Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c35855 Carica papaya HOM05D000572 ORTHO05D028562 1.4e-69 266.2 133 100.0
Ah.13g073920 Amaranthus hybridus HOM05D000572 ORTHO05D000840 1.0e-19 100.5 51 94.1
Atru.chr4.2505 Acer truncatum HOM05D000572 ORTHO05D000840 1.7e-19 99.8 51 96.1
EL10Ac3g06440 Beta vulgaris HOM05D000572 ORTHO05D000840 2.9e-19 99.0 51 92.2
ClCG06G006050 Citrullus lanatus HOM05D000572 ORTHO05D000840 2.9e-19 99.0 51 94.1
MELO3C014487.2 Cucumis melo HOM05D000572 ORTHO05D000840 2.9e-19 99.0 51 94.1
CsaV3_6G038240 Cucumis sativus L. HOM05D000572 ORTHO05D000840 2.9e-19 99.0 51 94.1
Sed0013775 Sechium edule HOM05D000572 ORTHO05D000840 2.9e-19 99.0 51 94.1
Manes.15G027000 Manihot esculenta HOM05D000572 ORTHO05D000840 3.8e-19 98.6 81 65.4
Aqoxy2G03356 Aquilegia oxysepala HOM05D000572 ORTHO05D000840 5.0e-19 98.2 81 66.7
CiPaw.01G164100 Carya illinoinensis HOM05D000572 ORTHO05D000840 5.0e-19 98.2 81 65.4
Lalb_Chr09g0319771 Lupinus albus HOM05D000572 ORTHO05D000840 5.0e-19 98.2 81 65.4
Hund22744 Selenicereus undatus HOM05D000572 ORTHO05D000840 5.0e-19 98.2 81 64.2
FAN12G4122 Fragaria x ananassa HOM05D000572 ORTHO05D000840 6.6e-19 97.8 51 94.1
Sed0002312 Sechium edule HOM05D000572 ORTHO05D000840 6.6e-19 97.8 51 92.2
Nitab4.5_0000795g0040 Nicotiana tabacum HOM05D000572 ORTHO05D000840 8.6e-19 97.4 81 66.7
Nitab4.5_0008386g0010 Nicotiana tabacum HOM05D000572 ORTHO05D000840 8.6e-19 97.4 81 66.7
Sc19g0004290 Simmondsia chinensis HOM05D000572 ORTHO05D000840 8.6e-19 97.4 51 92.2
FvH4_4g15130 Fragaria vesca HOM05D000572 ORTHO05D000840 1.5e-18 96.7 51 92.2
FAN07G2506 Fragaria x ananassa HOM05D000572 ORTHO05D000840 1.5e-18 96.7 51 92.2
FAN17G2497 Fragaria x ananassa HOM05D000572 ORTHO05D000840 1.5e-18 96.7 51 92.2
Glyma.01G239000 Glycine max HOM05D000572 ORTHO05D000840 1.5e-18 96.7 51 92.2
Phvul.002G047000 Phaseolus vulgaris HOM05D000572 ORTHO05D000840 1.5e-18 96.7 51 92.2
VMungo1215G0056 Vigna mungo HOM05D000572 ORTHO05D000840 1.5e-18 96.7 51 92.2
Actinidia36979 Actinidia chinensis HOM05D000572 ORTHO05D000840 1.9e-18 96.3 81 65.4
arahy.Tifrunner.gnm1.ann1.F09UNA Arachis hypogaea HOM05D000572 ORTHO05D000840 1.9e-18 96.3 51 90.2
arahy.Tifrunner.gnm1.ann1.V66FSB Arachis hypogaea HOM05D000572 ORTHO05D000840 1.9e-18 96.3 51 90.2
BolC7t44710H Brassica oleracea HOM05D000572 ORTHO05D000840 1.9e-18 96.3 50 92.0
CSS0034253 Camellia sinensis var. sinensis HOM05D000572 ORTHO05D000840 1.9e-18 96.3 81 65.4
Dinv44509 Davidia involucrata HOM05D000572 ORTHO05D000840 1.9e-18 96.3 81 65.4
Lj3A740G52 Lonicera japonica HOM05D000572 ORTHO05D000840 1.9e-18 96.3 81 65.4
Lj1g0004536 Lotus japonicus HOM05D000572 ORTHO05D000840 1.9e-18 96.3 81 65.4
PSO170G4847 Papaver somniferum HOM05D000572 ORTHO05D000840 1.9e-18 96.3 81 65.4
PSO302G0089 Papaver somniferum HOM05D000572 ORTHO05D000840 1.9e-18 96.3 81 65.4
QL06p003211 Quercus lobata HOM05D000572 ORTHO05D000840 1.9e-18 96.3 81 65.4
Rhsim02G0022800 Rhododendron simsii HOM05D000572 ORTHO05D000840 1.9e-18 96.3 81 65.4
RcHm_v2.0_Chr4g0416741 Rosa chinensis HOM05D000572 ORTHO05D000840 1.9e-18 96.3 81 65.4
Solyc09g075800.4 Solanum lycopersicum HOM05D000572 ORTHO05D000840 1.9e-18 96.3 81 65.4
Sopen09g030610 Solanum pennellii HOM05D000572 ORTHO05D000840 1.9e-18 96.3 81 65.4
TPR.G37927 Trifolium pratense HOM05D000572 ORTHO05D000840 1.9e-18 96.3 81 65.4
unitig_22.g6328 Utricularia gibba HOM05D000572 ORTHO05D000840 1.9e-18 96.3 51 92.2
vmacro15328 Vaccinium macrocarpon HOM05D000572 ORTHO05D000840 1.9e-18 96.3 81 65.4
AL6G38250 Arabidopsis lyrata HOM05D000572 ORTHO05D000840 2.5e-18 95.9 80 65.0
AT5G26240 Arabidopsis thaliana HOM05D000572 ORTHO05D000840 2.5e-18 95.9 80 65.0
BcaNung02813 Brassica carinata HOM05D000572 ORTHO05D000840 2.5e-18 95.9 80 65.0
BcaNung03971 Brassica carinata HOM05D000572 ORTHO05D000840 2.5e-18 95.9 80 65.0
A06p36740 Brassica napus HOM05D000572 ORTHO05D000840 2.5e-18 95.9 80 65.0
C07p41790 Brassica napus HOM05D000572 ORTHO05D000840 2.5e-18 95.9 80 65.0
BraA06t26596Z Brassica rapa HOM05D000572 ORTHO05D000840 2.5e-18 95.9 80 65.0
Carub.0006s2406 Capsella rubella HOM05D000572 ORTHO05D000840 2.5e-18 95.9 80 65.0
Thhalv10003643m.g Eutrema salsugineum HOM05D000572 ORTHO05D000840 2.5e-18 95.9 80 65.0
Nn1g02253 Nelumbo nucifera HOM05D000572 ORTHO05D000840 2.5e-18 95.9 81 64.2
Sabra10G0053200 Salix brachista HOM05D000572 ORTHO05D000840 2.5e-18 95.9 81 64.2
Sp2g21510 Schrenkiella parvula HOM05D000572 ORTHO05D000840 2.5e-18 95.9 80 65.0
THA.LOC104802763 Tarenaya hassleriana HOM05D000572 ORTHO05D000840 2.5e-18 95.9 80 65.0
THA.LOC104818777 Tarenaya hassleriana HOM05D000572 ORTHO05D000840 2.5e-18 95.9 80 65.0
Medtr5g005990 Medicago truncatula HOM05D000572 ORTHO05D000840 3.3e-18 95.5 81 65.4
Psat4g212280 Pisum sativum HOM05D000572 ORTHO05D000840 3.3e-18 95.5 81 65.4
Zm00001eb053800 Zea mays HOM05D000572 ORTHO05D000840 3.3e-18 95.5 81 65.4
CAN.G907.24 Capsicum annuum HOM05D000572 ORTHO05D000840 4.2e-18 95.1 51 90.2
Migut.N00173 Erythranthe guttata HOM05D000572 ORTHO05D000840 4.2e-18 95.1 81 63.0
Glyma.11G004600 Glycine max HOM05D000572 ORTHO05D000840 4.2e-18 95.1 51 88.2
TWI09G1185 Tripterygium wilfordii HOM05D000572 ORTHO05D000840 4.2e-18 95.1 81 64.2
TWI73G0146 Tripterygium wilfordii HOM05D000572 ORTHO05D000840 4.2e-18 95.1 81 64.2
TAR636G1672 Trochodendron aralioides HOM05D000572 ORTHO05D000840 4.2e-18 95.1 81 64.2
Aa31LG11G10300 Aethionema arabicum HOM05D000572 ORTHO05D000840 5.5e-18 94.7 80 63.8
arahy.Tifrunner.gnm1.ann1.SGT6TA Arachis hypogaea HOM05D000572 ORTHO05D000840 7.2e-18 94.4 81 63.0
Eucgr.F01498 Eucalyptus grandis HOM05D000572 ORTHO05D000840 7.2e-18 94.4 81 63.0
MBI04_g17680_MAGBIO Magnolia biondii HOM05D000572 ORTHO05D000840 7.2e-18 94.4 81 63.0
MBI04_g33422_MAGBIO Magnolia biondii HOM05D000572 ORTHO05D000840 7.2e-18 94.4 81 63.0
Peaxi162Scf00437g00326 Petunia axillaris HOM05D000572 ORTHO05D000840 7.2e-18 94.4 81 64.2
CiPaw.02G095700 Carya illinoinensis HOM05D000572 ORTHO05D000840 9.5e-18 94.0 81 63.0
Ciclev10004375m.g Citrus clementina HOM05D000572 ORTHO05D000840 9.5e-18 94.0 81 64.2
Prupe.1G156000 Prunus persica HOM05D000572 ORTHO05D000840 9.5e-18 94.0 81 64.2
PGR004G2523 Punica granatum HOM05D000572 ORTHO05D000840 9.5e-18 94.0 81 63.0
MSTRG.21845 Avicennia marina HOM05D000572 ORTHO05D000840 1.2e-17 93.6 51 88.2
Ca_24388_v3 Cicer arietinum L. HOM05D000572 ORTHO05D000840 1.2e-17 93.6 50 90.0
ECA240G0830 Erigeron canadensis HOM05D000572 ORTHO05D000840 1.2e-17 93.6 81 63.0
SalBow5G2083 Salvia bowleyana HOM05D000572 ORTHO05D000840 1.2e-17 93.6 51 88.2
SalBow5G5613 Salvia bowleyana HOM05D000572 ORTHO05D000840 1.2e-17 93.6 51 88.2
GSVIVG01017933001 Vitis vinifera HOM05D000572 ORTHO05D000840 1.2e-17 93.6 81 63.0
ATR0332G025 Amborella trichopoda HOM05D000572 ORTHO05D000840 1.6e-17 93.2 81 61.7
Cc03_g03520 Coffea canephora HOM05D000572 ORTHO05D000840 1.6e-17 93.2 81 63.0
DCAR_027188 Daucus carota HOM05D000572 ORTHO05D000840 1.6e-17 93.2 81 64.2
MD13G1188900 Malus domestica HOM05D000572 ORTHO05D000840 1.6e-17 93.2 81 64.2
Nn4g26268 Nelumbo nucifera HOM05D000572 ORTHO05D000840 1.6e-17 93.2 81 64.2
CDE05G0240 Ceratophyllum demersum HOM05D000572 ORTHO05D000840 2.1e-17 92.8 81 61.7
Haze_00923 Corylus avellana HOM05D000572 ORTHO05D000840 2.1e-17 92.8 81 63.0
MD16G1189700 Malus domestica HOM05D000572 ORTHO05D000840 2.1e-17 92.8 81 63.0
Actinidia08504 Actinidia chinensis HOM05D000572 ORTHO05D000840 2.8e-17 92.4 81 63.0
CANSAT78G1323 Cannabis sativa HOM05D000572 ORTHO05D000840 2.8e-17 92.4 81 61.7
Cfa015621 Carpinus fangiana HOM05D000572 ORTHO05D000840 2.8e-17 92.4 81 63.0
HPP92_024872 Vanilla planifolia HOM05D000572 ORTHO05D000840 2.8e-17 92.4 81 60.5
Duzib151G0489 Durio zibethinus HOM05D000572 ORTHO05D000840 3.6e-17 92.0 81 63.0
Thecc.04G227900 Theobroma cacao HOM05D000572 ORTHO05D000840 3.6e-17 92.0 81 63.0
Gorai.011G168600 Gossypium raimondii HOM05D000572 ORTHO05D000840 4.7e-17 91.7 81 61.7
Dinv38429 Davidia involucrata HOM05D000572 ORTHO05D000840 6.1e-17 91.3 81 63.0
HanXRQChr10g0303141 Helianthus annuus HOM05D000572 ORTHO05D000840 6.1e-17 91.3 81 63.0
Lsat_1_v5_gn_2_74800 Lactuca sativa HOM05D000572 ORTHO05D028562 6.1e-17 91.3 81 63.0
Lsat_1_v5_gn_7_65741 Lactuca sativa HOM05D000572 ORTHO05D000840 6.1e-17 91.3 81 63.0
Oeu034362.1 Olea europaea HOM05D000572 ORTHO05D000840 6.1e-17 91.3 81 63.0
Gohir.A01G023500 Gossypium hirsutum HOM05D000572 ORTHO05D000840 8.0e-17 90.9 81 61.7
Gohir.D01G021500 Gossypium hirsutum HOM05D000572 ORTHO05D000840 8.0e-17 90.9 81 61.7
Gorai.002G024000 Gossypium raimondii HOM05D000572 ORTHO05D000840 8.0e-17 90.9 81 61.7
Potri.010G090100 Populus trichocarpa HOM05D000572 ORTHO05D000840 8.0e-17 90.9 81 64.2
COL.COLO4_06192 Corchorus olitorius HOM05D000572 ORTHO05D000840 1.0e-16 90.5 81 61.7
Duzib212G0457 Durio zibethinus HOM05D000572 ORTHO05D000840 1.4e-16 90.1 81 61.7
arahy.Tifrunner.gnm1.ann1.F4UJXV Arachis hypogaea HOM05D000572 ORTHO05D000840 2.3e-16 89.4 50 84.0
arahy.Tifrunner.gnm1.ann1.HENQ4G Arachis hypogaea HOM05D000572 ORTHO05D000840 4.0e-16 88.6 51 84.3
Gohir.D10G151400 Gossypium hirsutum HOM05D000572 ORTHO05D000840 5.2e-16 88.2 81 60.5
SEGI_35846 Sequoiadendron giganteum HOM05D000572 ORTHO05D000840 1.2e-15 87.0 80 57.5
Gohir.A10G115100 Gossypium hirsutum HOM05D000572 ORTHO05D000840 5.7e-15 84.7 48 85.4
Lsat_1_v5_gn_6_42661 Lactuca sativa HOM05D000572 ORTHO05D020279 1.3e-14 83.6 81 59.3
Mapoly0061s0111 Marchantia polymorpha HOM05D000572 ORTHO05D000840 4.9e-14 81.6 80 53.8
SGA_v2.0_scaffold10G05099 Striga asiatica HOM05D000572 ORTHO05D000840 1.1e-13 80.5 44 84.1
Lsat_1_v5_gn_3_136481 Lactuca sativa HOM05D000572 ORTHO05D028562 1.8e-13 79.7 51 78.4
Pp3c23_11120 Physcomitrium patens HOM05D000572 ORTHO05D000840 3.2e-13 79.0 81 53.1
SMO358G0691 Selaginella moellendorffii HOM05D000572 ORTHO05D000840 5.4e-13 78.2 80 51.2
Pp3c23_5320 Physcomitrium patens HOM05D000572 ORTHO05D000840 3.5e-12 75.5 81 50.6
CBR_g3563 Chara braunii HOM05D000572 ORTHO05D000840 1.7e-11 73.2 54 63.0
AagrBONN_evm.TU.Sc2ySwM_228.2587 Anthoceros agrestis HOM05D000572 ORTHO05D000840 3.9e-11 72.0 81 51.9
PRCOL_00001482 Prasinoderma coloniale HOM05D000572 ORTHO05D000840 8.9e-08 60.8 51 49.0
Pp3c2_27650 Physcomitrium patens HOM05D000572 ORTHO05D000840 2.0e-07 59.7 47 53.2
CBR_g34307 Chara braunii HOM05D000572 ORTHO05D000840 8.3e-06 54.3 52 51.9
Cre01.g038700 Chlamydomonas reinhardtii HOM05D000572 ORTHO05D000840 8.3e-06 54.3 76 40.8
Mapoly0100s0037 Marchantia polymorpha HOM05D000572 ORTHO05D000840 8.3e-06 54.3 47 51.1


User provided reference genes

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