Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c34081 Carica papaya HOM05D000067 ORTHO05D000097 6.6e-38 160.2 82 100.0
Cpa.g.sc761.1 Carica papaya HOM05D000067 ORTHO05D000097 1.8e-22 109.0 81 71.6
Cpa.g.c34924 Carica papaya HOM05D000067 ORTHO05D000097 1.5e-18 95.9 64 79.7
Cpa.g.c33276.1 Carica papaya HOM05D000067 ORTHO05D000097 3.4e-18 94.7 62 79.0
Cpa.g.sc417.2 Carica papaya HOM05D000067 ORTHO05D000097 1.8e-14 82.4 73 58.9
Cpa.g.sc585.3 Carica papaya HOM05D000067 ORTHO05D000097 3.3e-13 78.2 81 51.9
Sabra16G0281600 Salix brachista HOM05D000067 ORTHO05D000097 1.9e-08 62.4 77 46.8
Duzib106G1220 Durio zibethinus HOM05D000067 ORTHO05D000097 2.5e-08 62.0 57 52.6
Cfa020467 Carpinus fangiana HOM05D000067 ORTHO05D000097 1.6e-07 59.3 73 45.2
FvH4_5g35700 Fragaria vesca HOM05D000067 ORTHO05D000097 2.7e-07 58.5 75 41.3
CSS0021864 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 3.5e-07 58.2 62 53.2
Eucgr.F03400 Eucalyptus grandis HOM05D000067 ORTHO05D000097 3.5e-07 58.2 82 45.1
FAN08G1601 Fragaria x ananassa HOM05D000067 ORTHO05D000097 3.5e-07 58.2 75 41.3
CiPaw.12G125200 Carya illinoinensis HOM05D000067 ORTHO05D000097 4.6e-07 57.8 58 51.7
Duzib170G0344 Durio zibethinus HOM05D000067 ORTHO05D000097 4.6e-07 57.8 76 40.8
Duzib268G0702 Durio zibethinus HOM05D000067 ORTHO05D000097 4.6e-07 57.8 79 40.5
CSS0023999 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 7.9e-07 57.0 62 53.2
Cfa020444 Carpinus fangiana HOM05D000067 ORTHO05D000097 7.9e-07 57.0 73 43.8
CsaV3_3G005760 Cucumis sativus L. HOM05D000067 ORTHO05D000097 7.9e-07 57.0 84 42.9
Eucgr.L02971 Eucalyptus grandis HOM05D000067 ORTHO05D000097 7.9e-07 57.0 82 42.7
CSS0019833 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 1.0e-06 56.6 63 50.8
Glyma.12G138800 Glycine max HOM05D000067 ORTHO05D000097 1.0e-06 56.6 72 47.2
Atru.chr2.3109_Atru.chr2.3098 Acer truncatum HOM05D000067 ORTHO05D000097 1.3e-06 56.2 75 40.0
ClCG10G006250 Citrullus lanatus HOM05D000067 ORTHO05D000097 1.3e-06 56.2 84 40.5
ClCG10G006260 Citrullus lanatus HOM05D000067 ORTHO05D000097 1.3e-06 56.2 84 40.5
Duzib268G1466 Durio zibethinus HOM05D000067 ORTHO05D000097 1.3e-06 56.2 77 37.7
FAN04G1291 Fragaria x ananassa HOM05D000067 ORTHO05D000097 1.3e-06 56.2 68 45.6
CSS0012478 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 1.8e-06 55.8 62 53.2
CSS0031462 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 1.8e-06 55.8 62 51.6
Glyma.12G140600 Glycine max HOM05D000067 ORTHO05D000097 1.8e-06 55.8 72 44.4
QL08p014097 Quercus lobata HOM05D000067 ORTHO05D000097 1.8e-06 55.8 73 43.8
Atru.chr2.3138 Acer truncatum HOM05D000067 ORTHO05D000097 2.3e-06 55.5 75 40.0
CSS0030879 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 2.3e-06 55.5 62 51.6
Dinv20588 Davidia involucrata HOM05D000067 ORTHO05D000097 2.3e-06 55.5 81 42.0
CiPaw.15G083100 Carya illinoinensis HOM05D000067 ORTHO05D000097 3.0e-06 55.1 51 54.9
ClCG00G005770 Citrullus lanatus HOM05D000067 ORTHO05D000097 3.0e-06 55.1 73 37.0
ClCG10G006230 Citrullus lanatus HOM05D000067 ORTHO05D000097 3.0e-06 55.1 73 37.0
Gohir.A11G280700 Gossypium hirsutum HOM05D000067 ORTHO05D000097 3.0e-06 55.1 77 39.0
Gohir.D11G291000 Gossypium hirsutum HOM05D000067 ORTHO05D000097 3.0e-06 55.1 77 39.0
Gohir.D13G147000 Gossypium hirsutum HOM05D000067 ORTHO05D000097 3.0e-06 55.1 77 40.3
Gohir.D13G147100 Gossypium hirsutum HOM05D000067 ORTHO05D000097 3.0e-06 55.1 77 40.3
Gorai.007G314900 Gossypium raimondii HOM05D000067 ORTHO05D000097 3.0e-06 55.1 77 39.0
Gorai.013G164900 Gossypium raimondii HOM05D000067 ORTHO05D000097 3.0e-06 55.1 77 40.3
QL11p016779 Quercus lobata HOM05D000067 ORTHO05D000097 3.0e-06 55.1 73 43.8
QL11p016833 Quercus lobata HOM05D000067 ORTHO05D000097 3.0e-06 55.1 73 43.8
QL11p017339 Quercus lobata HOM05D000067 ORTHO05D000097 3.0e-06 55.1 73 43.8
Atru.chr2.3108 Acer truncatum HOM05D000067 ORTHO05D000097 3.9e-06 54.7 75 38.7
Duzib213G0094 Durio zibethinus HOM05D000067 ORTHO05D000097 3.9e-06 54.7 58 51.7
Duzib213G0864 Durio zibethinus HOM05D000067 ORTHO05D000097 3.9e-06 54.7 77 39.0
Eucgr.K03518 Eucalyptus grandis HOM05D000067 ORTHO05D000097 3.9e-06 54.7 82 40.2
FvH4_7g03620 Fragaria vesca HOM05D000067 ORTHO05D000097 3.9e-06 54.7 71 42.3
FAN01G1075 Fragaria x ananassa HOM05D000067 ORTHO05D000097 3.9e-06 54.7 71 42.3
FAN03G0608 Fragaria x ananassa HOM05D000067 ORTHO05D000097 3.9e-06 54.7 71 42.3
Phvul.011G143200 Phaseolus vulgaris HOM05D000067 ORTHO05D000097 3.9e-06 54.7 63 46.0
Sed0008638 Sechium edule HOM05D000067 ORTHO05D000097 3.9e-06 54.7 73 43.8
EL10Ac6g14646 Beta vulgaris HOM05D000067 ORTHO05D000097 5.1e-06 54.3 76 40.8
FAN10G3934 Fragaria x ananassa HOM05D000067 ORTHO05D000097 5.1e-06 54.3 81 40.7
Thecc.07G056500 Theobroma cacao HOM05D000067 ORTHO05D000097 5.1e-06 54.3 81 44.4
Thecc.07G057300 Theobroma cacao HOM05D000067 ORTHO05D000097 5.1e-06 54.3 77 36.4
CSS0005505 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 6.7e-06 53.9 60 46.7
FAN06G1624 Fragaria x ananassa HOM05D000067 ORTHO05D000097 6.7e-06 53.9 71 42.3
FAN07G0028 Fragaria x ananassa HOM05D000067 ORTHO05D000097 6.7e-06 53.9 79 41.8
QL11p016713 Quercus lobata HOM05D000067 ORTHO05D000097 6.7e-06 53.9 71 45.1
QL11p017235 Quercus lobata HOM05D000067 ORTHO05D000097 6.7e-06 53.9 71 45.1
Cfa020443 Carpinus fangiana HOM05D000067 ORTHO05D000097 8.7e-06 53.5 75 42.7
CiPaw.11G181100 Carya illinoinensis HOM05D000067 ORTHO05D000097 8.7e-06 53.5 73 38.4
CsaV3_3G005780 Cucumis sativus L. HOM05D000067 ORTHO05D000097 8.7e-06 53.5 76 39.5
Dinv03963 Davidia involucrata HOM05D000067 ORTHO05D000097 8.7e-06 53.5 78 39.7
Dinv11141 Davidia involucrata HOM05D000067 ORTHO05D000097 8.7e-06 53.5 78 41.0
FAN02G4166 Fragaria x ananassa HOM05D000067 ORTHO05D000097 8.7e-06 53.5 55 45.5
Gohir.A13G142300 Gossypium hirsutum HOM05D000067 ORTHO05D000097 8.7e-06 53.5 77 39.0
Gohir.A13G142400 Gossypium hirsutum HOM05D000067 ORTHO05D000097 8.7e-06 53.5 77 39.0
Gohir.D11G291300 Gossypium hirsutum HOM05D000067 ORTHO05D000097 8.7e-06 53.5 77 37.7
Gohir.D11G292100 Gossypium hirsutum HOM05D000067 ORTHO05D000097 8.7e-06 53.5 78 38.5
Gohir.D11G292200 Gossypium hirsutum HOM05D000067 ORTHO05D000097 8.7e-06 53.5 78 38.5
Gohir.D11G293700 Gossypium hirsutum HOM05D000067 ORTHO05D000097 8.7e-06 53.5 78 38.5
Gorai.007G315300 Gossypium raimondii HOM05D000067 ORTHO05D000097 8.7e-06 53.5 77 37.7
Gorai.007G316200 Gossypium raimondii HOM05D000067 ORTHO05D000097 8.7e-06 53.5 78 38.5
Gorai.007G316300 Gossypium raimondii HOM05D000067 ORTHO05D000097 8.7e-06 53.5 78 38.5
Gorai.007G316500 Gossypium raimondii HOM05D000067 ORTHO05D000097 8.7e-06 53.5 78 38.5
Gorai.007G316800 Gossypium raimondii HOM05D000067 ORTHO05D000097 8.7e-06 53.5 78 38.5
QL11p016651 Quercus lobata HOM05D000067 ORTHO05D000097 8.7e-06 53.5 71 45.1
Sed0027412 Sechium edule HOM05D000067 ORTHO05D000097 8.7e-06 53.5 73 42.5
VMungo1127G0796 Vigna mungo HOM05D000067 ORTHO05D000097 8.7e-06 53.5 74 43.2


User provided reference genes

Program Settings