Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c33129.1 Carica papaya HOM05D005890 ORTHO05D006717 3.0e-91 338.6 178 100.0
Prupe.1G073000 Prunus persica HOM05D005890 ORTHO05D006717 2.6e-15 86.3 101 52.5
THA.LOC104817770 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 3.8e-14 82.4 104 49.0
Thhalv10013871m.g Eutrema salsugineum HOM05D005890 ORTHO05D006717 1.1e-13 80.9 102 52.9
Eucgr.C02214 Eucalyptus grandis HOM05D005890 ORTHO05D006717 1.4e-13 80.5 122 47.5
Cfa013466 Carpinus fangiana HOM05D005890 ORTHO05D006717 1.9e-13 80.1 112 49.1
MD13G1240600 Malus domestica HOM05D005890 ORTHO05D006717 3.2e-13 79.3 116 45.7
CiPaw.08G031700 Carya illinoinensis HOM05D005890 ORTHO05D006717 4.2e-13 79.0 153 37.3
FAN17G2561 Fragaria x ananassa HOM05D005890 ORTHO05D006717 4.2e-13 79.0 138 40.6
FvH4_4g06950 Fragaria vesca HOM05D005890 ORTHO05D006717 9.4e-13 77.8 138 40.6
FAN07G1770 Fragaria x ananassa HOM05D005890 ORTHO05D006717 9.4e-13 77.8 138 39.9
FAN12G2329 Fragaria x ananassa HOM05D005890 ORTHO05D006717 9.4e-13 77.8 138 40.6
CARHR270890 Cardamine hirsuta HOM05D005890 ORTHO05D006717 2.1e-12 76.6 120 43.3
PGR044G2166 Punica granatum HOM05D005890 ORTHO05D006717 3.6e-12 75.9 99 46.5
BcaC03g14182 Brassica carinata HOM05D005890 ORTHO05D006717 4.7e-12 75.5 96 52.1
C02p14590 Brassica napus HOM05D005890 ORTHO05D006717 4.7e-12 75.5 96 52.1
BolC2t07586H Brassica oleracea HOM05D005890 ORTHO05D006717 4.7e-12 75.5 96 52.1
Dinv41195 Davidia involucrata HOM05D005890 ORTHO05D006717 4.7e-12 75.5 105 47.6
A02p08710 Brassica napus HOM05D005890 ORTHO05D006717 8.0e-12 74.7 96 51.0
Lalb_Chr13g0299851 Lupinus albus HOM05D005890 ORTHO05D006717 8.0e-12 74.7 106 49.1
MD16G1246300 Malus domestica HOM05D005890 ORTHO05D006717 8.0e-12 74.7 143 39.2
Manes.06G017800 Manihot esculenta HOM05D005890 ORTHO05D006717 8.0e-12 74.7 91 49.5
Sp6g18850 Schrenkiella parvula HOM05D005890 ORTHO05D006717 8.0e-12 74.7 101 47.5
TWI32G1283 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 1.4e-11 73.9 84 56.0
Thecc.09G191500 Theobroma cacao HOM05D005890 ORTHO05D006717 3.9e-11 72.4 100 48.0
CANSAT01G0113 Cannabis sativa HOM05D005890 ORTHO05D006717 5.2e-11 72.0 122 43.4
RcHm_v2.0_Chr4g0398981 Rosa chinensis HOM05D005890 ORTHO05D006717 5.2e-11 72.0 144 41.0
Aa31LG3G13020 Aethionema arabicum HOM05D005890 ORTHO05D006717 6.7e-11 71.6 142 40.1
BcaB05g22318 Brassica carinata HOM05D005890 ORTHO05D006717 8.8e-11 71.2 149 38.9
BraA02t05941Z Brassica rapa HOM05D005890 ORTHO05D006717 8.8e-11 71.2 97 50.5
Hma1.2p1_0235F.1_g098760 Hydrangea macrophylla HOM05D005890 ORTHO05D006717 1.1e-10 70.9 131 39.7
Potri.006G073100 Populus trichocarpa HOM05D005890 ORTHO05D006717 1.1e-10 70.9 118 42.4
QL07p048247 Quercus lobata HOM05D005890 ORTHO05D006717 4.4e-10 68.9 106 45.3
COL.COLO4_08570 Corchorus olitorius HOM05D005890 ORTHO05D006717 1.3e-09 67.4 86 52.3
Glyma.13G101600 Glycine max HOM05D005890 ORTHO05D006717 2.2e-09 66.6 99 48.5
TWI34G1560 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 2.2e-09 66.6 72 55.6
Ca_21262_v3 Cicer arietinum L. HOM05D005890 ORTHO05D006717 2.8e-09 66.2 85 54.1
Sed0014693 Sechium edule HOM05D005890 ORTHO05D006717 2.8e-09 66.2 138 41.3
MBI18_g10586_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 3.7e-09 65.9 89 42.7
Nn8g40670 Nelumbo nucifera HOM05D005890 ORTHO05D006717 4.8e-09 65.5 109 42.2
TPR.G5393 Trifolium pratense HOM05D005890 ORTHO05D006717 4.8e-09 65.5 100 48.0
Rhsim01G0114500 Rhododendron simsii HOM05D005890 ORTHO05D006717 8.2e-09 64.7 89 48.3
GSVIVG01029286001 Vitis vinifera HOM05D005890 ORTHO05D006717 8.2e-09 64.7 112 40.2
arahy.Tifrunner.gnm1.ann1.CB00ZF Arachis hypogaea HOM05D005890 ORTHO05D006717 1.1e-08 64.3 116 39.7
VMungo1215G0729 Vigna mungo HOM05D005890 ORTHO05D006717 1.1e-08 64.3 94 44.7
arahy.Tifrunner.gnm1.ann1.V3N0NP Arachis hypogaea HOM05D005890 ORTHO05D006717 1.4e-08 63.9 93 46.2
Duzib170G1164 Durio zibethinus HOM05D005890 ORTHO05D006717 1.4e-08 63.9 122 41.8
Phvul.003G140452 Phaseolus vulgaris HOM05D005890 ORTHO05D006717 1.4e-08 63.9 94 45.7
CiPaw.07G198700 Carya illinoinensis HOM05D005890 ORTHO05D006717 1.8e-08 63.5 93 43.0
Medtr4g127160 Medicago truncatula HOM05D005890 ORTHO05D006717 2.4e-08 63.2 93 49.5
Gohir.A05G408300 Gossypium hirsutum HOM05D005890 ORTHO05D006717 4.1e-08 62.4 86 46.5
Lj4g0027857 Lotus japonicus HOM05D005890 ORTHO05D006717 4.1e-08 62.4 101 44.6
Cc03_g15250 Coffea canephora HOM05D005890 ORTHO05D006717 7.0e-08 61.6 96 39.6
Carub.0008s1762 Capsella rubella HOM05D005890 ORTHO05D006717 2.0e-07 60.1 69 55.1
ClCG06G013720 Citrullus lanatus HOM05D005890 ORTHO05D006717 2.0e-07 60.1 130 38.5
Peaxi162Scf00046g00417 Petunia axillaris HOM05D005890 ORTHO05D006717 2.0e-07 60.1 96 41.7
Gohir.D04G007200 Gossypium hirsutum HOM05D005890 ORTHO05D006717 3.5e-07 59.3 86 45.3
Gorai.012G008900 Gossypium raimondii HOM05D005890 ORTHO05D006717 3.5e-07 59.3 86 45.3
Potri.018G140200 Populus trichocarpa HOM05D005890 ORTHO05D006717 4.5e-07 58.9 72 52.8
CsaV3_3G012070 Cucumis sativus L. HOM05D005890 ORTHO05D006717 5.9e-07 58.5 123 38.2
Sabra06G0054500 Salix brachista HOM05D005890 ORTHO05D006717 7.7e-07 58.2 82 46.3
THA.LOC104813501 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 7.7e-07 58.2 57 59.6
DCAR_018014 Daucus carota HOM05D005890 ORTHO05D006717 1.3e-06 57.4 78 44.9
Dinv25461 Davidia involucrata HOM05D005890 ORTHO05D006717 1.3e-06 57.4 98 39.8
MELO3C006422.2 Cucumis melo HOM05D005890 ORTHO05D006717 3.8e-06 55.8 124 37.1
Lsat_1_v5_gn_7_55781 Lactuca sativa HOM05D005890 ORTHO05D006717 3.8e-06 55.8 88 40.9
AT5G57120 Arabidopsis thaliana HOM05D005890 ORTHO05D006717 5.0e-06 55.5 53 62.3
HanXRQChr03g0065401 Helianthus annuus HOM05D005890 ORTHO05D006717 6.5e-06 55.1 99 36.4
HanXRQChr10g0308981 Helianthus annuus HOM05D005890 ORTHO05D006717 8.5e-06 54.7 80 45.0
Hund24378 Selenicereus undatus HOM05D005890 ORTHO05D006717 8.5e-06 54.7 91 37.4


User provided reference genes

Program Settings