum HOM05D000002 ORTHO05D000047 1.8e-06 55.5 58 34.5
Ca_05004_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 1.8e-06 55.5 57 45.6
Rhsim04G0056500 Rhododendron simsii HOM05D000002 ORTHO05D000047 1.8e-06 55.5 64 34.4
Sabra10G0016600 Salix brachista HOM05D000002 ORTHO05D000047 1.8e-06 55.5 50 42.0
Sabra15G0058800 Salix brachista HOM05D000002 ORTHO05D000047 1.8e-06 55.5 50 40.0
THA.LOC104798676 Tarenaya hassleriana HOM05D000002 ORTHO05D000047 1.8e-06 55.5 63 31.7
Hma1.2p1_0536F.1_g174090 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.3e-06 55.1 62 35.5
Sopen08g004960 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-06 55.1 64 34.4
Sopen12g026990 Solanum pennellii HOM05D000002 ORTHO05D000047 2.3e-06 55.1 64 34.4
TPR.G38892 Trifolium pratense HOM05D000002 ORTHO05D000047 2.3e-06 55.1 50 48.0
Atru.chr4.1324 Acer truncatum HOM05D000002 ORTHO05D000047 3.1e-06 54.7 56 37.5
Hma1.2p1_0877F.1_g231750 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.1e-06 54.7 58 37.9
Nn2g15827 Nelumbo nucifera HOM05D000002 ORTHO05D000047 3.1e-06 54.7 59 37.3
Nitab4.5_0005663g0030 Nicotiana tabacum HOM05D000002 ORTHO05D000047 3.1e-06 54.7 52 42.3
Rhsim04G0189400 Rhododendron simsii HOM05D000002 ORTHO05D000047 3.1e-06 54.7 58 37.9
TPR.G31233 Trifolium pratense HOM05D000002 ORTHO05D000047 3.1e-06 54.7 56 39.3
FvH4_3g38851 Fragaria vesca HOM05D000002 ORTHO05D000001 4.0e-06 54.3 56 39.3
FvH4_5g38641 Fragaria vesca HOM05D000002 ORTHO05D000047 4.0e-06 54.3 56 39.3
MD04G1051300 Malus domestica HOM05D000002 ORTHO05D000001 4.0e-06 54.3 59 30.5
PSO541G1446 Papaver somniferum HOM05D000002 ORTHO05D000047 4.0e-06 54.3 61 36.1
Sabra08G0128400 Salix brachista HOM05D000002 ORTHO05D000047 4.0e-06 54.3 46 47.8
Sabra16G0122200 Salix brachista HOM05D000002 ORTHO05D000047 4.0e-06 54.3 64 32.8
Sabra16G0131100 Salix brachista HOM05D000002 ORTHO05D000047 4.0e-06 54.3 64 32.8
PGSC0003DMG400013137 Solanum tuberosum HOM05D000002 ORTHO05D000047 4.0e-06 54.3 57 38.6
AUR62014715 Chenopodium quinoa HOM05D000002 ORTHO05D000001 5.2e-06 53.9 64 29.7
Hma1.2p1_0555F.1_g177970 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.2e-06 53.9 64 34.4
Hma1.2p1_1103F.1_g257290 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.2e-06 53.9 64 35.9
Lalb_Chr19g0129161 Lupinus albus HOM05D000002 ORTHO05D000047 5.2e-06 53.9 54 44.4
Sabra05G0164100 Salix brachista HOM05D000002 ORTHO05D000047 5.2e-06 53.9 50 40.0
Sabra16G0276500 Salix brachista HOM05D000002 ORTHO05D000047 5.2e-06 53.9 64 34.4
TPR.G835 Trifolium pratense HOM05D000002 ORTHO05D000047 5.2e-06 53.9 58 43.1
FvH4_4g07035 Fragaria vesca HOM05D000002 ORTHO05D000047 6.8e-06 53.5 49 42.9
Hma1.2p1_0797F.1_g219440 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.8e-06 53.5 64 35.9
Rhsim06G0111500 Rhododendron simsii HOM05D000002 ORTHO05D000047 6.8e-06 53.5 57 40.4
Sabra16G0264600 Salix brachista HOM05D000002 ORTHO05D000047 6.8e-06 53.5 50 46.0
Sabra19G0055400 Salix brachista HOM05D000002 ORTHO05D000047 6.8e-06 53.5 64 34.4
Atru.chr9.907 Acer truncatum HOM05D000002 ORTHO05D000047 8.9e-06 53.1 58 34.5
Lalb_Chr24g0402951 Lupinus albus HOM05D000002 ORTHO05D000047 8.9e-06 53.1 57 35.1
PSO170G4845 Papaver somniferum HOM05D000002 ORTHO05D000047 8.9e-06 53.1 57 38.6
Sopen01g028580 Solanum pennellii HOM05D000002 ORTHO05D000047 8.9e-06 53.1 63 39.7
Sopen09g009900 Solanum pennellii HOM05D000014 ORTHO05D000016 8.9e-06 53.1 64 35.9
TPR.G12327 Trifolium pratense HOM05D000002 ORTHO05D000047 8.9e-06 53.1 50 40.0
TPR.G36423 Trifolium pratense HOM05D000010 ORTHO05D004316 8.9e-06 53.1 57 36.8
TWI79G1246 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 8.9e-06 53.1 63 38.1


User provided reference genes

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