Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c36201.2 Carica papaya HOM05D005491 ORTHO05D006973 2.2e-35 151.8 76 100.0
Gohir.A05G114100 Gossypium hirsutum HOM05D005491 ORTHO05D006973 3.4e-28 127.9 74 82.4
Gorai.009G118600 Gossypium raimondii HOM05D005491 ORTHO05D006973 3.4e-28 127.9 74 82.4
Thecc.06G064400 Theobroma cacao HOM05D005491 ORTHO05D006973 2.2e-27 125.2 74 79.7
Gohir.D05G114500 Gossypium hirsutum HOM05D005491 ORTHO05D006973 2.9e-27 124.8 74 81.1
Potri.010G250200 Populus trichocarpa HOM05D005491 ORTHO05D006973 3.7e-27 124.4 74 79.7
Manes.16G045400 Manihot esculenta HOM05D005491 ORTHO05D006973 2.4e-26 121.7 74 75.7
Eucgr.F04012 Eucalyptus grandis HOM05D005491 ORTHO05D006973 3.2e-26 121.3 74 77.0
Duzib192G0032 Durio zibethinus HOM05D005491 ORTHO05D006973 9.2e-26 119.8 74 74.3
Lsat_1_v5_gn_4_88641 Lactuca sativa HOM05D005491 ORTHO05D006973 2.0e-25 118.6 74 74.3
TAR383G0879 Trochodendron aralioides HOM05D005491 ORTHO05D006973 2.0e-25 118.6 75 72.0
vmacro17061 Vaccinium macrocarpon HOM05D005491 ORTHO05D006973 3.5e-25 117.9 74 73.0
GSVIVG01016137001 Vitis vinifera HOM05D005491 ORTHO05D006973 3.5e-25 117.9 72 77.8
TPR.G38706 Trifolium pratense HOM05D005491 ORTHO05D006973 4.6e-25 117.5 75 74.7
Actinidia31136 Actinidia chinensis HOM05D005491 ORTHO05D006973 6.0e-25 117.1 74 73.0
AUR62025582 Chenopodium quinoa HOM05D005491 ORTHO05D006973 6.0e-25 117.1 74 67.6
Lj3g0002967 Lotus japonicus HOM05D005491 ORTHO05D006973 6.0e-25 117.1 75 73.3
Lalb_Chr04g0264721 Lupinus albus HOM05D005491 ORTHO05D006973 6.0e-25 117.1 75 70.7
Hund18611 Selenicereus undatus HOM05D005491 ORTHO05D006973 6.0e-25 117.1 74 67.6
Atru.chr1.2698 Acer truncatum HOM05D005491 ORTHO05D006973 7.8e-25 116.7 74 73.0
Glyma.08G222600 Glycine max HOM05D005491 ORTHO05D006973 7.8e-25 116.7 75 73.3
Ca_20955_v3 Cicer arietinum L. HOM05D005491 ORTHO05D006973 1.0e-24 116.3 75 73.3
PGR102G1295 Punica granatum HOM05D005491 ORTHO05D006973 1.3e-24 115.9 76 73.7
CARHR097080 Cardamine hirsuta HOM05D005491 ORTHO05D006973 3.0e-24 114.8 74 74.3
Psat7g263520 Pisum sativum HOM05D005491 ORTHO05D006973 3.0e-24 114.8 75 72.0
Sc15g0000930 Simmondsia chinensis HOM05D005491 ORTHO05D006973 3.0e-24 114.8 74 67.6
Peaxi162Scf00038g02533 Petunia axillaris HOM05D005491 ORTHO05D006973 3.9e-24 114.4 75 72.0
arahy.Tifrunner.gnm1.ann1.5V72PU Arachis hypogaea HOM05D005491 ORTHO05D006973 5.0e-24 114.0 75 72.0
Haze_10760 Corylus avellana HOM05D005491 ORTHO05D006973 5.0e-24 114.0 76 71.1
Dinv20356 Davidia involucrata HOM05D005491 ORTHO05D006973 5.0e-24 114.0 74 71.6
Sabra10G0194700 Salix brachista HOM05D005491 ORTHO05D006973 5.0e-24 114.0 68 79.4
Ah.15g094670 Amaranthus hybridus HOM05D005491 ORTHO05D006973 6.6e-24 113.6 74 66.2
Carub.0003s2116 Capsella rubella HOM05D005491 ORTHO05D006973 6.6e-24 113.6 74 75.7
Rhsim12G0214300 Rhododendron simsii HOM05D005491 ORTHO05D006973 6.6e-24 113.6 74 68.9
CANSAT01G1753 Cannabis sativa HOM05D005491 ORTHO05D006973 8.6e-24 113.2 74 68.9
Nitab4.5_0001691g0110 Nicotiana tabacum HOM05D005491 ORTHO05D006973 8.6e-24 113.2 75 70.7
Aa31LG8G7890 Aethionema arabicum HOM05D005491 ORTHO05D006973 1.1e-23 112.8 74 75.7
AT3G21200 Arabidopsis thaliana HOM05D005491 ORTHO05D006973 1.1e-23 112.8 74 74.3
BcaB04g20605 Brassica carinata HOM05D005491 ORTHO05D006973 1.1e-23 112.8 74 74.3
A01p33690 Brassica napus HOM05D005491 ORTHO05D006973 1.1e-23 112.8 74 74.3
CsaV3_3G010780 Cucumis sativus L. HOM05D005491 ORTHO05D006973 1.1e-23 112.8 74 67.6
Ciclev10026115m.g Citrus clementina HOM05D005491 ORTHO05D006973 1.5e-23 112.5 74 74.3
Thhalv10021146m.g Eutrema salsugineum HOM05D005491 ORTHO05D006973 1.5e-23 112.5 74 74.3
Thhalv10021148m.g Eutrema salsugineum HOM05D005491 ORTHO05D006973 1.5e-23 112.5 74 74.3
FvH4_6g37280 Fragaria vesca HOM05D005491 ORTHO05D006973 1.5e-23 112.5 74 66.2
HanXRQChr09g0277401 Helianthus annuus HOM05D005491 ORTHO05D006973 1.5e-23 112.5 74 67.6
RcHm_v2.0_Chr2g0150111 Rosa chinensis HOM05D005491 ORTHO05D006973 1.5e-23 112.5 74 67.6
RcHm_v2.0_Chr3g0481151 Rosa chinensis HOM05D000090 ORTHO05D000083 1.5e-23 112.5 74 67.6
arahy.Tifrunner.gnm1.ann1.S1MR2L Arachis hypogaea HOM05D005491 ORTHO05D006973 1.9e-23 112.1 75 72.0
ClCG05G003150 Citrullus lanatus HOM05D005491 ORTHO05D006973 1.9e-23 112.1 74 66.2
VMungo0647G0411 Vigna mungo HOM05D005491 ORTHO05D006973 1.9e-23 112.1 75 70.7
EL10Ac7g18224 Beta vulgaris HOM05D005491 ORTHO05D006973 2.5e-23 111.7 74 66.2
BcaC09g49056 Brassica carinata HOM05D005491 ORTHO05D006973 2.5e-23 111.7 74 73.0
C01p43060 Brassica napus HOM05D005491 ORTHO05D006973 2.5e-23 111.7 74 73.0
BolC1t04253H Brassica oleracea HOM05D005491 ORTHO05D006973 2.5e-23 111.7 74 73.0
MELO3C006296.2 Cucumis melo HOM05D005491 ORTHO05D006973 2.5e-23 111.7 74 66.2
AL3G35200 Arabidopsis lyrata HOM05D005491 ORTHO05D006973 3.3e-23 111.3 74 73.0
arahy.Tifrunner.gnm1.ann1.PDFG4L Arachis hypogaea HOM05D005491 ORTHO05D006973 3.3e-23 111.3 75 70.7
A05p27490 Brassica napus HOM05D005491 ORTHO05D006973 3.3e-23 111.3 74 73.0
Lj6C21T3 Lonicera japonica HOM05D005491 ORTHO05D006973 3.3e-23 111.3 74 70.3
Nitab4.5_0002885g0050 Nicotiana tabacum HOM05D005491 ORTHO05D006973 3.3e-23 111.3 75 69.3
Sp3g19180 Schrenkiella parvula HOM05D005491 ORTHO05D006973 3.3e-23 111.3 74 73.0
BraA01t03481Z Brassica rapa HOM05D005491 ORTHO05D006973 4.3e-23 110.9 74 73.0
MBI14_g30702_MAGBIO Magnolia biondii HOM05D005491 ORTHO05D006973 4.3e-23 110.9 74 71.6
MD09G1158800 Malus domestica HOM05D005491 ORTHO05D006973 4.3e-23 110.9 74 66.2
Medtr4g006200 Medicago truncatula HOM05D005491 ORTHO05D006973 4.3e-23 110.9 75 68.0
Sed0027406 Sechium edule HOM05D005491 ORTHO05D006973 4.3e-23 110.9 74 63.5
BraA05t21640Z Brassica rapa HOM05D005491 ORTHO05D006973 5.6e-23 110.5 74 73.0
CSS0040638 Camellia sinensis var. sinensis HOM05D005491 ORTHO05D006973 5.6e-23 110.5 74 67.6
BcaC05g28263 Brassica carinata HOM05D005491 ORTHO05D006973 9.5e-23 109.8 74 73.0
C05p42580 Brassica napus HOM05D005491 ORTHO05D006973 9.5e-23 109.8 74 73.0
BolC5t32978H Brassica oleracea HOM05D005491 ORTHO05D006973 9.5e-23 109.8 74 73.0
FAN02G3895 Fragaria x ananassa HOM05D005491 ORTHO05D006973 9.5e-23 109.8 74 64.9
Lj6A3G42 Lonicera japonica HOM05D005491 ORTHO05D006973 9.5e-23 109.8 74 68.9
CAN.G790.23 Capsicum annuum HOM05D005491 ORTHO05D006973 1.2e-22 109.4 75 69.3
TWI18G1464 Tripterygium wilfordii HOM05D005491 ORTHO05D006973 1.2e-22 109.4 74 68.9
Phvul.008G255600 Phaseolus vulgaris HOM05D005491 ORTHO05D006973 1.6e-22 109.0 75 69.3
Sed0002659 Sechium edule HOM05D005491 ORTHO05D006973 2.1e-22 108.6 74 60.8
Nn2g12576 Nelumbo nucifera HOM05D005491 ORTHO05D006973 8.1e-22 106.7 74 68.9
DCAR_007669 Daucus carota HOM05D005491 ORTHO05D006973 1.1e-21 106.3 74 66.2
BcaB06g26202 Brassica carinata HOM05D005491 ORTHO05D006973 1.4e-21 105.9 68 75.0
Solyc03g123880.3 Solanum lycopersicum HOM05D005491 ORTHO05D006973 1.4e-21 105.9 75 65.3
Sopen03g041620 Solanum pennellii HOM05D005491 ORTHO05D006973 1.4e-21 105.9 75 65.3
PGSC0003DMG400009162 Solanum tuberosum HOM05D005491 ORTHO05D006973 1.4e-21 105.9 75 65.3
Cc04_g00370 Coffea canephora HOM05D005491 ORTHO05D006973 2.3e-21 105.1 74 64.9
Migut.D00894 Erythranthe guttata HOM05D005491 ORTHO05D006973 2.3e-21 105.1 74 66.2
Oeu023761.1 Olea europaea HOM05D005491 ORTHO05D006973 2.3e-21 105.1 74 66.2
MSTRG.4527 Avicennia marina HOM05D005491 ORTHO05D006973 4.0e-21 104.4 74 66.2
CDE02G1684 Ceratophyllum demersum HOM05D005491 ORTHO05D006973 8.9e-21 103.2 72 66.7
CDE05G1859 Ceratophyllum demersum HOM05D005491 ORTHO05D006973 8.9e-21 103.2 73 65.8
FAN14G5581 Fragaria x ananassa HOM05D005491 ORTHO05D005725 1.2e-20 102.8 67 67.2
FAN09G1743 Fragaria x ananassa HOM05D005491 ORTHO05D006973 2.0e-20 102.1 67 67.2
ATR0580G202 Amborella trichopoda HOM05D005491 ORTHO05D006973 3.4e-20 101.3 76 63.2
SalBow7G0632 Salvia bowleyana HOM05D005491 ORTHO05D006973 3.4e-20 101.3 74 64.9
SGA_v2.0_scaffold4G02103 Striga asiatica HOM05D005491 ORTHO05D006973 9.9e-20 99.8 74 63.5
PSO063G4509 Papaver somniferum HOM05D005491 ORTHO05D006973 1.3e-19 99.4 76 65.8
PSO782G2961 Papaver somniferum HOM05D005491 ORTHO05D006973 1.3e-19 99.4 76 65.8
CiPaw.02G049600 Carya illinoinensis HOM05D005491 ORTHO05D006973 2.2e-19 98.6 67 70.1
AUR62001366 Chenopodium quinoa HOM05D004422 ORTHO05D007331 4.9e-19 97.4 55 74.5
Zm00001eb170870 Zea mays HOM05D005491 ORTHO05D006973 1.4e-18 95.9 76 64.5
Zm00001eb319280 Zea mays HOM05D005491 ORTHO05D006973 1.9e-18 95.5 76 63.2
THA.LOC104817926 Tarenaya hassleriana HOM05D005491 ORTHO05D006973 7.1e-18 93.6 75 65.3
unitig_8.g3563 Utricularia gibba HOM05D006979 ORTHO05D008857 4.6e-17 90.9 72 56.9
HPP92_013427 Vanilla planifolia HOM05D005491 ORTHO05D006973 1.3e-16 89.4 76 61.8
Aqoxy7G03200 Aquilegia oxysepala HOM05D005491 ORTHO05D006973 3.0e-16 88.2 76 56.6
BcaNung05297 Brassica carinata HOM05D005491 ORTHO05D006973 1.1e-15 86.3 74 62.2
ECA232G0321 Erigeron canadensis HOM05D005491 ORTHO05D006973 7.6e-12 73.6 47 68.1
Mapoly0005s0279 Marchantia polymorpha HOM05D005491 ORTHO05D006973 9.9e-12 73.2 60 53.3
CBR_g22384 Chara braunii HOM05D005491 ORTHO05D006973 1.7e-11 72.4 76 47.4
Pp3c7_5080 Physcomitrium patens HOM05D005491 ORTHO05D006973 4.9e-11 70.9 65 50.8
AagrBONN_evm.TU.Sc2ySwM_368.2001 Anthoceros agrestis HOM05D005491 ORTHO05D006973 1.1e-10 69.7 61 50.8
SMO146G0309 Selaginella moellendorffii HOM05D005491 ORTHO05D006973 1.3e-08 62.8 64 46.9
MCO13G019 Micromonas commoda HOM05D005491 ORTHO05D006973 2.8e-06 55.1 64 39.1


User provided reference genes

Program Settings