Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c33751 Carica papaya HOM05D001139 ORTHO05D028560 3.2e-21 104.0 46 100.0
CANSAT11G2613 Cannabis sativa HOM05D001139 ORTHO05D000936 4.4e-15 83.6 46 78.3
Dinv22312 Davidia involucrata HOM05D001139 ORTHO05D000936 5.8e-15 83.2 46 78.3
vmacro11770 Vaccinium macrocarpon HOM05D001139 ORTHO05D000936 9.9e-15 82.4 45 75.6
CiPaw.11G183100 Carya illinoinensis HOM05D001139 ORTHO05D000936 1.3e-14 82.0 46 78.3
Cfa020434 Carpinus fangiana HOM05D001139 ORTHO05D000936 2.2e-14 81.3 47 78.7
Haze_09594 Corylus avellana HOM05D001139 ORTHO05D000936 2.2e-14 81.3 47 78.7
Hma1.2p1_1054F.1_g252450 Hydrangea macrophylla HOM05D001139 ORTHO05D000936 3.7e-14 80.5 46 73.9
CSS0025308 Camellia sinensis var. sinensis HOM05D001139 ORTHO05D000936 4.9e-14 80.1 46 73.9
CSS0028637 Camellia sinensis var. sinensis HOM05D001139 ORTHO05D000936 4.9e-14 80.1 46 73.9
Manes.15G077000 Manihot esculenta HOM05D001139 ORTHO05D000936 4.9e-14 80.1 46 78.3
CiPaw.12G126000 Carya illinoinensis HOM05D001139 ORTHO05D000936 8.3e-14 79.3 45 73.3
QL08p013457 Quercus lobata HOM05D001139 ORTHO05D000936 8.3e-14 79.3 47 74.5
QL08p013775 Quercus lobata HOM05D001139 ORTHO05D000936 8.3e-14 79.3 47 74.5
Prupe.4G201500 Prunus persica HOM05D001139 ORTHO05D000936 2.4e-13 77.8 46 73.9
CsaV3_3G022870 Cucumis sativus L. HOM05D001139 ORTHO05D000936 4.1e-13 77.0 43 74.4
Ciclev10009354m.g Citrus clementina HOM05D001139 ORTHO05D000936 7.1e-13 76.3 46 78.3
CsaV3_3G022930 Cucumis sativus L. HOM05D001139 ORTHO05D000936 9.2e-13 75.9 43 72.1
Hma1.2p1_2644F.1_g325940 Hydrangea macrophylla HOM05D001139 ORTHO05D000936 9.2e-13 75.9 47 72.3
ClCG10G005740 Citrullus lanatus HOM05D001139 ORTHO05D000936 2.1e-12 74.7 46 67.4
Manes.03G122100 Manihot esculenta HOM05D001139 ORTHO05D000936 2.1e-12 74.7 46 73.9
Phvul.011G141300 Phaseolus vulgaris HOM05D001139 ORTHO05D000936 2.1e-12 74.7 46 69.6
Hma1.2p1_2810F.1_g328880 Hydrangea macrophylla HOM05D001139 ORTHO05D000936 3.5e-12 73.9 47 70.2
RhsimUnG0253400 Rhododendron simsii HOM05D001139 ORTHO05D000936 3.5e-12 73.9 46 69.6
VMungo1127G1348 Vigna mungo HOM05D001139 ORTHO05D000936 3.5e-12 73.9 46 69.6
Migut.M01814 Erythranthe guttata HOM05D001139 ORTHO05D000936 4.6e-12 73.6 46 71.7
vmacro09749 Vaccinium macrocarpon HOM05D001139 ORTHO05D000936 6.0e-12 73.2 46 67.4
MSTRG.14412 Avicennia marina HOM05D001139 ORTHO05D000936 7.8e-12 72.8 45 73.3
Cc05_g13180 Coffea canephora HOM05D001139 ORTHO05D000936 1.0e-11 72.4 46 71.7
Oeu062621.1 Olea europaea HOM05D001139 ORTHO05D000936 1.0e-11 72.4 44 70.5
PGR083G1547 Punica granatum HOM05D001139 ORTHO05D000936 1.0e-11 72.4 45 73.3
MSTRG.6888 Avicennia marina HOM05D001139 ORTHO05D000936 1.3e-11 72.0 46 71.7
Lj3g0008754 Lotus japonicus HOM05D001139 ORTHO05D000936 1.3e-11 72.0 47 70.2
ClCG05G014800 Citrullus lanatus HOM05D001139 ORTHO05D000936 1.7e-11 71.6 42 71.4
MELO3C018123.2 Cucumis melo HOM05D001139 ORTHO05D000936 1.7e-11 71.6 43 67.4
Lsat_1_v5_gn_7_108280 Lactuca sativa HOM05D001139 ORTHO05D000936 1.7e-11 71.6 46 67.4
SalBow7G1848 Salvia bowleyana HOM05D001139 ORTHO05D000936 2.3e-11 71.2 45 71.1
arahy.Tifrunner.gnm1.ann1.ZSV3DU Arachis hypogaea HOM05D001139 ORTHO05D000936 3.0e-11 70.9 46 65.2
Glyma.06G266800 Glycine max HOM05D001139 ORTHO05D000936 3.0e-11 70.9 46 67.4
PGR031G3255 Punica granatum HOM05D001139 ORTHO05D000936 5.1e-11 70.1 44 70.5
arahy.Tifrunner.gnm1.ann1.YHH73E Arachis hypogaea HOM05D001139 ORTHO05D000936 6.6e-11 69.7 46 63.0
MELO3C018125.2 Cucumis melo HOM05D001139 ORTHO05D000936 6.6e-11 69.7 43 67.4
Sed0024068 Sechium edule HOM05D001139 ORTHO05D000936 6.6e-11 69.7 46 63.0
GSVIVG01014589001 Vitis vinifera HOM05D001139 ORTHO05D000936 6.6e-11 69.7 47 68.1
TPR.G25926 Trifolium pratense HOM05D001139 ORTHO05D000936 8.6e-11 69.3 46 65.2
Nn1g03709 Nelumbo nucifera HOM05D001139 ORTHO05D000936 1.5e-10 68.6 46 60.9
Nn1g06963 Nelumbo nucifera HOM05D001139 ORTHO05D000936 1.5e-10 68.6 46 63.0
SGA_v2.0_scaffold416G51222 Striga asiatica HOM05D001139 ORTHO05D000936 1.5e-10 68.6 45 68.9
Ca_18844_v3 Cicer arietinum L. HOM05D005332 ORTHO05D006861 2.5e-10 67.8 47 68.1
Eucgr.F03420 Eucalyptus grandis HOM05D001139 ORTHO05D000936 2.5e-10 67.8 45 68.9
Lsat_1_v5_gn_5_5640 Lactuca sativa HOM05D001139 ORTHO05D000936 3.3e-10 67.4 47 66.0
TAR629G1325 Trochodendron aralioides HOM05D001139 ORTHO05D000936 3.3e-10 67.4 46 63.0
Glyma.12G136300 Glycine max HOM05D001139 ORTHO05D000936 4.3e-10 67.0 46 63.0
Glyma.12G214900 Glycine max HOM05D001139 ORTHO05D000936 5.6e-10 66.6 47 68.1
PGSC0003DMG400019263 Solanum tuberosum HOM05D001139 ORTHO05D000936 5.6e-10 66.6 46 67.4
Actinidia09958 Actinidia chinensis HOM05D001139 ORTHO05D000936 7.3e-10 66.2 45 60.0
Lsat_1_v5_gn_7_108260 Lactuca sativa HOM05D001139 ORTHO05D000936 7.3e-10 66.2 46 65.2
Medtr4g081370 Medicago truncatula HOM05D001139 ORTHO05D000936 7.3e-10 66.2 47 63.8
Actinidia05126 Actinidia chinensis HOM05D001139 ORTHO05D000936 9.5e-10 65.9 46 54.3
Sed0008257 Sechium edule HOM05D001139 ORTHO05D000936 1.2e-09 65.5 46 60.9
VMungo1080G0913 Vigna mungo HOM05D001139 ORTHO05D000936 2.1e-09 64.7 47 66.0
Glyma.13G286700 Glycine max HOM05D001139 ORTHO05D000936 2.8e-09 64.3 48 64.6
Nitab4.5_0000397g0120 Nicotiana tabacum HOM05D001139 ORTHO05D000936 3.6e-09 63.9 46 63.0
Nitab4.5_0002238g0060 Nicotiana tabacum HOM05D001139 ORTHO05D000936 3.6e-09 63.9 46 63.0
FvH4_3g21720 Fragaria vesca HOM05D001139 ORTHO05D000936 4.7e-09 63.5 46 65.2
FAN11G2186 Fragaria x ananassa HOM05D001139 ORTHO05D000936 4.7e-09 63.5 46 65.2
FAN21G0033 Fragaria x ananassa HOM05D001139 ORTHO05D000936 4.7e-09 63.5 46 65.2
FAN25G1929 Fragaria x ananassa HOM05D001139 ORTHO05D000936 4.7e-09 63.5 46 65.2
FAN16G3065 Fragaria x ananassa HOM05D001139 ORTHO05D000936 6.2e-09 63.2 46 65.2
Migut.H01862 Erythranthe guttata HOM05D001139 ORTHO05D000936 8.1e-09 62.8 46 65.2
MSTRG.12953 Avicennia marina HOM05D001139 ORTHO05D000936 1.1e-08 62.4 45 64.4
MD03G1212600 Malus domestica HOM05D001139 ORTHO05D000936 1.4e-08 62.0 46 63.0
CAN.G337.154 Capsicum annuum HOM05D001139 ORTHO05D000936 1.8e-08 61.6 47 63.8
TAR627G0771 Trochodendron aralioides HOM05D001139 ORTHO05D000936 1.8e-08 61.6 41 65.9
Actinidia10704 Actinidia chinensis HOM05D001139 ORTHO05D000936 2.4e-08 61.2 45 64.4
TWI38G1383 Tripterygium wilfordii HOM05D001139 ORTHO05D000936 2.4e-08 61.2 45 64.4
Aqoxy4G02124 Aquilegia oxysepala HOM05D001139 ORTHO05D000936 3.1e-08 60.8 46 58.7
DCAR_010015 Daucus carota HOM05D001139 ORTHO05D000936 3.1e-08 60.8 47 63.8
Lj8C165T10 Lonicera japonica HOM05D001139 ORTHO05D000936 3.1e-08 60.8 47 59.6
Phvul.005G091000 Phaseolus vulgaris HOM05D001139 ORTHO05D000936 3.1e-08 60.8 47 66.0
Solyc07g064040.3 Solanum lycopersicum HOM05D001139 ORTHO05D000936 3.1e-08 60.8 46 63.0
Sopen07g032180 Solanum pennellii HOM05D001139 ORTHO05D000936 3.1e-08 60.8 46 63.0
MD11G1227800 Malus domestica HOM05D001139 ORTHO05D000936 5.2e-08 60.1 45 62.2
Ca_01758_v3 Cicer arietinum L. HOM05D001139 ORTHO05D000936 6.8e-08 59.7 36 72.2
Ca_01764_v3 Cicer arietinum L. HOM05D001139 ORTHO05D000936 6.8e-08 59.7 36 72.2
MBI02_g29698_MAGBIO Magnolia biondii HOM05D001139 ORTHO05D000936 6.8e-08 59.7 45 60.0
HanXRQChr11g0333051 Helianthus annuus HOM05D001139 ORTHO05D000936 8.9e-08 59.3 48 64.6
Lj3g0008180 Lotus japonicus HOM05D001139 ORTHO05D000936 1.2e-07 58.9 47 59.6
Psat5g249760 Pisum sativum HOM05D001139 ORTHO05D000936 1.5e-07 58.5 42 66.7
TWI39G0997 Tripterygium wilfordii HOM05D001139 ORTHO05D000936 1.5e-07 58.5 45 60.0
HanXRQChr08g0233941 Helianthus annuus HOM05D001139 ORTHO05D000936 2.0e-07 58.2 46 58.7
Nitab4.5_0002342g0110 Nicotiana tabacum HOM05D001139 ORTHO05D000936 2.0e-07 58.2 46 58.7
TWI38G1309 Tripterygium wilfordii HOM05D001139 ORTHO05D000936 2.6e-07 57.8 45 62.2
Gohir.D11G290900 Gossypium hirsutum HOM05D001139 ORTHO05D000936 3.4e-07 57.4 49 63.3
Gorai.007G314800 Gossypium raimondii HOM05D001139 ORTHO05D000936 3.4e-07 57.4 49 63.3
RcHm_v2.0_Chr5g0037201 Rosa chinensis HOM05D001139 ORTHO05D000936 3.4e-07 57.4 47 61.7
TAR624G1103 Trochodendron aralioides HOM05D001139 ORTHO05D000936 3.4e-07 57.4 46 58.7
Gohir.A11G280600 Gossypium hirsutum HOM05D001139 ORTHO05D000936 4.4e-07 57.0 49 61.2
Psat7g122200 Pisum sativum HOM05D001139 ORTHO05D000936 5.8e-07 56.6 48 60.4
Gohir.D11G291201 Gossypium hirsutum HOM05D046222 ORTHO05D028560 1.3e-06 55.5 49 61.2
Gorai.007G315200 Gossypium raimondii HOM05D046222 ORTHO05D028560 1.3e-06 55.5 49 61.2
Actinidia35313 Actinidia chinensis HOM05D001139 ORTHO05D000936 1.7e-06 55.1 44 61.4
CANSAT64G1330 Cannabis sativa HOM05D001139 ORTHO05D000936 1.7e-06 55.1 47 53.2
CiPaw.03G163600 Carya illinoinensis HOM05D001139 ORTHO05D000936 1.7e-06 55.1 44 59.1
Duzib213G0055 Durio zibethinus HOM05D001139 ORTHO05D000936 1.7e-06 55.1 49 61.2
Thhalv10011752m.g Eutrema salsugineum HOM05D001139 ORTHO05D000936 1.7e-06 55.1 46 56.5
Solyc10g006510.3 Solanum lycopersicum HOM05D001139 ORTHO05D000936 1.7e-06 55.1 45 62.2
Sopen10g002460 Solanum pennellii HOM05D001139 ORTHO05D000936 1.7e-06 55.1 45 62.2
Medtr2g082640 Medicago truncatula HOM05D001139 ORTHO05D000936 2.2e-06 54.7 37 70.3
SHI31875 Sapria himalayana HOM05D001139 ORTHO05D028560 2.2e-06 54.7 46 60.9
Hund02140 Selenicereus undatus HOM05D001139 ORTHO05D000936 2.2e-06 54.7 46 54.3
PGSC0003DMG400014432 Solanum tuberosum HOM05D001139 ORTHO05D000936 2.9e-06 54.3 45 62.2
Atru.chr2.3184 Acer truncatum HOM05D001139 ORTHO05D000936 4.9e-06 53.5 43 55.8
Atru.chr2.3194 Acer truncatum HOM05D001139 ORTHO05D000936 4.9e-06 53.5 43 55.8
unitig_749.g13974 Utricularia gibba HOM05D000221 ORTHO05D000936 4.9e-06 53.5 46 52.2
Aa31LG10G3390 Aethionema arabicum HOM05D001139 ORTHO05D000936 6.4e-06 53.1 46 54.3
Nitab4.5_0002229g0100 Nicotiana tabacum HOM05D001139 ORTHO05D000936 6.4e-06 53.1 44 54.5
Duzib170G0527 Durio zibethinus HOM05D001139 ORTHO05D000936 8.4e-06 52.8 51 58.8
Lalb_Chr01g0006121 Lupinus albus HOM05D001139 ORTHO05D000936 8.4e-06 52.8 46 56.5


User provided reference genes

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