Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c36099 Carica papaya HOM05D003845 ORTHO05D004161 2.5e-34 148.3 78 100.0
Duzib133G1200 Durio zibethinus HOM05D003845 ORTHO05D004161 1.6e-25 119.0 75 81.3
Thecc.04G136100 Theobroma cacao HOM05D003845 ORTHO05D004161 3.6e-25 117.9 75 80.0
CiPaw.04G040900 Carya illinoinensis HOM05D003845 ORTHO05D004161 1.8e-24 115.5 75 80.0
Manes.02G067500 Manihot esculenta HOM05D003845 ORTHO05D004161 2.3e-24 115.2 75 78.7
Sc23g0006880 Simmondsia chinensis HOM05D003845 ORTHO05D004161 4.0e-24 114.4 75 76.0
Gohir.A07G071701 Gossypium hirsutum HOM05D003845 ORTHO05D004161 8.8e-24 113.2 75 77.3
Dinv34837 Davidia involucrata HOM05D003845 ORTHO05D004161 1.2e-23 112.8 75 76.0
Gohir.D07G076100 Gossypium hirsutum HOM05D003845 ORTHO05D004161 1.2e-23 112.8 75 77.3
Gorai.001G080300 Gossypium raimondii HOM05D003845 ORTHO05D004161 1.2e-23 112.8 75 77.3
RcHm_v2.0_Chr2g0162941 Rosa chinensis HOM05D003845 ORTHO05D004161 1.5e-23 112.5 75 76.0
CANSAT64G2814 Cannabis sativa HOM05D003845 ORTHO05D004161 2.6e-23 111.7 75 77.3
Dinv33933 Davidia involucrata HOM05D003845 ORTHO05D004161 2.6e-23 111.7 75 76.0
FAN02G2813 Fragaria x ananassa HOM05D003845 ORTHO05D004161 2.6e-23 111.7 75 76.0
GSVIVG01031064001 Vitis vinifera HOM05D003845 ORTHO05D004161 4.4e-23 110.9 75 74.7
AUR62008978 Chenopodium quinoa HOM05D003845 ORTHO05D004161 5.7e-23 110.5 75 72.0
AUR62014525 Chenopodium quinoa HOM05D003845 ORTHO05D004161 5.7e-23 110.5 75 72.0
TWI53G0876 Tripterygium wilfordii HOM05D003845 ORTHO05D004161 5.7e-23 110.5 75 76.0
Phvul.008G004700 Phaseolus vulgaris HOM05D003845 ORTHO05D004161 9.8e-23 109.8 75 72.0
Potri.004G101250 Populus trichocarpa HOM05D003845 ORTHO05D004161 9.8e-23 109.8 75 73.3
TAR629G0674 Trochodendron aralioides HOM05D003845 ORTHO05D004161 9.8e-23 109.8 74 74.3
Atru.chr8.887 Acer truncatum HOM05D003845 ORTHO05D004161 1.3e-22 109.4 75 74.7
Actinidia36313 Actinidia chinensis HOM05D003845 ORTHO05D004161 1.3e-22 109.4 75 74.7
CSS0012709 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 1.3e-22 109.4 75 76.0
VMungo1383G2489 Vigna mungo HOM05D003845 ORTHO05D004161 1.3e-22 109.4 75 72.0
Nn4g23790 Nelumbo nucifera HOM05D003845 ORTHO05D004161 1.7e-22 109.0 75 73.3
RcHm_v2.0_Chr2g0163391 Rosa chinensis HOM05D003845 ORTHO05D004161 1.7e-22 109.0 66 84.8
MELO3C022095.2 Cucumis melo HOM05D003845 ORTHO05D004161 2.2e-22 108.6 75 73.3
CsaV3_5G039200 Cucumis sativus L. HOM05D003845 ORTHO05D004161 2.2e-22 108.6 75 73.3
Cc07_g08900 Coffea canephora HOM05D003845 ORTHO05D004161 2.8e-22 108.2 75 74.7
Lsat_1_v5_gn_4_153700 Lactuca sativa HOM05D003845 ORTHO05D004161 2.8e-22 108.2 75 77.3
Sed0012635 Sechium edule HOM05D003845 ORTHO05D004161 2.8e-22 108.2 75 73.3
FvH4_6g45230 Fragaria vesca HOM05D003845 ORTHO05D004161 4.9e-22 107.5 75 73.3
FAN14G4373 Fragaria x ananassa HOM05D003845 ORTHO05D004161 4.9e-22 107.5 75 73.3
Sp5g22090 Schrenkiella parvula HOM05D003845 ORTHO05D004161 4.9e-22 107.5 75 72.0
THA.LOC104805559 Tarenaya hassleriana HOM05D003845 ORTHO05D004161 4.9e-22 107.5 75 72.0
Lj2C445T15 Lonicera japonica HOM05D003845 ORTHO05D004161 6.3e-22 107.1 66 83.3
EL10Ac2g04592 Beta vulgaris HOM05D003845 ORTHO05D004161 8.3e-22 106.7 75 72.0
Glyma.18G297900 Glycine max HOM05D003845 ORTHO05D004161 8.3e-22 106.7 75 70.7
ECA232G1957 Erigeron canadensis HOM05D003845 ORTHO05D004161 1.1e-21 106.3 75 74.7
CSS0018407 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 1.8e-21 105.5 66 83.3
Thhalv10017993m.g Eutrema salsugineum HOM05D003845 ORTHO05D004161 1.8e-21 105.5 75 72.0
MD12G1002400 Malus domestica HOM05D003845 ORTHO05D004161 1.8e-21 105.5 75 74.7
Prupe.7G002300 Prunus persica HOM05D003845 ORTHO05D004161 1.8e-21 105.5 75 74.7
Rhsim09G0080700 Rhododendron simsii HOM05D003845 ORTHO05D004161 2.4e-21 105.1 66 81.8
AT1G67140 Arabidopsis thaliana HOM05D003845 ORTHO05D004161 3.1e-21 104.8 75 72.0
Lalb_Chr21g0317871 Lupinus albus HOM05D003845 ORTHO05D004161 3.1e-21 104.8 75 70.7
CAN.G625.4 Capsicum annuum HOM05D003845 ORTHO05D004161 4.1e-21 104.4 75 68.0
Lj1g0009000 Lotus japonicus HOM05D003845 ORTHO05D004161 4.1e-21 104.4 75 68.0
MD14G1001900 Malus domestica HOM05D003845 ORTHO05D004161 4.1e-21 104.4 75 73.3
vmacro05567 Vaccinium macrocarpon HOM05D003845 ORTHO05D004161 4.1e-21 104.4 75 72.0
Medtr7g406950 Medicago truncatula HOM05D003845 ORTHO05D004161 5.4e-21 104.0 75 68.0
Hund16134 Selenicereus undatus HOM05D003845 ORTHO05D004161 5.4e-21 104.0 75 68.0
Aa31LG2G3530 Aethionema arabicum HOM05D003845 ORTHO05D004161 7.0e-21 103.6 75 70.7
Ca_03194_v3 Cicer arietinum L. HOM05D003845 ORTHO05D003700 9.1e-21 103.2 66 78.8
Eucgr.F02484 Eucalyptus grandis HOM05D003845 ORTHO05D004161 9.1e-21 103.2 75 68.0
Solyc02g085810.3 Solanum lycopersicum HOM05D003845 ORTHO05D004161 9.1e-21 103.2 75 66.7
Sopen02g030490 Solanum pennellii HOM05D003845 ORTHO05D004161 9.1e-21 103.2 75 66.7
PGR004G1392 Punica granatum HOM05D003845 ORTHO05D004161 1.6e-20 102.4 75 68.0
Hma1.2p1_0136F.1_g062170 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 2.0e-20 102.1 75 69.3
Hma1.2p1_0136F.1_g062180 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 2.0e-20 102.1 75 69.3
Oeu052985.1 Olea europaea HOM05D003845 ORTHO05D004161 2.0e-20 102.1 75 69.3
C06p43130 Brassica napus HOM05D003845 ORTHO05D004161 2.7e-20 101.7 75 70.7
BolC6t39126H Brassica oleracea HOM05D003845 ORTHO05D004161 2.7e-20 101.7 75 70.7
BraA07t31006Z Brassica rapa HOM05D003845 ORTHO05D004161 2.7e-20 101.7 75 70.7
AL2G25520 Arabidopsis lyrata HOM05D003845 ORTHO05D004161 3.5e-20 101.3 75 70.7
QL02p051715 Quercus lobata HOM05D003845 ORTHO05D004161 3.5e-20 101.3 69 73.9
HanXRQChr14g0438731 Helianthus annuus HOM05D003845 ORTHO05D004161 5.9e-20 100.5 75 72.0
A07p33800 Brassica napus HOM05D003845 ORTHO05D004161 1.0e-19 99.8 75 69.3
Migut.H00208 Erythranthe guttata HOM05D003845 ORTHO05D004161 1.0e-19 99.8 75 68.0
Carub.0002s1343 Capsella rubella HOM05D003845 ORTHO05D004161 1.7e-19 99.0 75 68.0
SGA_v2.0_scaffold33G13453 Striga asiatica HOM05D003845 ORTHO05D004161 1.9e-18 95.5 75 64.0
PSO782G1231 Papaver somniferum HOM05D003845 ORTHO05D004161 4.2e-18 94.4 75 62.7
Aqoxy3G03940 Aquilegia oxysepala HOM05D003845 ORTHO05D004161 9.5e-18 93.2 75 61.3
PSO063G7466 Papaver somniferum HOM05D003845 ORTHO05D004161 9.5e-18 93.2 75 62.7
ClCG11G005430 Citrullus lanatus HOM05D003845 ORTHO05D004161 2.1e-17 92.0 58 81.0
ATR0564G046 Amborella trichopoda HOM05D003845 ORTHO05D004161 4.7e-17 90.9 74 60.8
Peaxi162Scf00814g00242 Petunia axillaris HOM05D003845 ORTHO05D004161 6.1e-17 90.5 56 78.6
Ah.10g037590 Amaranthus hybridus HOM05D003845 ORTHO05D004161 2.0e-15 85.5 59 67.8
CDE02G0049 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 2.6e-15 85.1 75 57.3
arahy.Tifrunner.gnm1.ann1.4V7WUF Arachis hypogaea HOM05D003845 ORTHO05D004161 3.4e-15 84.7 75 60.0
arahy.Tifrunner.gnm1.ann1.UJVA95 Arachis hypogaea HOM05D003845 ORTHO05D004161 3.4e-15 84.7 75 60.0
SHI17842 Sapria himalayana HOM05D003845 ORTHO05D004161 9.8e-15 83.2 62 66.1
Os06g0505302 Oryza sativa ssp. japonica HOM05D003845 ORTHO05D004161 2.9e-14 81.6 75 53.3
TPR.G40067 Trifolium pratense HOM05D003845 ORTHO05D004161 2.9e-14 81.6 50 82.0
HPP92_003934 Vanilla planifolia HOM05D003845 ORTHO05D004161 2.9e-14 81.6 75 56.0
HPP92_003935 Vanilla planifolia HOM05D003845 ORTHO05D004161 2.9e-14 81.6 75 56.0
Nitab4.5_0001569g0050 Nicotiana tabacum HOM05D003845 ORTHO05D004161 3.7e-14 81.3 59 66.1
Nitab4.5_0002288g0020 Nicotiana tabacum HOM05D003845 ORTHO05D004161 6.3e-14 80.5 50 78.0
SalBow3G0178 Salvia bowleyana HOM05D003845 ORTHO05D004161 8.3e-14 80.1 123 42.3
EL10Ac2g04610 Beta vulgaris HOM05D003845 ORTHO05D004161 3.2e-13 78.2 59 67.8
Lsat_1_v5_gn_4_153641 Lactuca sativa HOM05D003845 ORTHO05D004161 4.1e-13 77.8 68 61.8
unitig_899.g14510 Utricularia gibba HOM05D003845 ORTHO05D004161 4.6e-12 74.3 59 62.7
Zm00001eb382690 Zea mays HOM05D003845 ORTHO05D004161 2.3e-11 72.0 75 48.0
CBR_g31193 Chara braunii HOM05D003845 ORTHO05D004161 2.0e-07 58.9 75 41.3
Pp3c15_3000 Physcomitrium patens HOM05D003845 ORTHO05D004161 1.7e-06 55.8 75 40.0
SMO239G0031 Selaginella moellendorffii HOM05D003845 ORTHO05D004161 4.9e-06 54.3 75 41.3


User provided reference genes

Program Settings