Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c35819 Carica papaya HOM05D006541 ORTHO05D008471 1.1e-207 726.5 376 100.0
Ciclev10020397m.g Citrus clementina HOM05D006541 ORTHO05D008471 1.7e-141 506.5 365 72.9
QL10p016702 Quercus lobata HOM05D006541 ORTHO05D008471 1.5e-140 503.4 371 72.5
Haze_07335 Corylus avellana HOM05D006541 ORTHO05D008471 2.5e-140 502.7 371 73.0
Cfa018953 Carpinus fangiana HOM05D006541 ORTHO05D008471 1.6e-139 500.0 371 72.2
Duzib205G0457 Durio zibethinus HOM05D006541 ORTHO05D008471 4.0e-138 495.4 368 71.7
Atru.chr9.2260 Acer truncatum HOM05D006541 ORTHO05D008471 2.0e-137 493.0 370 70.3
Gohir.A03G066400 Gossypium hirsutum HOM05D006541 ORTHO05D008471 7.5e-137 491.1 359 73.0
Thecc.03G085100 Theobroma cacao HOM05D006541 ORTHO05D008471 4.1e-135 485.3 368 71.2
Manes.06G093400 Manihot esculenta HOM05D006541 ORTHO05D008471 5.4e-135 485.0 360 73.9
GSVIVG01008019001 Vitis vinifera HOM05D006541 ORTHO05D008471 1.3e-133 480.3 371 68.7
Dinv38701 Davidia involucrata HOM05D006541 ORTHO05D008471 1.7e-133 479.9 370 69.5
VMungo1215G1397 Vigna mungo HOM05D006541 ORTHO05D008471 1.9e-132 476.5 369 69.6
Gorai.003G096900 Gossypium raimondii HOM05D006541 ORTHO05D008471 2.8e-131 472.6 401 65.6
CiPaw.11G043400 Carya illinoinensis HOM05D006541 ORTHO05D008471 6.2e-131 471.5 358 70.9
MD14G1199100 Malus domestica HOM05D006541 ORTHO05D008471 1.4e-130 470.3 371 66.6
Prupe.5G192200 Prunus persica HOM05D006541 ORTHO05D008471 1.8e-130 469.9 371 68.5
ClCG04G012330 Citrullus lanatus HOM05D006541 ORTHO05D008471 3.1e-130 469.2 377 67.6
Phvul.003G190700 Phaseolus vulgaris HOM05D006541 ORTHO05D008471 4.0e-130 468.8 369 68.6
TAR629G1448 Trochodendron aralioides HOM05D006541 ORTHO05D008471 5.2e-130 468.4 368 67.1
MELO3C001974.2 Cucumis melo HOM05D006541 ORTHO05D008471 8.9e-130 467.6 366 69.1
TAR371G1054 Trochodendron aralioides HOM05D006541 ORTHO05D008471 8.9e-130 467.6 375 66.7
arahy.Tifrunner.gnm1.ann1.84ES4F Arachis hypogaea HOM05D006541 ORTHO05D008471 3.4e-129 465.7 371 66.6
arahy.Tifrunner.gnm1.ann1.ZY6HCY Arachis hypogaea HOM05D006541 ORTHO05D008471 5.8e-129 464.9 371 66.8
RcHm_v2.0_Chr7g0181151 Rosa chinensis HOM05D006541 ORTHO05D008471 7.5e-129 464.5 368 67.4
CsaV3_1G005390 Cucumis sativus L. HOM05D006541 ORTHO05D008471 1.3e-128 463.8 358 69.8
TWI60G0844 Tripterygium wilfordii HOM05D006541 ORTHO05D008471 1.1e-127 460.7 367 67.0
Glyma.17G099300 Glycine max HOM05D006541 ORTHO05D008471 2.4e-127 459.5 369 66.9
Gohir.D03G093000 Gossypium hirsutum HOM05D006541 ORTHO05D008471 2.4e-127 459.5 368 68.2
Psat4g051480 Pisum sativum HOM05D006541 ORTHO05D008471 3.5e-126 455.7 364 66.2
Ca_21826_v3 Cicer arietinum L. HOM05D006541 ORTHO05D008471 5.1e-125 451.8 365 67.1
Lj4g0004556 Lotus japonicus HOM05D006541 ORTHO05D008471 8.6e-125 451.1 368 66.3
Nn4g23149 Nelumbo nucifera HOM05D006541 ORTHO05D008471 2.8e-123 446.0 370 63.2
Lj5A111T86 Lonicera japonica HOM05D006541 ORTHO05D008471 6.2e-123 444.9 358 67.0
Medtr4g108590 Medicago truncatula HOM05D006541 ORTHO05D008471 3.1e-122 442.6 376 63.8
THA.LOC104821445 Tarenaya hassleriana HOM05D006541 ORTHO05D008471 6.8e-122 441.4 361 64.8
Hma1.2p1_0104F.1_g049970 Hydrangea macrophylla HOM05D006541 ORTHO05D008471 5.8e-121 438.3 352 67.3
FAN18G0374 Fragaria x ananassa HOM05D006541 ORTHO05D008471 1.3e-120 437.2 370 63.5
FAN04G2599 Fragaria x ananassa HOM05D006541 ORTHO05D008471 2.9e-120 436.0 370 63.2
MD06G1192400 Malus domestica HOM05D006541 ORTHO05D008471 3.7e-120 435.6 403 60.5
Lalb_Chr07g0178001 Lupinus albus HOM05D006541 ORTHO05D008471 8.4e-120 434.5 351 66.1
Sabra12G0049100 Salix brachista HOM05D006541 ORTHO05D008471 7.1e-119 431.4 435 57.7
FAN08G2919 Fragaria x ananassa HOM05D006541 ORTHO05D008471 1.6e-118 430.3 370 63.2
COL.COLO4_24520 Corchorus olitorius HOM05D000087 ORTHO05D008471 2.1e-118 429.9 349 67.9
Eucgr.B00491 Eucalyptus grandis HOM05D006541 ORTHO05D008471 2.3e-117 426.4 377 62.3
MBI05_g08285_MAGBIO Magnolia biondii HOM05D006541 ORTHO05D008471 3.0e-117 426.0 372 60.2
Sed0004898 Sechium edule HOM05D006541 ORTHO05D008471 8.6e-117 424.5 363 64.2
PGR083G1696 Punica granatum HOM05D006541 ORTHO05D008471 1.9e-116 423.3 365 63.0
Rhsim08G0155500 Rhododendron simsii HOM05D006541 ORTHO05D008471 5.6e-116 421.8 330 67.0
PSO063G0566 Papaver somniferum HOM05D006541 ORTHO05D008471 7.3e-116 421.4 370 60.5
FvH4_5g15050 Fragaria vesca HOM05D006541 ORTHO05D008471 2.8e-115 419.5 370 61.6
DCAR_016545 Daucus carota HOM05D006541 ORTHO05D008471 1.8e-114 416.8 355 62.3
AL5G26900 Arabidopsis lyrata HOM05D006541 ORTHO05D008471 3.1e-114 416.0 374 61.0
AT3G47610 Arabidopsis thaliana HOM05D006541 ORTHO05D008471 3.4e-113 412.5 374 60.7
BolC3t19470H Brassica oleracea HOM05D006541 ORTHO05D008471 4.4e-113 412.1 362 61.6
BcaB01g00902 Brassica carinata HOM05D006541 ORTHO05D008471 5.8e-113 411.8 363 61.4
Nitab4.5_0000842g0050 Nicotiana tabacum HOM05D006541 ORTHO05D008471 5.8e-113 411.8 393 58.0
TPR.G34732 Trifolium pratense HOM05D006541 ORTHO05D008471 5.8e-113 411.8 384 60.2
Carub.0005s1374 Capsella rubella HOM05D006541 ORTHO05D008471 2.9e-112 409.5 370 60.0
Nitab4.5_0012137g0020 Nicotiana tabacum HOM05D006541 ORTHO05D008471 3.8e-112 409.1 393 57.8
Hund02657 Selenicereus undatus HOM05D006541 ORTHO05D008471 6.4e-112 408.3 377 60.5
Cc04_g16740 Coffea canephora HOM05D006541 ORTHO05D008471 1.9e-111 406.8 358 62.3
Oeu006508.1 Olea europaea HOM05D006541 ORTHO05D008471 2.4e-111 406.4 357 64.7
A06p20010 Brassica napus HOM05D006541 ORTHO05D008471 3.2e-111 406.0 362 61.6
BraA06t25087Z Brassica rapa HOM05D006541 ORTHO05D008471 3.2e-111 406.0 362 61.6
Sp5g14300 Schrenkiella parvula HOM05D006541 ORTHO05D008471 4.2e-111 405.6 362 61.6
CAN.G837.10 Capsicum annuum HOM05D006541 ORTHO05D008471 5.4e-111 405.2 391 57.3
Hma1.2p1_0104F.1_g049980 Hydrangea macrophylla HOM05D006541 ORTHO05D008471 5.4e-111 405.2 330 67.3
BcaC01g01798 Brassica carinata HOM05D006541 ORTHO05D008471 1.6e-110 403.7 362 60.8
C03p71820 Brassica napus HOM05D006541 ORTHO05D008471 1.6e-110 403.7 362 60.8
Thhalv10010423m.g Eutrema salsugineum HOM05D006541 ORTHO05D008471 2.1e-110 403.3 364 61.8
Peaxi162Scf00274g00732 Petunia axillaris HOM05D006541 ORTHO05D008471 2.1e-110 403.3 386 59.1
CARHR156290 Cardamine hirsuta HOM05D006541 ORTHO05D008471 7.8e-110 401.4 368 60.1
Sopen03g035110 Solanum pennellii HOM05D006541 ORTHO05D008471 7.8e-110 401.4 387 58.1
Potri.012G068900 Populus trichocarpa HOM05D006541 ORTHO05D008471 1.7e-109 400.2 351 63.2
AUR62008395 Chenopodium quinoa HOM05D006541 ORTHO05D008471 3.9e-109 399.1 360 60.3
AUR62021701 Chenopodium quinoa HOM05D006541 ORTHO05D008471 3.9e-109 399.1 360 60.6
MSTRG.11386 Avicennia marina HOM05D006541 ORTHO05D008471 1.1e-108 397.5 356 61.2
Aqoxy3G03367 Aquilegia oxysepala HOM05D006541 ORTHO05D008471 1.5e-108 397.1 354 60.5
HanXRQChr02g0041061 Helianthus annuus HOM05D006541 ORTHO05D008471 1.5e-108 397.1 361 61.2
CANSAT25G3319 Cannabis sativa HOM05D006541 ORTHO05D008471 1.9e-108 396.7 376 59.6
Solyc03g116140.3 Solanum lycopersicum HOM05D006541 ORTHO05D008471 4.3e-108 395.6 386 57.3
CSS0042048 Camellia sinensis var. sinensis HOM05D006541 ORTHO05D008471 3.1e-106 389.4 373 58.7
Actinidia37633 Actinidia chinensis HOM05D006541 ORTHO05D008471 5.3e-106 388.7 289 68.9
CSS0004518 Camellia sinensis var. sinensis HOM05D006541 ORTHO05D008471 5.3e-106 388.7 367 58.6
Lsat_1_v5_gn_1_13281 Lactuca sativa HOM05D006541 ORTHO05D008471 1.2e-105 387.5 357 59.9
CDE06G2127 Ceratophyllum demersum HOM05D006541 ORTHO05D008471 7.6e-105 384.8 378 55.6
BcaB05g23063 Brassica carinata HOM05D006541 ORTHO05D008471 4.9e-104 382.1 359 57.4
PGSC0003DMG400019513 Solanum tuberosum HOM05D006541 ORTHO05D008471 6.4e-104 381.7 372 57.8
ECA247G0129 Erigeron canadensis HOM05D006541 ORTHO05D008471 1.4e-103 380.6 361 57.9
HPP92_016797 Vanilla planifolia HOM05D006541 ORTHO05D008471 5.4e-103 378.6 356 58.7
HPP92_016827 Vanilla planifolia HOM05D006541 ORTHO05D008471 6.0e-102 375.2 356 57.9
Ah.11g048540 Amaranthus hybridus HOM05D006541 ORTHO05D008471 3.9e-101 372.5 360 58.6
EL10Ac5g10987 Beta vulgaris HOM05D006541 ORTHO05D008471 1.3e-99 367.5 357 58.3
Migut.I00173 Erythranthe guttata HOM05D006541 ORTHO05D008471 2.1e-99 366.7 357 58.5
Sc12g0006320 Simmondsia chinensis HOM05D006541 ORTHO05D008471 2.1e-99 366.7 356 59.8
SGA_v2.0_scaffold25G10913 Striga asiatica HOM05D006541 ORTHO05D008471 3.6e-99 365.9 364 58.2
ATR0598G034 Amborella trichopoda HOM05D006541 ORTHO05D008471 3.4e-97 359.4 354 56.8
unitig_0.g2528 Utricularia gibba HOM05D006541 ORTHO05D008471 6.4e-96 355.1 355 57.5
Aa31LG4G16360 Aethionema arabicum HOM05D006541 ORTHO05D008471 6.2e-91 338.6 373 53.1
vmacro17549 Vaccinium macrocarpon HOM05D006541 ORTHO05D008471 3.7e-83 312.8 362 50.3
SEGI_30902 Sequoiadendron giganteum HOM05D006541 ORTHO05D008471 3.4e-81 306.2 362 50.6
Potri.003G168100 Populus trichocarpa HOM05D006541 ORTHO05D008471 1.8e-69 267.3 157 86.6
Zm00001eb312480 Zea mays HOM05D006541 ORTHO05D008471 4.3e-68 262.7 277 53.8
Cpa.g.sc111.3 Carica papaya HOM05D006541 ORTHO05D008471 2.8e-67 260.0 134 99.3
Actinidia04898 Actinidia chinensis HOM05D006541 ORTHO05D008471 6.5e-64 248.8 223 62.3
Mapoly0060s0059 Marchantia polymorpha HOM05D006541 ORTHO05D003603 4.2e-63 246.1 383 41.3
Pp3c16_180 Physcomitrium patens HOM05D006541 ORTHO05D003603 3.7e-59 233.0 363 41.6
Pp3c16_188 Physcomitrium patens HOM05D006541 ORTHO05D003603 3.7e-59 233.0 363 41.6
AagrBONN_evm.TU.Sc2ySwM_228.4960 Anthoceros agrestis HOM05D006541 ORTHO05D008471 1.9e-55 220.7 360 41.7
Os09g0413100 Oryza sativa ssp. japonica HOM05D006541 ORTHO05D008471 1.2e-36 158.3 145 55.9
Actinidia04899 Actinidia chinensis HOM05D006541 ORTHO05D008471 1.5e-36 157.9 122 62.3
CBR_g8828 Chara braunii HOM05D003341 ORTHO05D003603 2.8e-30 137.1 325 34.8
Sed0007979 Sechium edule HOM05D006541 ORTHO05D008471 5.0e-24 116.3 85 69.4
SEGI_16548 Sequoiadendron giganteum HOM05D003341 ORTHO05D003603 3.3e-23 113.6 266 33.8
PRCOL_00002459 Prasinoderma coloniale HOM05D006541 ORTHO05D008471 6.6e-16 89.4 146 39.7
Cre09.g412350 Chlamydomonas reinhardtii HOM05D003341 ORTHO05D003603 1.1e-15 88.6 187 34.2
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 1.9e-10 71.2 92 52.2
vmacro17551 Vaccinium macrocarpon HOM05D006541 ORTHO05D000277 1.0e-08 65.5 61 57.4
FAN14G0637 Fragaria x ananassa HOM05D006541 ORTHO05D008471 1.3e-08 65.1 92 50.0


User provided reference genes

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