Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c34101 Carica papaya HOM05D002228 ORTHO05D002347 1.1e-41 172.9 91 100.0
Cpa.g.sc95.11 Carica papaya HOM05D002228 ORTHO05D002347 1.1e-41 172.9 91 100.0
Cfa013452 Carpinus fangiana HOM05D002228 ORTHO05D002347 1.2e-19 99.8 89 58.4
Thecc.09G186000 Theobroma cacao HOM05D002228 ORTHO05D002347 1.5e-19 99.4 92 58.7
COL.COLO4_07060 Corchorus olitorius HOM05D002228 ORTHO05D002347 7.6e-19 97.1 91 60.4
Haze_22018 Corylus avellana HOM05D002228 ORTHO05D002347 2.9e-18 95.1 89 56.2
CiPaw.08G032600 Carya illinoinensis HOM05D002228 ORTHO05D002347 3.2e-17 91.7 89 53.9
CiPaw.07G197000 Carya illinoinensis HOM05D002228 ORTHO05D002347 4.2e-17 91.3 87 56.3
Atru.chr7.756 Acer truncatum HOM05D002228 ORTHO05D002347 5.5e-17 90.9 92 56.5
Atru.chr7.777 Acer truncatum HOM05D002228 ORTHO05D002347 5.5e-17 90.9 92 56.5
Gohir.A05G002300 Gossypium hirsutum HOM05D002228 ORTHO05D002347 3.6e-16 88.2 94 56.4
Gohir.D05G002900 Gossypium hirsutum HOM05D002228 ORTHO05D002347 3.6e-16 88.2 94 56.4
Gorai.009G002500 Gossypium raimondii HOM05D002228 ORTHO05D002347 4.6e-16 87.8 94 56.4
QL04p081495 Quercus lobata HOM05D002228 ORTHO05D002347 1.0e-15 86.7 88 53.4
Prupe.1G075500 Prunus persica HOM05D002228 ORTHO05D002347 2.3e-15 85.5 89 56.2
FAN07G2529 Fragaria x ananassa HOM05D002228 ORTHO05D002347 6.7e-15 84.0 90 54.4
Manes.14G158300 Manihot esculenta HOM05D002228 ORTHO05D002347 1.1e-14 83.2 92 52.2
FAN17G2190 Fragaria x ananassa HOM05D002228 ORTHO05D002347 1.5e-14 82.8 91 57.1
Potri.018G142400 Populus trichocarpa HOM05D002228 ORTHO05D002347 1.5e-14 82.8 89 53.9
TWI34G1415 Tripterygium wilfordii HOM05D002228 ORTHO05D002347 1.5e-14 82.8 86 51.2
FvH4_4g07290 Fragaria vesca HOM05D002228 ORTHO05D002347 3.3e-14 81.6 90 53.3
FAN12G0633 Fragaria x ananassa HOM05D002228 ORTHO05D002347 3.3e-14 81.6 90 53.3
FAN22G1886 Fragaria x ananassa HOM05D002228 ORTHO05D002347 3.3e-14 81.6 90 53.3
Sabra18G0116300 Salix brachista HOM05D002228 ORTHO05D002347 9.7e-14 80.1 89 52.8
Ciclev10007587m.g Citrus clementina HOM05D002228 ORTHO05D002347 4.8e-13 77.8 88 51.1
RcHm_v2.0_Chr4g0399601 Rosa chinensis HOM05D002228 ORTHO05D002347 4.8e-13 77.8 90 54.4
Potri.006G075500 Populus trichocarpa HOM05D002228 ORTHO05D002347 1.5e-11 72.8 93 48.4
CsaV3_1G031870 Cucumis sativus L. HOM05D002228 ORTHO05D002347 2.6e-11 72.0 90 50.0
MD16G1248700 Malus domestica HOM05D002228 ORTHO05D002347 3.4e-11 71.6 91 51.6
TPR.G887 Trifolium pratense HOM05D002228 ORTHO05D002347 3.4e-11 71.6 89 44.9
ClCG06G013600 Citrullus lanatus HOM05D002228 ORTHO05D002347 1.7e-10 69.3 90 50.0
MELO3C017429.2 Cucumis melo HOM05D002228 ORTHO05D002347 1.7e-10 69.3 88 48.9
Hma1.2p1_1326F.1_g275820 Hydrangea macrophylla HOM05D002228 ORTHO05D002347 2.2e-10 68.9 87 43.7
Sed0011029 Sechium edule HOM05D002228 ORTHO05D002347 5.0e-10 67.8 86 51.2
Actinidia01276 Actinidia chinensis HOM05D002228 ORTHO05D002347 1.1e-09 66.6 89 43.8
CANSAT11G2326 Cannabis sativa HOM05D002228 ORTHO05D002347 1.1e-09 66.6 90 46.7
Lj6g0002831 Lotus japonicus HOM05D002228 ORTHO05D002347 1.4e-09 66.2 88 45.5
Sabra06G0056400 Salix brachista HOM05D002228 ORTHO05D002347 1.4e-09 66.2 89 47.2
Rhsim01G0117100 Rhododendron simsii HOM05D002228 ORTHO05D002347 3.2e-09 65.1 87 43.7
Lalb_Chr13g0300011 Lupinus albus HOM05D002228 ORTHO05D002347 7.2e-09 63.9 87 43.7
MD13G1241800 Malus domestica HOM05D002228 ORTHO05D002347 1.2e-08 63.2 91 48.4
Peaxi162Scf01038g00149 Petunia axillaris HOM05D002228 ORTHO05D002347 1.2e-08 63.2 88 39.8
Sc07g0008910 Simmondsia chinensis HOM05D002228 ORTHO05D002347 1.2e-08 63.2 89 43.8
Ca_02107_v3 Cicer arietinum L. HOM05D002228 ORTHO05D002347 2.1e-08 62.4 86 41.9
Dinv41174 Davidia involucrata HOM05D002228 ORTHO05D002347 2.1e-08 62.4 86 43.0
Glyma.15G166200 Glycine max HOM05D002228 ORTHO05D002347 2.1e-08 62.4 88 43.2
Lj4g0002272 Lotus japonicus HOM05D002228 ORTHO05D002347 2.1e-08 62.4 87 42.5
Nitab4.5_0010000g0010 Nicotiana tabacum HOM05D002228 ORTHO05D002347 2.1e-08 62.4 87 41.4
vmacro20815 Vaccinium macrocarpon HOM05D002228 ORTHO05D002347 2.7e-08 62.0 88 39.8
Glyma.17G059400 Glycine max HOM05D002228 ORTHO05D002347 3.6e-08 61.6 87 39.1
Nitab4.5_0000617g0060 Nicotiana tabacum HOM05D002228 ORTHO05D002347 7.9e-08 60.5 87 41.4
GSVIVG01010860001 Vitis vinifera HOM05D002228 ORTHO05D002347 7.9e-08 60.5 93 44.1
Eucgr.C00114 Eucalyptus grandis HOM05D002228 ORTHO05D002347 1.0e-07 60.1 92 38.0
Medtr2g038000 Medicago truncatula HOM05D002228 ORTHO05D002347 1.4e-07 59.7 88 38.6
CAN.G491.9 Capsicum annuum HOM05D002228 ORTHO05D002347 1.8e-07 59.3 87 36.8
arahy.Tifrunner.gnm1.ann1.XV9VLA Arachis hypogaea HOM05D002228 ORTHO05D002347 1.1e-06 56.6 88 40.9
CSS0032468 Camellia sinensis var. sinensis HOM05D002228 ORTHO05D002347 1.5e-06 56.2 88 37.5
arahy.Tifrunner.gnm1.ann1.94M007 Arachis hypogaea HOM05D002228 ORTHO05D002347 2.0e-06 55.8 88 40.9
arahy.Tifrunner.gnm1.ann1.FZD5NS Arachis hypogaea HOM05D002228 ORTHO05D002347 2.0e-06 55.8 88 40.9
Migut.J00799 Erythranthe guttata HOM05D002228 ORTHO05D002347 2.0e-06 55.8 91 39.6
VMungo1309G0834 Vigna mungo HOM05D002228 ORTHO05D002347 2.0e-06 55.8 90 38.9
Glyma.13G100500 Glycine max HOM05D002228 ORTHO05D002347 2.6e-06 55.5 87 39.1
Lalb_Chr11g0074731 Lupinus albus HOM05D002228 ORTHO05D002347 2.6e-06 55.5 86 37.2
Cc06_g20930 Coffea canephora HOM05D002228 ORTHO05D002347 3.3e-06 55.1 86 40.7
Glyma.09G059700 Glycine max HOM05D002228 ORTHO05D002347 3.3e-06 55.1 88 40.9
SHI02862 Sapria himalayana HOM05D002228 ORTHO05D002347 5.7e-06 54.3 89 41.6
arahy.Tifrunner.gnm1.ann1.FTH9FU Arachis hypogaea HOM05D002228 ORTHO05D002347 9.7e-06 53.5 86 40.7
arahy.Tifrunner.gnm1.ann1.XG21R6 Arachis hypogaea HOM05D002228 ORTHO05D002347 9.7e-06 53.5 86 40.7
THA.LOC104814652 Tarenaya hassleriana HOM05D002228 ORTHO05D002347 9.7e-06 53.5 85 42.4


User provided reference genes

Program Settings