Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c34419 Carica papaya HOM05D004645 ORTHO05D005693 5.0e-52 208.4 194 100.0
THA.LOC104802906 Tarenaya hassleriana HOM05D004645 ORTHO05D005693 5.2e-25 118.6 127 50.4
Aa31LG11G12160 Aethionema arabicum HOM05D004645 ORTHO05D005693 4.9e-23 112.1 127 64.6
THA.LOC104820831 Tarenaya hassleriana HOM05D004645 ORTHO05D005693 4.9e-23 112.1 129 55.0
Gorai.003G058500 Gossypium raimondii HOM05D004645 ORTHO05D005693 8.4e-23 111.3 124 81.5
Gohir.D03G055700 Gossypium hirsutum HOM05D004645 ORTHO05D005693 2.4e-22 109.8 124 81.5
Gohir.A02G114700 Gossypium hirsutum HOM05D004645 ORTHO05D005693 5.4e-22 108.6 124 80.6
Thecc.05G223300 Theobroma cacao HOM05D004645 ORTHO05D005693 5.4e-22 108.6 124 81.5
AT5G17510 Arabidopsis thaliana HOM05D004645 ORTHO05D005693 2.7e-21 106.3 126 65.1
A10p21880 Brassica napus HOM05D004645 ORTHO05D005693 4.6e-21 105.5 124 66.1
BraA10t44247Z Brassica rapa HOM05D004645 ORTHO05D005693 4.6e-21 105.5 124 66.1
Carub.0006s1574 Capsella rubella HOM05D004645 ORTHO05D005693 6.0e-21 105.1 127 64.6
Thhalv10013879m.g Eutrema salsugineum HOM05D004645 ORTHO05D005693 6.0e-21 105.1 125 65.6
Duzib128G1942 Durio zibethinus HOM05D004645 ORTHO05D005693 7.8e-21 104.8 124 82.3
BcaB08g36765 Brassica carinata HOM05D004645 ORTHO05D005693 1.0e-20 104.4 124 64.5
CARHR195680 Cardamine hirsuta HOM05D004645 ORTHO05D005693 1.0e-20 104.4 130 63.8
AL3G13140 Arabidopsis lyrata HOM05D004645 ORTHO05D005693 1.7e-20 103.6 124 55.6
BolC9t58802H Brassica oleracea HOM05D004645 ORTHO05D005693 1.7e-20 103.6 125 64.0
BcaC04g18782 Brassica carinata HOM05D004645 ORTHO05D005693 3.0e-20 102.8 125 64.8
Carub.0003s0260 Capsella rubella HOM05D004645 ORTHO05D005693 5.1e-20 102.1 124 66.9
Thhalv10020936m.g Eutrema salsugineum HOM05D004645 ORTHO05D005693 6.6e-20 101.7 133 77.4
C09p59630 Brassica napus HOM05D004645 ORTHO05D005693 8.6e-20 101.3 125 63.2
Duzib177G0889 Durio zibethinus HOM05D004645 ORTHO05D005693 8.6e-20 101.3 131 77.1
Potri.013G076800 Populus trichocarpa HOM05D004645 ORTHO05D005693 2.5e-19 99.8 128 48.4
AL6G28600 Arabidopsis lyrata HOM05D004645 ORTHO05D005693 3.3e-19 99.4 124 59.7
AT3G03460 Arabidopsis thaliana HOM05D004645 ORTHO05D005693 5.6e-19 98.6 124 60.5
Ciclev10031859m.g Citrus clementina HOM05D004645 ORTHO05D005693 5.6e-19 98.6 124 78.2
Sp3g02460 Schrenkiella parvula HOM05D004645 ORTHO05D005693 2.1e-18 96.7 127 61.4
Manes.08G160200 Manihot esculenta HOM05D004645 ORTHO05D005693 3.6e-18 95.9 124 56.5
Atru.chr12.1851 Acer truncatum HOM05D004645 ORTHO05D005693 6.2e-18 95.1 124 78.2
Sp6g26710 Schrenkiella parvula HOM05D004645 ORTHO05D005693 6.2e-18 95.1 133 60.9
FAN10G3994 Fragaria x ananassa HOM05D004645 ORTHO05D005693 8.1e-18 94.7 133 53.4
Lj1g0014871 Lotus japonicus HOM05D004645 ORTHO05D005693 8.1e-18 94.7 124 60.5
Manes.09G130100 Manihot esculenta HOM05D004645 ORTHO05D005693 8.1e-18 94.7 124 60.5
TPR.G9835 Trifolium pratense HOM05D004645 ORTHO05D005693 1.1e-17 94.4 124 75.8
Glyma.12G014000 Glycine max HOM05D004645 ORTHO05D005693 3.1e-17 92.8 132 54.5
MD01G1239600 Malus domestica HOM05D004645 ORTHO05D005693 3.1e-17 92.8 123 61.8
VMungo1127G1262 Vigna mungo HOM05D004645 ORTHO05D005693 3.1e-17 92.8 132 56.1
Psat0s904g0040 Pisum sativum HOM05D004645 ORTHO05D005693 4.0e-17 92.4 136 44.9
CiPaw.05G212200 Carya illinoinensis HOM05D004645 ORTHO05D005693 6.9e-17 91.7 124 58.9
Glyma.09G223000 Glycine max HOM05D004645 ORTHO05D005693 6.9e-17 91.7 134 53.0
CSS0046309 Camellia sinensis var. sinensis HOM05D004645 ORTHO05D005693 1.2e-16 90.9 124 73.4
Medtr0004s0240 Medicago truncatula HOM05D004645 ORTHO05D005693 1.2e-16 90.9 123 67.5
Phvul.011G016900 Phaseolus vulgaris HOM05D004645 ORTHO05D005693 1.2e-16 90.9 123 66.7
RcHm_v2.0_Chr1g0384691 Rosa chinensis HOM05D004645 ORTHO05D005693 1.5e-16 90.5 124 70.2
Psat7g154680 Pisum sativum HOM05D004645 ORTHO05D005693 2.0e-16 90.1 134 44.8
FvH4_7g34300 Fragaria vesca HOM05D004645 ORTHO05D005693 2.6e-16 89.7 124 73.4
FAN01G2860 Fragaria x ananassa HOM05D004645 ORTHO05D005693 2.6e-16 89.7 124 73.4
TWI32G1082 Tripterygium wilfordii HOM05D004645 ORTHO05D005693 3.4e-16 89.4 126 76.2
CDE04G1041 Ceratophyllum demersum HOM05D004645 ORTHO05D005693 4.4e-16 89.0 125 42.4
TWI60G0474 Tripterygium wilfordii HOM05D004645 ORTHO05D005693 4.4e-16 89.0 123 65.9
arahy.Tifrunner.gnm1.ann1.3IB4NC Arachis hypogaea HOM05D004645 ORTHO05D005693 5.8e-16 88.6 130 75.4
arahy.Tifrunner.gnm1.ann1.7F5N7U Arachis hypogaea HOM05D004645 ORTHO05D005693 5.8e-16 88.6 130 75.4
ClCG09G013170 Citrullus lanatus HOM05D004645 ORTHO05D005693 5.8e-16 88.6 126 73.8
MELO3C014340.2 Cucumis melo HOM05D004645 ORTHO05D005693 5.8e-16 88.6 126 74.6
Haze_00364 Corylus avellana HOM05D004645 ORTHO05D005693 1.3e-15 87.4 130 73.1
Lj5g0009502 Lotus japonicus HOM05D004645 ORTHO05D005693 1.3e-15 87.4 123 73.2
Sed0013778 Sechium edule HOM05D004645 ORTHO05D005693 1.7e-15 87.0 126 74.6
BcaC09g47748 Brassica carinata HOM05D004645 ORTHO05D005693 2.9e-15 86.3 125 59.2
CSS0029852 Camellia sinensis var. sinensis HOM05D004645 ORTHO05D005693 3.8e-15 85.9 124 66.1
FAN03G2055 Fragaria x ananassa HOM05D004645 ORTHO05D005693 3.8e-15 85.9 128 75.0
Gohir.A13G158000 Gossypium hirsutum HOM05D004645 ORTHO05D005693 3.8e-15 85.9 124 76.6
PGR119G0624 Punica granatum HOM05D004645 ORTHO05D005693 3.8e-15 85.9 125 68.0
HanXRQChr11g0333681 Helianthus annuus HOM05D004645 ORTHO05D005693 4.9e-15 85.5 123 42.3
Gohir.D13G162500 Gossypium hirsutum HOM05D004645 ORTHO05D005693 8.4e-15 84.7 124 75.8
Gorai.013G184600 Gossypium raimondii HOM05D004645 ORTHO05D005693 1.1e-14 84.3 124 75.8
BNapus_Darmor_BZH_scaffold_162p00170 Brassica napus HOM05D004645 ORTHO05D005693 4.2e-14 82.4 126 58.7
BolC1t05829H Brassica oleracea HOM05D004645 ORTHO05D005693 4.2e-14 82.4 126 58.7
A06p26400 Brassica napus HOM05D004645 ORTHO05D005693 5.4e-14 82.0 37 91.9
BNapus_Darmor_BZH_scaffold_78p00150 Brassica napus HOM05D004645 ORTHO05D005693 5.4e-14 82.0 37 91.9
CANSAT21G0324 Cannabis sativa HOM05D004645 ORTHO05D005693 5.4e-14 82.0 123 73.2
CiPaw.06G036400 Carya illinoinensis HOM05D004645 ORTHO05D005693 7.1e-14 81.6 124 73.4
Dinv01810 Davidia involucrata HOM05D004645 ORTHO05D005693 7.1e-14 81.6 123 72.4
HanXRQChr14g0434641 Helianthus annuus HOM05D004645 ORTHO05D005693 7.1e-14 81.6 126 42.9
MSTRG.26920 Avicennia marina HOM05D004645 ORTHO05D005693 9.3e-14 81.3 125 44.0
Oeu028988.1 Olea europaea HOM05D004645 ORTHO05D005693 9.3e-14 81.3 131 49.6
BraA01t04578Z Brassica rapa HOM05D004645 ORTHO05D005693 1.2e-13 80.9 37 91.9
Lsat_1_v5_gn_8_3080 Lactuca sativa HOM05D004645 ORTHO05D005693 2.1e-13 80.1 123 43.1
Prupe.2G329500 Prunus persica HOM05D004645 ORTHO05D005693 2.7e-13 79.7 124 75.8
Actinidia33801 Actinidia chinensis HOM05D004645 ORTHO05D005693 3.5e-13 79.3 124 69.4
Nitab4.5_0009278g0030 Nicotiana tabacum HOM05D004645 ORTHO05D005693 3.5e-13 79.3 134 38.8
TAR629G2315 Trochodendron aralioides HOM05D004645 ORTHO05D005693 3.5e-13 79.3 123 73.2
EL10Ac3g05041 Beta vulgaris HOM05D004645 ORTHO05D005693 7.8e-13 78.2 200 56.5
Ah.04g156130 Amaranthus hybridus HOM05D004645 ORTHO05D005693 1.0e-12 77.8 124 52.4
AL3G45560 Arabidopsis lyrata HOM05D004645 ORTHO05D005693 1.0e-12 77.8 37 83.8
QL09p020516 Quercus lobata HOM05D004645 ORTHO05D005693 1.3e-12 77.4 37 89.2
SHI15009 Sapria himalayana HOM05D004645 ORTHO05D005693 2.3e-12 76.6 126 41.3
ATR0582G008 Amborella trichopoda HOM05D004645 ORTHO05D005693 3.0e-12 76.3 123 38.2
Lalb_Chr03g0037841 Lupinus albus HOM05D004645 ORTHO05D005693 3.0e-12 76.3 124 46.0
Solyc03g097300.4 Solanum lycopersicum HOM05D004645 ORTHO05D005693 3.0e-12 76.3 133 45.9
Sopen03g028070 Solanum pennellii HOM05D004645 ORTHO05D005693 3.0e-12 76.3 133 45.9
PGSC0003DMG400026490 Solanum tuberosum HOM05D004645 ORTHO05D005693 3.0e-12 76.3 137 45.3
SGA_v2.0_scaffold18G08211 Striga asiatica HOM05D004645 ORTHO05D005693 3.9e-12 75.9 130 47.7
CAN.G732.33 Capsicum annuum HOM05D004645 ORTHO05D005693 5.1e-12 75.5 135 43.7
Migut.L00703 Erythranthe guttata HOM05D004645 ORTHO05D005693 5.1e-12 75.5 123 51.2
GSVIVG01024286001 Vitis vinifera HOM05D004645 ORTHO05D005693 5.1e-12 75.5 37 86.5
ECA238G1292 Erigeron canadensis HOM05D004645 ORTHO05D005693 6.6e-12 75.1 35 88.6
Potri.019G042800 Populus trichocarpa HOM05D004645 ORTHO05D005693 1.1e-11 74.3 154 63.0
Oeu027899.1 Olea europaea HOM05D004645 ORTHO05D005693 1.9e-11 73.6 130 46.2
Cc02_g00050 Coffea canephora HOM05D004645 ORTHO05D005693 2.5e-11 73.2 137 46.7
Lj3C883G6 Lonicera japonica HOM05D000507 ORTHO05D000416 2.5e-11 73.2 33 93.9
Hund09812 Selenicereus undatus HOM05D004645 ORTHO05D005693 2.5e-11 73.2 33 93.9
CsaV3_6G036830 Cucumis sativus L. HOM05D004645 ORTHO05D005693 3.3e-11 72.8 37 83.8
AUR62028214 Chenopodium quinoa HOM05D004645 ORTHO05D005693 5.6e-11 72.0 33 90.9
Aqoxy5G00549 Aquilegia oxysepala HOM05D004645 ORTHO05D005693 7.3e-11 71.6 123 71.5
PSO782G2658 Papaver somniferum HOM05D004645 ORTHO05D005693 9.6e-11 71.2 123 69.9
Peaxi162Scf00516g00425 Petunia axillaris HOM05D004645 ORTHO05D005693 1.3e-10 70.9 123 69.1
Hma1.2p1_0419F.1_g149550 Hydrangea macrophylla HOM05D004645 ORTHO05D005693 2.8e-10 69.7 140 62.1
PSO063G6220 Papaver somniferum HOM05D004645 ORTHO05D005693 2.8e-10 69.7 123 69.1
Dinv17242 Davidia involucrata HOM05D004645 ORTHO05D005693 3.6e-10 69.3 121 57.0
Aa31LG5G13980 Aethionema arabicum HOM05D000507 ORTHO05D000416 1.1e-09 67.8 38 68.4
Nitab4.5_0000021g0850 Nicotiana tabacum HOM05D004645 ORTHO05D005693 1.1e-09 67.8 33 84.8
ECA233G1188 Erigeron canadensis HOM05D004645 ORTHO05D005693 1.5e-08 63.9 26 100.0
HanXRQChr05g0156891 Helianthus annuus HOM05D004645 ORTHO05D005693 3.4e-08 62.8 26 96.2
Sabra19G0053400 Salix brachista HOM05D004645 ORTHO05D005693 3.4e-08 62.8 26 96.2
ECA075G0001 Erigeron canadensis HOM05D004645 ORTHO05D005693 4.5e-08 62.4 35 80.0
DCAR_014580 Daucus carota HOM05D004645 ORTHO05D005693 7.6e-08 61.6 33 72.7
TAR633G2534 Trochodendron aralioides HOM05D004645 ORTHO05D005693 7.6e-08 61.6 26 96.2
Lalb_Chr19g0140101 Lupinus albus HOM05D004645 ORTHO05D005693 9.9e-08 61.2 33 78.8
Oeu057736.1 Olea europaea HOM05D004645 ORTHO05D005693 1.3e-07 60.8 130 36.2
unitig_92.g28227 Utricularia gibba HOM05D004645 ORTHO05D005693 1.4e-06 57.4 23 100.0
AUR62002096 Chenopodium quinoa HOM05D004645 ORTHO05D005693 2.4e-06 56.6 24 91.7
HPP92_006448 Vanilla planifolia HOM05D004645 ORTHO05D005693 9.3e-06 54.7 123 60.2


User provided reference genes

Program Settings