Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c35560 Carica papaya HOM05D007407 ORTHO05D009298 3.7e-73 278.1 140 100.0
Ciclev10029563m.g Citrus clementina HOM05D007407 ORTHO05D009298 1.8e-59 232.6 140 82.9
MD10G1101800 Malus domestica HOM05D007407 ORTHO05D009298 2.0e-58 229.2 139 82.7
RcHm_v2.0_Chr6g0254151 Rosa chinensis HOM05D007407 ORTHO05D009298 1.7e-57 226.1 140 82.9
Atru.chr5.2418 Acer truncatum HOM05D007407 ORTHO05D009298 2.9e-57 225.3 140 82.1
CiPaw.05G014900 Carya illinoinensis HOM05D007407 ORTHO05D009298 3.7e-57 224.9 140 82.1
Duzib052G0893 Durio zibethinus HOM05D007407 ORTHO05D009298 4.9e-57 224.6 140 80.0
AUR62008735 Chenopodium quinoa HOM05D007407 ORTHO05D009298 8.3e-57 223.8 140 78.6
TAR628G1347 Trochodendron aralioides HOM05D007407 ORTHO05D009298 1.1e-56 223.4 140 80.0
Aqoxy6G02771 Aquilegia oxysepala HOM05D007407 ORTHO05D009298 1.9e-56 222.6 140 78.6
ClCG10G010580 Citrullus lanatus HOM05D007407 ORTHO05D009298 2.4e-56 222.2 140 79.3
Thecc.02G113100 Theobroma cacao HOM05D007407 ORTHO05D009298 2.4e-56 222.2 140 79.3
Hma1.2p1_1023F.1_g248940 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 5.4e-56 221.1 138 79.7
QL11p032060 Quercus lobata HOM05D007407 ORTHO05D009298 9.2e-56 220.3 139 82.0
CsaV3_4G000500 Cucumis sativus L. HOM05D007407 ORTHO05D009298 1.2e-55 219.9 140 79.3
Gohir.A03G184200 Gossypium hirsutum HOM05D007407 ORTHO05D009298 1.2e-55 219.9 140 79.3
Gohir.D02G205700 Gossypium hirsutum HOM05D007407 ORTHO05D009298 1.2e-55 219.9 140 79.3
Gorai.005G233100 Gossypium raimondii HOM05D007407 ORTHO05D009298 1.2e-55 219.9 140 79.3
GSVIVG01037877001 Vitis vinifera HOM05D007407 ORTHO05D009298 1.2e-55 219.9 140 78.6
Potri.009G091800 Populus trichocarpa HOM05D007407 ORTHO05D009298 2.1e-55 219.2 140 79.3
Actinidia34378 Actinidia chinensis HOM05D007407 ORTHO05D009298 3.5e-55 218.4 139 77.7
Cc02_g19580 Coffea canephora HOM05D007407 ORTHO05D009298 3.5e-55 218.4 140 78.6
Sc18g0003630 Simmondsia chinensis HOM05D007407 ORTHO05D009298 3.5e-55 218.4 140 77.9
Oeu044262.1 Olea europaea HOM05D007407 ORTHO05D009298 4.6e-55 218.0 140 77.9
MSTRG.27752 Avicennia marina HOM05D007407 ORTHO05D009298 7.8e-55 217.2 140 76.4
Nn1g04637 Nelumbo nucifera HOM05D007407 ORTHO05D009298 1.0e-54 216.9 140 77.9
FAN15G3071 Fragaria x ananassa HOM05D007407 ORTHO05D009298 1.3e-54 216.5 140 79.3
FvH4_2g04570 Fragaria vesca HOM05D007407 ORTHO05D009298 1.7e-54 216.1 140 77.9
CAN.G13.9 Capsicum annuum HOM05D007407 ORTHO05D009298 3.9e-54 214.9 140 75.7
FAN27G0322 Fragaria x ananassa HOM05D007407 ORTHO05D009298 3.9e-54 214.9 140 78.6
Sabra09G0070800 Salix brachista HOM05D007407 ORTHO05D009298 5.1e-54 214.5 140 77.1
RhsimUnG0126400 Rhododendron simsii HOM05D007407 ORTHO05D009298 6.6e-54 214.2 139 77.7
Sed0024111 Sechium edule HOM05D007407 ORTHO05D009298 8.6e-54 213.8 140 75.7
Migut.I00274 Erythranthe guttata HOM05D007407 ORTHO05D009298 1.9e-53 212.6 140 75.7
EL10Ac6g13315 Beta vulgaris HOM05D007407 ORTHO05D009298 5.6e-53 211.1 140 75.7
TWI59G1341 Tripterygium wilfordii HOM05D007407 ORTHO05D009298 5.6e-53 211.1 144 75.7
Peaxi162Scf00152g00338 Petunia axillaris HOM05D007407 ORTHO05D009298 2.1e-52 209.1 140 73.6
Dinv42215 Davidia involucrata HOM05D007407 ORTHO05D009298 2.8e-52 208.8 141 77.3
CANSAT25G3533 Cannabis sativa HOM05D007407 ORTHO05D009298 4.7e-52 208.0 140 73.6
SalBow3G4546 Salvia bowleyana HOM05D007407 ORTHO05D009298 4.7e-52 208.0 140 72.9
Psat5g233480 Pisum sativum HOM05D007407 ORTHO05D009298 1.1e-51 206.8 140 75.0
CANSAT25G2132 Cannabis sativa HOM05D007407 ORTHO05D009298 1.4e-51 206.5 140 73.6
Lj3g0017118 Lotus japonicus HOM05D007407 ORTHO05D009298 6.8e-51 204.1 140 72.9
TPR.G5138 Trifolium pratense HOM05D007407 ORTHO05D009298 6.8e-51 204.1 140 72.9
Eucgr.I01082 Eucalyptus grandis HOM05D007407 ORTHO05D009298 1.2e-50 203.4 116 84.5
Rhsim11G0155200 Rhododendron simsii HOM05D007407 ORTHO05D009298 2.6e-50 202.2 121 81.0
SGA_v2.0_scaffold13G06621 Striga asiatica HOM05D007407 ORTHO05D009298 3.4e-50 201.8 176 60.8
Medtr3g010320 Medicago truncatula HOM05D007407 ORTHO05D009298 7.6e-50 200.7 140 71.4
HanXRQChr16g0509111 Helianthus annuus HOM05D007407 ORTHO05D009298 2.2e-49 199.1 137 70.8
Phvul.005G003200 Phaseolus vulgaris HOM05D007407 ORTHO05D009298 2.2e-49 199.1 140 72.9
Sopen11g019840 Solanum pennellii HOM05D007407 ORTHO05D009298 2.2e-49 199.1 140 70.7
Medtr0393s0040 Medicago truncatula HOM05D007407 ORTHO05D009298 6.4e-49 197.6 135 72.6
Nitab4.5_0000088g0130 Nicotiana tabacum HOM05D007407 ORTHO05D009298 2.4e-48 195.7 118 76.3
Aa31sc211G10 Aethionema arabicum HOM05D007407 ORTHO05D009298 4.1e-48 194.9 140 69.3
Manes.07G063400 Manihot esculenta HOM05D007407 ORTHO05D009298 7.1e-48 194.1 188 58.0
Lsat_1_v5_gn_7_86121 Lactuca sativa HOM05D007407 ORTHO05D009298 9.2e-48 193.7 113 80.5
Thhalv10026553m.g Eutrema salsugineum HOM05D007407 ORTHO05D009298 1.2e-47 193.4 140 68.6
Glyma.04G111400 Glycine max HOM05D007407 ORTHO05D009298 2.1e-47 192.6 140 69.3
BraA01t00434Z Brassica rapa HOM05D007407 ORTHO05D009298 6.0e-47 191.0 140 67.9
Sp7g31660 Schrenkiella parvula HOM05D007407 ORTHO05D009298 6.0e-47 191.0 140 67.9
Carub.0007s0650 Capsella rubella HOM05D007407 ORTHO05D009298 7.8e-47 190.7 140 67.9
CARHR242020 Cardamine hirsuta HOM05D007407 ORTHO05D009298 3.9e-46 188.3 140 67.1
Lalb_Chr18g0048491 Lupinus albus HOM05D007407 ORTHO05D009298 8.6e-46 187.2 140 65.7
AL7G17500 Arabidopsis lyrata HOM05D007407 ORTHO05D009298 1.1e-45 186.8 140 67.1
AT4G33925 Arabidopsis thaliana HOM05D007407 ORTHO05D009298 1.9e-45 186.0 140 66.4
Glyma.06G322800 Glycine max HOM05D007407 ORTHO05D009298 2.5e-45 185.7 196 54.1
C01p04860 Brassica napus HOM05D007407 ORTHO05D009298 1.6e-44 183.0 140 66.4
vmacro01981 Vaccinium macrocarpon HOM05D007407 ORTHO05D009298 1.6e-44 183.0 128 74.2
DCAR_001669 Daucus carota HOM05D007407 ORTHO05D009298 2.1e-44 182.6 140 63.6
arahy.Tifrunner.gnm1.ann1.D6X9Y4 Arachis hypogaea HOM05D007407 ORTHO05D009298 6.2e-44 181.0 140 65.7
THA.LOC104807229 Tarenaya hassleriana HOM05D007407 ORTHO05D009298 1.4e-43 179.9 105 81.0
arahy.Tifrunner.gnm1.ann1.2Y2YM1 Arachis hypogaea HOM05D007407 ORTHO05D009298 1.8e-43 179.5 140 65.0
Hund12642 Selenicereus undatus HOM05D007407 ORTHO05D009298 1.8e-43 179.5 100 83.0
Duzib132G0979 Durio zibethinus HOM05D007407 ORTHO05D009298 8.9e-43 177.2 135 66.7
VMungo1080G0753 Vigna mungo HOM05D007407 ORTHO05D009298 8.4e-41 170.6 105 78.1
BolC1t00470H Brassica oleracea HOM05D007407 ORTHO05D009298 4.2e-40 168.3 105 74.3
SHI05205 Sapria himalayana HOM05D007407 ORTHO05D009298 5.4e-40 167.9 96 80.2
MD05G1094600 Malus domestica HOM05D007407 ORTHO05D009298 7.1e-40 167.5 107 78.5
ECA236G1324 Erigeron canadensis HOM05D007407 ORTHO05D009298 2.1e-39 166.0 98 78.6
HPP92_010144 Vanilla planifolia HOM05D007407 ORTHO05D009298 3.9e-38 161.8 143 58.7
Nitab4.5_0000700g0060 Nicotiana tabacum HOM05D007407 ORTHO05D009298 3.3e-37 158.7 105 71.4
SEGI_09286 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 1.6e-36 156.4 117 63.2
PGSC0003DMG400023130 Solanum tuberosum HOM05D007407 ORTHO05D009298 2.8e-36 155.6 92 78.3
Zm00001eb326460 Zea mays HOM05D007407 ORTHO05D009298 6.2e-36 154.5 135 57.8
Solyc11g044330.3 Solanum lycopersicum HOM05D007407 ORTHO05D009298 2.0e-34 149.4 105 70.5
Prupe.8G139500 Prunus persica HOM05D007407 ORTHO05D009298 8.4e-33 144.1 140 62.1
Hma1.2p1_1023F.1_g248930 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 8.7e-30 134.0 140 57.9
Pp3c22_18210 Physcomitrium patens HOM05D007407 ORTHO05D009298 1.3e-28 130.2 126 50.0
Mapoly0083s0061 Marchantia polymorpha HOM05D007407 ORTHO05D009298 3.6e-28 128.6 113 49.6
AagrBONN_evm.TU.Sc2ySwM_228.2221 Anthoceros agrestis HOM05D007407 ORTHO05D009298 1.9e-24 116.3 142 43.7
Manes.07G065401 Manihot esculenta HOM05D007407 ORTHO05D009298 9.3e-24 114.0 70 77.1
CBR_g6331 Chara braunii HOM05D007407 ORTHO05D009298 1.1e-21 107.1 111 49.5
SMO330G0043 Selaginella moellendorffii HOM05D007407 ORTHO05D009298 1.1e-21 107.1 102 50.0
MD00G1205200 Malus domestica HOM05D007407 ORTHO05D009298 2.5e-21 105.9 70 78.6
MCO15G608 Micromonas commoda HOM05D007407 ORTHO05D009298 7.6e-18 94.4 131 39.7
Cre16.g668000 Chlamydomonas reinhardtii HOM05D007407 ORTHO05D009298 4.9e-17 91.7 114 43.0
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 3.5e-15 85.5 74 59.5
Medtr8g072380 Medicago truncatula HOM05D007407 ORTHO05D009298 2.1e-12 76.3 68 58.8
CBR_g37936 Chara braunii HOM05D019869 ORTHO05D028728 1.5e-10 70.1 72 47.2
Medtr2g093710 Medicago truncatula HOM05D007407 ORTHO05D009298 4.5e-10 68.6 89 41.6
unitig_747.g21223 Utricularia gibba HOM05D007407 ORTHO05D009298 8.5e-09 64.3 47 57.4
COL.COLO4_30985 Corchorus olitorius HOM05D001363 ORTHO05D006255 4.2e-08 62.0 46 67.4
unitig_747.g21224 Utricularia gibba HOM05D007407 ORTHO05D009298 2.1e-07 59.7 36 69.4
SEGI_10413 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 5.1e-06 55.1 34 61.8


User provided reference genes

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