Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c32694.2 Carica papaya HOM05D002631 ORTHO05D002861 1.4e-94 349.7 196 100.0
Cfa007243 Carpinus fangiana HOM05D002631 ORTHO05D002861 1.0e-36 157.5 188 51.6
COL.COLO4_17171 Corchorus olitorius HOM05D002631 ORTHO05D002861 1.3e-36 157.1 212 47.2
Duzib147G0551 Durio zibethinus HOM05D002631 ORTHO05D002861 2.3e-36 156.4 187 52.4
CiPaw.03G053800 Carya illinoinensis HOM05D002631 ORTHO05D002861 1.6e-34 150.2 182 49.5
Haze_14856 Corylus avellana HOM05D002631 ORTHO05D002861 1.6e-34 150.2 191 48.7
Thecc.04G033600 Theobroma cacao HOM05D002631 ORTHO05D002861 6.2e-34 148.3 186 50.0
CiPaw.04G035400 Carya illinoinensis HOM05D002631 ORTHO05D002861 3.1e-33 146.0 182 48.9
Gohir.D04G077800 Gossypium hirsutum HOM05D002631 ORTHO05D002861 7.6e-32 141.4 187 48.7
Gorai.012G087600 Gossypium raimondii HOM05D002631 ORTHO05D002861 7.6e-32 141.4 187 48.7
Manes.15G159300 Manihot esculenta HOM05D002631 ORTHO05D002861 1.3e-31 140.6 191 45.0
Potri.001G332500 Populus trichocarpa HOM05D002631 ORTHO05D002861 1.3e-31 140.6 185 48.1
Sabra16G0213400 Salix brachista HOM05D002631 ORTHO05D002861 4.9e-31 138.7 185 47.6
Prupe.3G303900 Prunus persica HOM05D002631 ORTHO05D002861 1.4e-30 137.1 173 49.1
Gohir.D09G035700 Gossypium hirsutum HOM05D002631 ORTHO05D002861 2.5e-30 136.3 167 52.1
Gorai.006G040600 Gossypium raimondii HOM05D002631 ORTHO05D002861 2.5e-30 136.3 167 52.1
Gohir.A09G034900 Gossypium hirsutum HOM05D002631 ORTHO05D002861 5.5e-30 135.2 167 52.1
CsaV3_3G027170 Cucumis sativus L. HOM05D002631 ORTHO05D002861 9.3e-30 134.4 168 49.4
MELO3C014870.2 Cucumis melo HOM05D002631 ORTHO05D002861 1.2e-29 134.0 168 49.4
Gohir.A05G339300 Gossypium hirsutum HOM05D002631 ORTHO05D002861 1.2e-29 134.0 146 54.8
Manes.17G104100 Manihot esculenta HOM05D002631 ORTHO05D002861 1.2e-29 134.0 177 48.0
Hma1.2p1_0279F.1_g112600 Hydrangea macrophylla HOM05D002631 ORTHO05D002861 1.6e-29 133.7 186 45.2
Duzib264G0548 Durio zibethinus HOM05D002631 ORTHO05D002861 1.3e-28 130.6 188 46.8
Phvul.001G095300 Phaseolus vulgaris HOM05D002631 ORTHO05D002861 1.3e-28 130.6 185 45.9
Duzib187G0830 Durio zibethinus HOM05D002631 ORTHO05D002861 1.8e-28 130.2 189 47.6
Glyma.16G058500 Glycine max HOM05D002631 ORTHO05D002861 8.7e-28 127.9 185 45.4
Glyma.19G088700 Glycine max HOM05D002631 ORTHO05D002861 8.7e-28 127.9 182 45.6
QL02p071781 Quercus lobata HOM05D002631 ORTHO05D002861 4.3e-27 125.6 208 42.8
Gohir.D07G234300 Gossypium hirsutum HOM05D002631 ORTHO05D002861 5.6e-27 125.2 187 46.0
Gorai.001G269900 Gossypium raimondii HOM05D002631 ORTHO05D002861 1.3e-26 124.0 187 46.0
Gohir.A07G227200 Gossypium hirsutum HOM05D002631 ORTHO05D002861 1.6e-26 123.6 187 45.5
MD17G1013900 Malus domestica HOM05D002631 ORTHO05D002861 6.2e-26 121.7 170 45.3
Sed0018875 Sechium edule HOM05D002631 ORTHO05D002861 8.2e-26 121.3 171 44.4
ClCG05G013370 Citrullus lanatus HOM05D002631 ORTHO05D002861 1.8e-25 120.2 169 49.1
Atru.chr6.2535 Acer truncatum HOM05D002631 ORTHO05D002861 4.0e-25 119.0 182 46.7
Ciclev10016522m.g Citrus clementina HOM05D002631 ORTHO05D002861 5.3e-25 118.6 189 43.4
CANSAT64G0464 Cannabis sativa HOM05D002631 ORTHO05D002861 9.0e-25 117.9 187 42.8
CSS0020364 Camellia sinensis var. sinensis HOM05D002631 ORTHO05D002861 1.5e-24 117.1 182 41.8
VMungo1383G3513 Vigna mungo HOM05D002631 ORTHO05D002861 3.4e-24 115.9 184 42.4
Actinidia04441 Actinidia chinensis HOM05D002631 ORTHO05D002861 1.3e-23 114.0 185 40.5
Hma1.2p1_1278F.1_g272420 Hydrangea macrophylla HOM05D002631 ORTHO05D002861 1.7e-23 113.6 180 40.0
vmacro18333 Vaccinium macrocarpon HOM05D002631 ORTHO05D002861 1.7e-23 113.6 176 42.0
Rhsim10G0007400 Rhododendron simsii HOM05D002631 ORTHO05D002861 2.9e-23 112.8 180 41.7
Phvul.004G055100 Phaseolus vulgaris HOM05D002631 ORTHO05D002861 2.5e-22 109.8 178 43.8
Sed0001821 Sechium edule HOM05D002631 ORTHO05D002861 2.5e-22 109.8 162 44.4
Actinidia30886 Actinidia chinensis HOM05D002631 ORTHO05D002861 3.2e-22 109.4 179 41.3
Lj1g0010837 Lotus japonicus HOM05D002631 ORTHO05D002861 3.2e-22 109.4 180 41.7
Actinidia36186 Actinidia chinensis HOM05D002631 ORTHO05D002861 5.5e-22 108.6 145 46.2
Lalb_Chr21g0317531 Lupinus albus HOM05D002631 ORTHO05D002861 5.5e-22 108.6 177 42.4
TWI12G0788 Tripterygium wilfordii HOM05D002631 ORTHO05D002861 1.6e-21 107.1 162 46.3
Nn3g16504 Nelumbo nucifera HOM05D002631 ORTHO05D002861 2.1e-21 106.7 183 39.9
MBI07_g31942_MAGBIO Magnolia biondii HOM05D002631 ORTHO05D002861 2.7e-21 106.3 181 40.3
Hma1.2p1_2105F.1_g314170 Hydrangea macrophylla HOM05D002631 ORTHO05D002861 1.0e-20 104.4 180 38.3
MD09G1013200 Malus domestica HOM05D002631 ORTHO05D002861 1.0e-20 104.4 174 42.5
Glyma.05G076300 Glycine max HOM05D002631 ORTHO05D002861 2.3e-20 103.2 175 40.6
Actinidia05911 Actinidia chinensis HOM05D002631 ORTHO05D002861 5.1e-20 102.1 180 41.1
Lj7A608T54 Lonicera japonica HOM05D002631 ORTHO05D002861 6.7e-20 101.7 175 40.0
Rhsim08G0043900 Rhododendron simsii HOM05D002631 ORTHO05D002861 1.1e-19 100.9 174 37.4
RcHm_v2.0_Chr2g0175231 Rosa chinensis HOM05D002631 ORTHO05D002861 1.1e-19 100.9 190 40.5
Medtr7g029620 Medicago truncatula HOM05D002631 ORTHO05D002861 2.5e-19 99.8 184 40.2
Oeu011958.2 Olea europaea HOM05D002631 ORTHO05D002861 5.7e-19 98.6 180 37.2
FAN02G3740 Fragaria x ananassa HOM05D002631 ORTHO05D002861 9.7e-19 97.8 190 40.0
FAN05G0255 Fragaria x ananassa HOM05D002631 ORTHO05D002861 9.7e-19 97.8 190 40.0
TAR629G0052 Trochodendron aralioides HOM05D002631 ORTHO05D002861 1.6e-18 97.1 181 38.1
VMungo0464G1570 Vigna mungo HOM05D002631 ORTHO05D002861 2.2e-18 96.7 178 39.3
DCAR_021775 Daucus carota HOM05D002631 ORTHO05D002861 2.8e-18 96.3 157 42.7
TWI56G0933 Tripterygium wilfordii HOM05D002631 ORTHO05D002861 2.8e-18 96.3 162 43.2
Glyma.19G074200 Glycine max HOM05D002631 ORTHO05D002861 3.7e-18 95.9 178 39.9
arahy.Tifrunner.gnm1.ann1.XL7NKK Arachis hypogaea HOM05D002631 ORTHO05D002861 4.8e-18 95.5 172 40.1
Dinv10972 Davidia involucrata HOM05D002631 ORTHO05D002861 4.8e-18 95.5 174 40.8
Ca_04425_v3 Cicer arietinum L. HOM05D002631 ORTHO05D002861 6.3e-18 95.1 175 36.0
FvH4_6g53190 Fragaria vesca HOM05D002631 ORTHO05D002861 6.3e-18 95.1 190 39.5
FAN14G5847 Fragaria x ananassa HOM05D002631 ORTHO05D002861 6.3e-18 95.1 190 39.5
Nn4g22361 Nelumbo nucifera HOM05D002631 ORTHO05D002861 8.2e-18 94.7 183 37.2
Medtr6g023580 Medicago truncatula HOM05D002631 ORTHO05D002861 1.4e-17 94.0 176 37.5
Lalb_Chr14g0363261 Lupinus albus HOM05D002631 ORTHO05D002861 2.4e-17 93.2 184 36.4
TPR.G38258 Trifolium pratense HOM05D002631 ORTHO05D002861 6.9e-17 91.7 184 39.1
Peaxi162Scf00700g00133 Petunia axillaris HOM05D002631 ORTHO05D002861 1.2e-16 90.9 179 39.7
TPR.G7520 Trifolium pratense HOM05D002631 ORTHO05D002861 2.0e-16 90.1 180 39.4
Eucgr.I01656 Eucalyptus grandis HOM05D002631 ORTHO05D002861 2.6e-16 89.7 124 44.4
arahy.Tifrunner.gnm1.ann1.B2269S Arachis hypogaea HOM05D002631 ORTHO05D002861 3.4e-16 89.4 172 39.5
PGR142G2012 Punica granatum HOM05D002631 ORTHO05D002861 3.4e-16 89.4 192 35.9
TAR371G1118 Trochodendron aralioides HOM05D002631 ORTHO05D002861 1.3e-15 87.4 181 35.9
Lj2g0026031 Lotus japonicus HOM05D002631 ORTHO05D002861 2.2e-15 86.7 176 40.9
Psat1g085600 Pisum sativum HOM05D002631 ORTHO05D002861 2.2e-15 86.7 176 35.8
FAN09G0528 Fragaria x ananassa HOM05D002631 ORTHO05D002861 8.5e-15 84.7 173 38.2
Oeu035217.1 Olea europaea HOM05D002631 ORTHO05D002861 5.5e-14 82.0 171 36.8
GSVIVG01010390001 Vitis vinifera HOM05D002631 ORTHO05D002861 1.2e-13 80.9 128 40.6
arahy.Tifrunner.gnm1.ann1.Q8Q4RG Arachis hypogaea HOM05D002631 ORTHO05D002861 7.9e-13 78.2 184 38.0
CAN.G1751.2 Capsicum annuum HOM05D002631 ORTHO05D002861 1.4e-12 77.4 175 35.4
Nitab4.5_0000559g0430 Nicotiana tabacum HOM05D002631 ORTHO05D002861 1.4e-12 77.4 180 34.4
Migut.F00077 Erythranthe guttata HOM05D002631 ORTHO05D002861 2.3e-12 76.6 164 38.4
Dinv33351 Davidia involucrata HOM05D000172 ORTHO05D000781 3.0e-12 76.3 151 39.1
Psat7g264080 Pisum sativum HOM05D002631 ORTHO05D002861 3.0e-12 76.3 182 37.4
COL.COLO4_20357 Corchorus olitorius HOM05D002631 ORTHO05D002861 5.1e-12 75.5 135 39.3
THA.LOC104805334 Tarenaya hassleriana HOM05D002631 ORTHO05D002861 5.1e-12 75.5 174 36.8
arahy.Tifrunner.gnm1.ann1.B4KLFS Arachis hypogaea HOM05D002631 ORTHO05D002861 8.8e-12 74.7 179 38.0
MBI07_g46198_MAGBIO Magnolia biondii HOM05D002631 ORTHO05D002861 1.5e-11 73.9 154 37.0
Nitab4.5_0005161g0010 Nicotiana tabacum HOM05D002631 ORTHO05D002861 1.5e-11 73.9 180 34.4
Sabra10G0046900 Salix brachista HOM05D002631 ORTHO05D002861 1.5e-11 73.9 133 40.6
Aqoxy5G03422 Aquilegia oxysepala HOM05D002631 ORTHO05D002861 2.5e-11 73.2 179 33.5
PGSC0003DMG400013426 Solanum tuberosum HOM05D002631 ORTHO05D002861 3.3e-11 72.8 174 33.9
Duzib268G1177 Durio zibethinus HOM05D002631 ORTHO05D002861 5.7e-11 72.0 136 38.2
THA.LOC104823975 Tarenaya hassleriana HOM05D002631 ORTHO05D002861 5.7e-11 72.0 171 33.9
MSTRG.3083 Avicennia marina HOM05D002631 ORTHO05D002861 7.4e-11 71.6 181 35.9
Thecc.02G277100 Theobroma cacao HOM05D002631 ORTHO05D002861 7.4e-11 71.6 134 39.6
Aqoxy3G01502 Aquilegia oxysepala HOM05D002631 ORTHO05D002861 1.3e-10 70.9 120 41.7
Oeu013645.3 Olea europaea HOM05D000172 ORTHO05D000781 1.7e-10 70.5 182 33.0
Solyc03g005030.3 Solanum lycopersicum HOM05D002631 ORTHO05D002861 1.7e-10 70.5 170 35.3
Potri.010G058700 Populus trichocarpa HOM05D002631 ORTHO05D002861 2.2e-10 70.1 172 33.1
Sp2g16340 Schrenkiella parvula HOM05D002631 ORTHO05D002861 2.2e-10 70.1 163 36.2
Cc07_g00670 Coffea canephora HOM05D002631 ORTHO05D002861 6.3e-10 68.6 156 35.9
Thhalv10004813m.g Eutrema salsugineum HOM05D002631 ORTHO05D002861 6.3e-10 68.6 163 36.2
MSTRG.15564 Avicennia marina HOM05D002631 ORTHO05D002861 8.2e-10 68.2 164 36.6
Lalb_Chr02g0157791 Lupinus albus HOM05D002631 ORTHO05D002861 8.2e-10 68.2 168 35.1
Hund13051 Selenicereus undatus HOM05D002631 ORTHO05D002861 8.2e-10 68.2 202 32.7
SalBow4G2864 Salvia bowleyana HOM05D002631 ORTHO05D002861 1.1e-09 67.8 170 33.5
Ah.10g032580 Amaranthus hybridus HOM05D002631 ORTHO05D002861 1.4e-09 67.4 177 33.3
Duzib251G0117 Durio zibethinus HOM05D002631 ORTHO05D002861 1.4e-09 67.4 133 38.3
TAR371G0695 Trochodendron aralioides HOM05D002631 ORTHO05D002861 1.4e-09 67.4 146 36.3
ClCG11G007020 Citrullus lanatus HOM05D002631 ORTHO05D002861 1.8e-09 67.0 160 33.8
Sopen03g001040 Solanum pennellii HOM05D002631 ORTHO05D002861 1.8e-09 67.0 100 47.0
Haze_12389 Corylus avellana HOM05D002631 ORTHO05D002861 2.4e-09 66.6 132 40.9
SHI03908 Sapria himalayana HOM05D002631 ORTHO05D002861 2.4e-09 66.6 163 34.4
A02p35180 Brassica napus HOM05D002631 ORTHO05D002861 3.1e-09 66.2 161 35.4
BraA02t08525Z Brassica rapa HOM05D002631 ORTHO05D002861 3.1e-09 66.2 161 35.4
SalBow4G0924 Salvia bowleyana HOM05D002631 ORTHO05D002861 3.1e-09 66.2 170 32.9
Sabra08G0134200 Salix brachista HOM05D002631 ORTHO05D002861 4.1e-09 65.9 108 39.8
BcaC03g17437 Brassica carinata HOM05D002631 ORTHO05D002861 5.3e-09 65.5 161 34.8
C02p53850 Brassica napus HOM05D002631 ORTHO05D002861 5.3e-09 65.5 161 34.8
BolC2t11453H Brassica oleracea HOM05D002631 ORTHO05D002861 5.3e-09 65.5 161 34.8
DCAR_015090 Daucus carota HOM05D002631 ORTHO05D002861 5.3e-09 65.5 153 31.4
Potri.008G176300 Populus trichocarpa HOM05D002631 ORTHO05D002861 9.1e-09 64.7 108 40.7
THA.LOC104825613 Tarenaya hassleriana HOM05D002631 ORTHO05D002861 9.1e-09 64.7 168 31.5
BraA06t27065Z Brassica rapa HOM05D002631 ORTHO05D002861 1.2e-08 64.3 164 34.1
DCAR_011315 Daucus carota HOM05D002631 ORTHO05D002861 1.2e-08 64.3 149 31.5
BcaC06g33843 Brassica carinata HOM05D002631 ORTHO05D002861 1.5e-08 63.9 159 35.8
A06p41400 Brassica napus HOM05D002631 ORTHO05D002861 1.5e-08 63.9 164 33.5
CsaV3_2G034190 Cucumis sativus L. HOM05D002631 ORTHO05D002861 2.0e-08 63.5 161 32.9
Migut.K01455 Erythranthe guttata HOM05D002631 ORTHO05D002861 2.0e-08 63.5 156 30.8
QL03p054083 Quercus lobata HOM05D002631 ORTHO05D002861 2.0e-08 63.5 133 36.1
EL10Ac2g03218 Beta vulgaris HOM05D002631 ORTHO05D002861 2.6e-08 63.2 194 28.9
QL03p053884 Quercus lobata HOM05D002631 ORTHO05D002861 2.6e-08 63.2 133 35.3
GSVIVG01001809001 Vitis vinifera HOM05D002631 ORTHO05D002861 4.5e-08 62.4 93 43.0
QL03p053810 Quercus lobata HOM05D002631 ORTHO05D002861 5.9e-08 62.0 133 36.8
C07p36260 Brassica napus HOM05D002631 ORTHO05D002861 7.7e-08 61.6 162 33.3
BcaC06g33849 Brassica carinata HOM05D002631 ORTHO05D002861 1.0e-07 61.2 162 33.3
BolC7t44140H Brassica oleracea HOM05D002631 ORTHO05D002861 1.0e-07 61.2 162 33.3
Ciclev10032698m.g Citrus clementina HOM05D002631 ORTHO05D002861 1.0e-07 61.2 164 33.5
Eucgr.J02319 Eucalyptus grandis HOM05D002631 ORTHO05D002861 1.0e-07 61.2 169 31.4
Cfa009334 Carpinus fangiana HOM05D002631 ORTHO05D002861 1.7e-07 60.5 141 39.0
AT3G27210 Arabidopsis thaliana HOM05D002631 ORTHO05D002861 2.9e-07 59.7 140 38.6
Oeu011758.1 Olea europaea HOM05D002631 ORTHO05D002861 2.9e-07 59.7 120 39.2
AL5G16340 Arabidopsis lyrata HOM05D002631 ORTHO05D002861 3.8e-07 59.3 139 37.4
Peaxi162Scf00420g00049 Petunia axillaris HOM05D002631 ORTHO05D002861 3.8e-07 59.3 180 32.8
PGR102G0668 Punica granatum HOM05D002631 ORTHO05D002861 3.8e-07 59.3 98 42.9
SGA_v2.0_scaffold154G37166 Striga asiatica HOM05D002631 ORTHO05D002861 5.0e-07 58.9 168 29.2
Carub.0005s0544 Capsella rubella HOM05D002631 ORTHO05D002861 6.5e-07 58.5 100 44.0
Manes.13G018000 Manihot esculenta HOM05D002631 ORTHO05D002861 8.5e-07 58.2 137 33.6
PSO478G2931 Papaver somniferum HOM05D002631 ORTHO05D002861 8.5e-07 58.2 143 32.2
BcaB07g30180 Brassica carinata HOM05D002631 ORTHO05D002861 1.1e-06 57.8 163 35.0
CAN.G473.87 Capsicum annuum HOM05D002631 ORTHO05D002861 1.1e-06 57.8 122 38.5
MSTRG.24087 Avicennia marina HOM05D002631 ORTHO05D002861 1.4e-06 57.4 115 36.5
PSO782G1501 Papaver somniferum HOM05D002631 ORTHO05D002861 1.4e-06 57.4 112 38.4
Solyc02g094030.3 Solanum lycopersicum HOM05D002631 ORTHO05D002861 1.4e-06 57.4 121 37.2
unitig_21.g20478 Utricularia gibba HOM05D001287 ORTHO05D001226 1.4e-06 57.4 129 35.7
CARHR148420 Cardamine hirsuta HOM05D002631 ORTHO05D002861 2.5e-06 56.6 162 35.8
MELO3C008201.2 Cucumis melo HOM05D002631 ORTHO05D002861 2.5e-06 56.6 161 32.9
Gohir.A01G154900 Gossypium hirsutum HOM05D002631 ORTHO05D002861 2.5e-06 56.6 88 44.3
Gohir.D01G155000 Gossypium hirsutum HOM05D002631 ORTHO05D002861 2.5e-06 56.6 88 44.3
Gorai.002G191900 Gossypium raimondii HOM05D002631 ORTHO05D002861 2.5e-06 56.6 88 44.3
PSO063G6187 Papaver somniferum HOM05D002631 ORTHO05D002861 3.2e-06 56.2 112 37.5
SGA_v2.0_scaffold44G16907 Striga asiatica HOM05D002631 ORTHO05D002861 3.2e-06 56.2 102 41.2
Sopen02g038670 Solanum pennellii HOM05D002631 ORTHO05D002861 5.5e-06 55.5 121 37.2
TAR625G0026 Trochodendron aralioides HOM05D002631 ORTHO05D002861 5.5e-06 55.5 102 43.1


User provided reference genes

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