Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c32193 Carica papaya HOM05D005279 ORTHO05D006757 3.6e-227 791.2 386 100.0
THA.LOC104802949 Tarenaya hassleriana HOM05D005279 ORTHO05D006757 9.3e-167 590.5 386 71.2
Atru.chr12.2109 Acer truncatum HOM05D005279 ORTHO05D006757 3.0e-165 585.5 386 71.0
Potri.013G087400 Populus trichocarpa HOM05D005279 ORTHO05D006757 1.6e-163 579.7 391 70.8
Ciclev10011262m.g Citrus clementina HOM05D005279 ORTHO05D006757 8.2e-163 577.4 386 70.5
Thhalv10012976m.g Eutrema salsugineum HOM05D005279 ORTHO05D006757 1.1e-162 577.0 386 70.2
MD12G1258400 Malus domestica HOM05D005279 ORTHO05D006757 9.1e-162 573.9 387 70.5
AT5G16520 Arabidopsis thaliana HOM05D005279 ORTHO05D006757 7.7e-161 570.9 386 68.7
CARHR196710 Cardamine hirsuta HOM05D005279 ORTHO05D006757 1.0e-160 570.5 386 69.7
Sp6g27630 Schrenkiella parvula HOM05D005279 ORTHO05D006757 1.3e-160 570.1 386 68.7
Aa31LG11G13130 Aethionema arabicum HOM05D005279 ORTHO05D006757 1.7e-160 569.7 386 68.4
Sabra13G0070000 Salix brachista HOM05D005279 ORTHO05D006757 1.7e-160 569.7 390 70.3
Carub.0006s1472 Capsella rubella HOM05D005279 ORTHO05D006757 2.2e-160 569.3 386 68.7
Cfa006283 Carpinus fangiana HOM05D005279 ORTHO05D006757 6.5e-160 567.8 386 70.7
Prupe.6G359100 Prunus persica HOM05D005279 ORTHO05D006757 6.5e-160 567.8 389 71.5
CANSAT54G1354 Cannabis sativa HOM05D005279 ORTHO05D006757 8.5e-160 567.4 387 70.3
Manes.09G184200 Manihot esculenta HOM05D005279 ORTHO05D006757 8.5e-160 567.4 384 70.1
AL6G27470 Arabidopsis lyrata HOM05D005279 ORTHO05D006757 2.5e-159 565.8 386 68.4
A03p07830 Brassica napus HOM05D005279 ORTHO05D006757 4.2e-159 565.1 387 68.7
C03p09050 Brassica napus HOM05D005279 ORTHO05D006757 7.2e-159 564.3 387 68.7
BolC3t13400H Brassica oleracea HOM05D005279 ORTHO05D006757 1.6e-158 563.1 387 68.7
TWI23G0564 Tripterygium wilfordii HOM05D005279 ORTHO05D006757 2.1e-158 562.8 387 70.3
Haze_04526 Corylus avellana HOM05D005279 ORTHO05D006757 2.7e-158 562.4 386 70.7
Duzib128G1767 Durio zibethinus HOM05D005279 ORTHO05D006757 3.6e-158 562.0 383 71.3
Duzib177G0028 Durio zibethinus HOM05D005279 ORTHO05D006757 3.6e-158 562.0 383 71.0
FvH4_6g00750 Fragaria vesca HOM05D005279 ORTHO05D006757 1.0e-157 560.5 389 68.9
FAN14G2044 Fragaria x ananassa HOM05D005279 ORTHO05D006757 1.0e-157 560.5 389 68.9
Eucgr.H01378 Eucalyptus grandis HOM05D005279 ORTHO05D006757 1.8e-157 559.7 386 70.5
Phvul.008G055900 Phaseolus vulgaris HOM05D005279 ORTHO05D006757 2.3e-157 559.3 384 70.1
FAN02G0830 Fragaria x ananassa HOM05D005279 ORTHO05D006757 3.9e-157 558.5 389 68.9
Dinv29119 Davidia involucrata HOM05D005279 ORTHO05D006757 5.1e-157 558.1 385 70.4
FAN05G0195 Fragaria x ananassa HOM05D005279 ORTHO05D006757 5.1e-157 558.1 389 68.9
Ca_07964_v3 Cicer arietinum L. HOM05D005279 ORTHO05D006757 8.8e-157 557.4 386 68.4
COL.COLO4_19830 Corchorus olitorius HOM05D005279 ORTHO05D006757 1.1e-156 557.0 383 69.5
RcHm_v2.0_Chr3g0448231 Rosa chinensis HOM05D005279 ORTHO05D006757 1.5e-156 556.6 389 69.4
FAN09G4620 Fragaria x ananassa HOM05D005279 ORTHO05D006757 5.7e-156 554.7 389 68.6
Gohir.A08G223900 Gossypium hirsutum HOM05D005279 ORTHO05D006757 2.8e-155 552.4 383 69.7
Aqoxy2G03953 Aquilegia oxysepala HOM05D005279 ORTHO05D006757 6.3e-155 551.2 387 68.7
arahy.Tifrunner.gnm1.ann1.X9YPPN Arachis hypogaea HOM05D005279 ORTHO05D006757 6.3e-155 551.2 384 68.8
TAR633G0866 Trochodendron aralioides HOM05D005279 ORTHO05D006757 1.1e-154 550.4 385 68.3
THA.LOC104827466 Tarenaya hassleriana HOM05D005279 ORTHO05D006757 3.1e-154 548.9 374 69.0
TPR.G32005 Trifolium pratense HOM05D005279 ORTHO05D006757 3.1e-154 548.9 386 68.1
VMungo1383G2490 Vigna mungo HOM05D005279 ORTHO05D006757 3.1e-154 548.9 384 68.5
Glyma.18G240300 Glycine max HOM05D005279 ORTHO05D006757 9.1e-154 547.4 384 68.2
Gohir.D08G244200 Gossypium hirsutum HOM05D005279 ORTHO05D006757 9.1e-154 547.4 383 69.2
Sed0005684 Sechium edule HOM05D005279 ORTHO05D006757 2.6e-153 545.8 386 67.6
CSS0033137 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 4.5e-153 545.0 385 68.6
CSS0033709 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 4.5e-153 545.0 385 68.6
Lalb_Chr19g0126771 Lupinus albus HOM05D005279 ORTHO05D006757 4.5e-153 545.0 386 69.2
Glyma.09G252300 Glycine max HOM05D005279 ORTHO05D006757 1.0e-152 543.9 384 67.7
Nn1g08317 Nelumbo nucifera HOM05D005279 ORTHO05D006757 1.7e-152 543.1 385 66.8
Lj1g0001090 Lotus japonicus HOM05D005279 ORTHO05D006757 2.9e-152 542.3 384 68.5
CiPaw.08G116500 Carya illinoinensis HOM05D005279 ORTHO05D006757 5.0e-152 541.6 384 67.4
Gorai.004G260500 Gossypium raimondii HOM05D005279 ORTHO05D006757 5.0e-152 541.6 383 68.9
ClCG11G011000 Citrullus lanatus HOM05D005279 ORTHO05D006757 8.5e-152 540.8 386 67.4
Medtr7g079510 Medicago truncatula HOM05D005279 ORTHO05D006757 4.2e-151 538.5 386 65.8
BcaB01g04978 Brassica carinata HOM05D005279 ORTHO05D006757 5.5e-151 538.1 387 66.7
Oeu040486.2 Olea europaea HOM05D005279 ORTHO05D006757 5.5e-151 538.1 389 66.3
MELO3C008759.2 Cucumis melo HOM05D005279 ORTHO05D006757 1.6e-150 536.6 386 66.8
PGR031G1864 Punica granatum HOM05D005279 ORTHO05D006757 2.1e-150 536.2 386 65.8
PSO675G1387 Papaver somniferum HOM05D005279 ORTHO05D006757 3.6e-150 535.4 384 67.4
vmacro10395 Vaccinium macrocarpon HOM05D005279 ORTHO05D006757 3.6e-150 535.4 387 65.4
Oeu010147.1 Olea europaea HOM05D005279 ORTHO05D006757 1.4e-149 533.5 391 66.8
Rhsim09G0131400 Rhododendron simsii HOM05D005279 ORTHO05D006757 5.2e-149 531.6 402 64.7
Solyc04g051310.4 Solanum lycopersicum HOM05D005279 ORTHO05D006757 1.1e-148 530.4 388 65.5
Sopen04g022730 Solanum pennellii HOM05D005279 ORTHO05D006757 1.1e-148 530.4 388 65.5
Sc09g0001590 Simmondsia chinensis HOM05D005279 ORTHO05D006757 2.6e-148 529.3 385 65.5
AUR62000356 Chenopodium quinoa HOM05D005279 ORTHO05D006757 5.7e-148 528.1 384 65.4
CsaV3_2G009490 Cucumis sativus L. HOM05D005279 ORTHO05D006757 5.7e-148 528.1 386 66.1
MSTRG.320 Avicennia marina HOM05D005279 ORTHO05D006757 9.7e-148 527.3 388 66.5
Sed0008551 Sechium edule HOM05D005279 ORTHO05D006757 8.5e-144 514.2 387 64.6
Migut.F01884 Erythranthe guttata HOM05D005279 ORTHO05D006757 5.5e-143 511.5 391 65.0
Cc09_g03410 Coffea canephora HOM05D005279 ORTHO05D006757 3.6e-142 508.8 387 63.8
Peaxi162Scf00994g00010 Petunia axillaris HOM05D005279 ORTHO05D006757 6.1e-142 508.1 388 63.7
Hund29802 Selenicereus undatus HOM05D005279 ORTHO05D006757 2.3e-141 506.1 385 62.6
Hund29803 Selenicereus undatus HOM05D005279 ORTHO05D006757 2.3e-141 506.1 385 62.6
EL10Ac4g09419 Beta vulgaris HOM05D005279 ORTHO05D006757 5.2e-141 505.0 385 61.8
Ah.04g158770 Amaranthus hybridus HOM05D005279 ORTHO05D006757 4.4e-140 501.9 385 62.3
SalBow6G4947 Salvia bowleyana HOM05D005279 ORTHO05D006757 1.7e-139 500.0 389 63.8
HanXRQChr05g0156961 Helianthus annuus HOM05D005279 ORTHO05D006757 1.4e-138 496.9 391 63.9
Lsat_1_v5_gn_9_48740 Lactuca sativa HOM05D005279 ORTHO05D006757 5.9e-137 491.5 389 62.0
SGA_v2.0_scaffold122G33172 Striga asiatica HOM05D005279 ORTHO05D006757 5.9e-137 491.5 390 62.6
Lsat_1_v5_gn_8_2100 Lactuca sativa HOM05D005279 ORTHO05D006757 5.0e-136 488.4 389 62.7
SHI13733 Sapria himalayana HOM05D005279 ORTHO05D006757 6.5e-136 488.0 388 62.1
Hund07324 Selenicereus undatus HOM05D005279 ORTHO05D006757 1.6e-134 483.4 399 60.2
DCAR_023849 Daucus carota HOM05D005279 ORTHO05D006757 1.1e-130 470.7 392 58.2
ATR0609G131 Amborella trichopoda HOM05D005279 ORTHO05D006757 1.4e-130 470.3 386 57.3
MBI07_g25290_MAGBIO Magnolia biondii HOM05D005279 ORTHO05D006757 7.0e-130 468.0 365 61.9
HanXRQChr11g0323931 Helianthus annuus HOM05D005279 ORTHO05D006757 6.8e-125 451.4 389 57.1
GSVIVG01019132001 Vitis vinifera HOM05D005279 ORTHO05D006757 4.4e-124 448.7 308 70.1
Lju5221C0T3 Lonicera japonica HOM05D005279 ORTHO05D006757 2.4e-122 443.0 383 58.5
unitig_26.g8932 Utricularia gibba HOM05D005279 ORTHO05D006757 5.4e-122 441.8 389 58.1
ECA232G1216 Erigeron canadensis HOM05D005279 ORTHO05D006757 7.5e-116 421.4 308 65.3
Lj1A580T7 Lonicera japonica HOM05D005279 ORTHO05D006757 4.9e-115 418.7 345 59.1
CDE09G0872 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 1.8e-114 416.8 346 57.8
ECA233G5391 Erigeron canadensis HOM05D005279 ORTHO05D006757 5.4e-114 415.2 309 64.7
SEGI_07718 Sequoiadendron giganteum HOM05D005279 ORTHO05D006757 5.6e-111 405.2 387 51.4
QL01p050313 Quercus lobata HOM05D005279 ORTHO05D006757 3.6e-110 402.5 264 73.5
arahy.Tifrunner.gnm1.ann1.GMHU8S Arachis hypogaea HOM05D005279 ORTHO05D006757 8.6e-104 381.3 384 51.8
Nitab4.5_0000276g0070 Nicotiana tabacum HOM05D005279 ORTHO05D006757 8.6e-104 381.3 285 65.3
PGSC0003DMG402016935 Solanum tuberosum HOM05D005279 ORTHO05D006757 1.2e-102 377.5 257 70.0
Nitab4.5_0000456g0100 Nicotiana tabacum HOM05D005279 ORTHO05D006757 1.8e-101 373.6 277 66.4
Os01g0100500 Oryza sativa ssp. japonica HOM05D005279 ORTHO05D006757 3.2e-98 362.8 389 48.3
Zm00001eb017080 Zea mays HOM05D005279 ORTHO05D006757 1.5e-95 354.0 393 47.8
Zm00001eb334030 Zea mays HOM05D005279 ORTHO05D006757 7.3e-95 351.7 394 47.7
AUR62012181 Chenopodium quinoa HOM05D005279 ORTHO05D006757 8.9e-93 344.7 300 54.7
BraA03t10110Z Brassica rapa HOM05D005279 ORTHO05D006757 9.9e-92 341.3 236 67.8
Psat3g104240 Pisum sativum HOM05D005279 ORTHO05D006757 1.3e-88 330.9 233 66.1
EL10Ac2g04762 Beta vulgaris HOM05D005279 ORTHO05D006757 2.8e-86 323.2 302 53.0
CAN.G29.21 Capsicum annuum HOM05D005279 ORTHO05D006757 3.4e-84 316.2 221 67.0
HPP92_025240 Vanilla planifolia HOM05D005279 ORTHO05D006757 1.3e-83 314.3 387 45.7
AUR62006699 Chenopodium quinoa HOM05D005279 ORTHO05D006757 1.4e-82 310.8 237 59.9
CDE02G4206 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 2.1e-78 297.0 252 55.2
Hund16011 Selenicereus undatus HOM05D005279 ORTHO05D006757 2.1e-78 297.0 386 40.7
Dinv09865 Davidia involucrata HOM05D005279 ORTHO05D006757 8.1e-78 295.0 203 67.5
AagrBONN_evm.TU.Sc2ySwM_228.5255 Anthoceros agrestis HOM05D005279 ORTHO05D006757 4.2e-74 282.7 388 39.2
Thecc.05G206100 Theobroma cacao HOM05D005279 ORTHO05D006757 1.0e-72 278.1 202 64.9
CDE12G0554 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 1.4e-66 257.7 190 61.6
HPP92_021393 Vanilla planifolia HOM05D005279 ORTHO05D006757 1.5e-63 247.7 397 38.8
RcHm_v2.0_Chr7g0239281 Rosa chinensis HOM05D005279 ORTHO05D006757 2.2e-51 207.2 133 72.2
RcHm_v2.0_Chr2g0115301 Rosa chinensis HOM05D005279 ORTHO05D006757 1.4e-50 204.5 136 69.9
Ah.16g102880 Amaranthus hybridus HOM05D005279 ORTHO05D006757 6.3e-46 189.1 195 46.7
AUR62022817 Chenopodium quinoa HOM05D005279 ORTHO05D006757 5.3e-45 186.0 380 33.4
Nitab4.5_0000456g0110 Nicotiana tabacum HOM05D005279 ORTHO05D006757 4.1e-37 159.8 124 62.1
Nitab4.5_0000276g0080 Nicotiana tabacum HOM05D005279 ORTHO05D006757 2.6e-36 157.1 124 61.3
Actinidia34772 Actinidia chinensis HOM05D005279 ORTHO05D006757 1.2e-33 148.3 121 59.5
Actinidia38912 Actinidia chinensis HOM05D005279 ORTHO05D006757 4.4e-31 139.8 95 67.4
Hma1.2p1_0171F.1_g075730 Hydrangea macrophylla HOM05D005279 ORTHO05D006757 5.3e-21 106.3 88 61.4


User provided reference genes

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