Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c33072 Carica papaya HOM05D000126 ORTHO05D120208 8.7e-21 102.8 57 100.0
Carub.0005s1732 Capsella rubella HOM05D000126 ORTHO05D000085 2.0e-09 65.1 52 71.2
Aa31LG4G19040 Aethionema arabicum HOM05D000126 ORTHO05D000085 2.6e-09 64.7 49 69.4
Aa31LG4G19070 Aethionema arabicum HOM05D000126 ORTHO05D000085 2.6e-09 64.7 47 72.3
AL113U10020 Arabidopsis lyrata HOM05D000126 ORTHO05D000085 4.5e-09 63.9 57 68.4
Duzib264G0526 Durio zibethinus HOM05D000126 ORTHO05D000085 7.7e-09 63.2 52 67.3
AT3G50930 Arabidopsis thaliana HOM05D000126 ORTHO05D000085 1.3e-08 62.4 57 68.4
Thhalv10023809m.g Eutrema salsugineum HOM05D000126 ORTHO05D000085 1.3e-08 62.4 54 66.7
COL.COLO4_22026 Corchorus olitorius HOM05D000126 ORTHO05D000085 1.7e-08 62.0 45 71.1
Thhalv10010287m.g Eutrema salsugineum HOM05D000126 ORTHO05D000085 2.9e-08 61.2 54 64.8
Thecc.01G029700 Theobroma cacao HOM05D000126 ORTHO05D000085 2.9e-08 61.2 53 66.0
C08p26200 Brassica napus HOM05D000126 ORTHO05D000085 5.0e-08 60.5 47 70.2
COL.COLO4_22025 Corchorus olitorius HOM05D000126 ORTHO05D000085 5.0e-08 60.5 53 60.4
C07p46080 Brassica napus HOM05D000126 ORTHO05D000085 6.5e-08 60.1 52 63.5
BolC7t45124H Brassica oleracea HOM05D000126 ORTHO05D000085 6.5e-08 60.1 52 63.5
A09p44060 Brassica napus HOM05D000126 ORTHO05D000085 1.1e-07 59.3 45 71.1
BraA09t39864Z Brassica rapa HOM05D000126 ORTHO05D000085 1.1e-07 59.3 45 71.1
CARHR153680 Cardamine hirsuta HOM05D000126 ORTHO05D000085 1.1e-07 59.3 47 68.1
BcaB01g00562 Brassica carinata HOM05D000126 ORTHO05D000085 1.4e-07 58.9 48 64.6
BcaC07g39564 Brassica carinata HOM05D000126 ORTHO05D000085 1.4e-07 58.9 45 71.1
BolC8t50238H Brassica oleracea HOM05D000126 ORTHO05D000085 1.4e-07 58.9 45 71.1
Carub.0005s1733 Capsella rubella HOM05D000126 ORTHO05D000085 1.4e-07 58.9 45 71.1
A03p48060 Brassica napus HOM05D000126 ORTHO05D000085 2.5e-07 58.2 55 61.8
BraA03t13913Z Brassica rapa HOM05D000126 ORTHO05D000085 2.5e-07 58.2 55 61.8
Sp5g11280 Schrenkiella parvula HOM05D000126 ORTHO05D000085 3.2e-07 57.8 56 64.3
CARHR184140 Cardamine hirsuta HOM05D000126 ORTHO05D000085 5.5e-07 57.0 56 62.5
QL06p035371 Quercus lobata HOM05D000126 ORTHO05D000085 7.2e-07 56.6 48 66.7
BcaNung00406 Brassica carinata HOM05D000126 ORTHO05D000085 1.2e-06 55.8 47 61.7
BraA01t02283Z Brassica rapa HOM05D000126 ORTHO05D000085 1.2e-06 55.8 57 57.9
CiPaw.08G139500 Carya illinoinensis HOM05D000126 ORTHO05D000085 1.2e-06 55.8 56 57.1
A01p23730 Brassica napus HOM05D000126 ORTHO05D000085 1.6e-06 55.5 57 57.9
Sp5g11270 Schrenkiella parvula HOM05D000126 ORTHO05D000085 1.6e-06 55.5 45 66.7
BcaC09g50059 Brassica carinata HOM05D000126 ORTHO05D000085 2.7e-06 54.7 57 57.9
C01p29490 Brassica napus HOM05D000126 ORTHO05D000085 2.7e-06 54.7 57 57.9
BolC1t02890H Brassica oleracea HOM05D000126 ORTHO05D000085 2.7e-06 54.7 57 57.9
Ah.03g141160 Amaranthus hybridus HOM05D000126 ORTHO05D000085 3.6e-06 54.3 42 71.4
BcaB01g00560 Brassica carinata HOM05D000126 ORTHO05D000085 4.7e-06 53.9 43 67.4
Carub.0005s1734 Capsella rubella HOM05D000126 ORTHO05D000085 4.7e-06 53.9 49 63.3
Thhalv10010367m.g Eutrema salsugineum HOM05D000126 ORTHO05D000085 4.7e-06 53.9 43 69.8
Manes.01G138900 Manihot esculenta HOM05D000126 ORTHO05D000085 6.1e-06 53.5 52 59.6
Sed0026054 Sechium edule HOM05D000126 ORTHO05D000085 6.1e-06 53.5 53 56.6
TAR628G1689 Trochodendron aralioides HOM05D000126 ORTHO05D000085 6.1e-06 53.5 48 64.6
TAR629G2805 Trochodendron aralioides HOM05D000126 ORTHO05D000085 6.1e-06 53.5 49 63.3


User provided reference genes

Program Settings