Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c31793 Carica papaya HOM05D007339 ORTHO05D009302 1.0e-240 836.3 413 100.0
Gohir.D12G235400 Gossypium hirsutum HOM05D007339 ORTHO05D009302 5.9e-151 538.1 353 75.6
Gorai.008G251600 Gossypium raimondii HOM05D007339 ORTHO05D009302 1.7e-150 536.6 353 75.4
COL.COLO4_21749 Corchorus olitorius HOM05D007339 ORTHO05D009302 1.8e-147 526.6 353 74.5
Actinidia01410 Actinidia chinensis HOM05D007339 ORTHO05D009302 2.2e-145 519.6 348 75.3
Potri.003G135200 Populus trichocarpa HOM05D007339 ORTHO05D009302 6.3e-145 518.1 358 70.7
Sabra03G0097300 Salix brachista HOM05D007339 ORTHO05D009302 6.3e-145 518.1 358 70.7
TAR629G0408 Trochodendron aralioides HOM05D007339 ORTHO05D009302 1.1e-144 517.3 352 73.0
CSS0003086 Camellia sinensis var. sinensis HOM05D007339 ORTHO05D009302 2.4e-144 516.2 351 73.8
Nn1g08390 Nelumbo nucifera HOM05D007339 ORTHO05D009302 3.1e-144 515.8 368 69.3
TWI60G1048 Tripterygium wilfordii HOM05D007339 ORTHO05D009302 2.0e-143 513.1 353 71.4
Cfa012282 Carpinus fangiana HOM05D007339 ORTHO05D009302 2.7e-143 512.7 350 72.3
MD14G1117300 Malus domestica HOM05D007339 ORTHO05D009302 1.0e-142 510.8 352 69.9
Rhsim02G0238900 Rhododendron simsii HOM05D007339 ORTHO05D009302 5.0e-142 508.4 350 72.3
Glyma.05G213600 Glycine max HOM05D007339 ORTHO05D009302 6.5e-142 508.1 352 70.7
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea HOM05D007339 ORTHO05D009302 8.5e-142 507.7 353 70.8
DCAR_027743 Daucus carota HOM05D007339 ORTHO05D009302 1.9e-141 506.5 347 71.5
FAN08G0386 Fragaria x ananassa HOM05D007339 ORTHO05D009302 3.2e-141 505.8 352 70.7
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea HOM05D007339 ORTHO05D009302 4.2e-141 505.4 353 70.5
QL02p032076 Quercus lobata HOM05D007339 ORTHO05D009302 9.4e-141 504.2 350 71.1
CANSAT21G2628 Cannabis sativa HOM05D007339 ORTHO05D009302 2.1e-140 503.1 356 69.1
Cc08_g15580 Coffea canephora HOM05D007339 ORTHO05D009302 2.1e-140 503.1 352 71.6
FAN04G0801 Fragaria x ananassa HOM05D007339 ORTHO05D009302 2.7e-140 502.7 352 70.5
CsaV3_2G033870 Cucumis sativus L. HOM05D007339 ORTHO05D009302 4.7e-140 501.9 352 69.6
vmacro11423 Vaccinium macrocarpon HOM05D007339 ORTHO05D009302 1.0e-139 500.7 350 71.1
AUR62019785 Chenopodium quinoa HOM05D007339 ORTHO05D009302 1.4e-139 500.4 352 70.7
Lsat_1_v5_gn_3_9640 Lactuca sativa HOM05D007339 ORTHO05D009302 1.8e-139 500.0 349 69.1
Oeu008834.1 Olea europaea HOM05D007339 ORTHO05D009302 1.8e-139 500.0 352 67.3
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea HOM05D007339 ORTHO05D009302 5.2e-139 498.4 353 69.4
Dinv37563 Davidia involucrata HOM05D007339 ORTHO05D009302 5.2e-139 498.4 387 65.4
VMungo0251G0376 Vigna mungo HOM05D007339 ORTHO05D009302 6.8e-139 498.0 354 70.1
AUR62010789 Chenopodium quinoa HOM05D007339 ORTHO05D009302 8.8e-139 497.7 354 70.1
MELO3C008161.2 Cucumis melo HOM05D007339 ORTHO05D009302 1.2e-138 497.3 352 68.8
Sed0025077 Sechium edule HOM05D007339 ORTHO05D009302 2.2e-137 493.0 352 69.0
Eucgr.D01785 Eucalyptus grandis HOM05D007339 ORTHO05D009302 3.7e-137 492.3 352 67.0
Phvul.002G295000 Phaseolus vulgaris HOM05D007339 ORTHO05D009302 4.8e-137 491.9 354 68.9
FAN13G2341 Fragaria x ananassa HOM05D007339 ORTHO05D009302 6.3e-137 491.5 361 68.1
Lj4g0000586 Lotus japonicus HOM05D007339 ORTHO05D009302 6.3e-137 491.5 354 68.6
LjContig00001g0019220 Lotus japonicus HOM05D007339 ORTHO05D009302 6.3e-137 491.5 354 68.6
LjContig00001g0022561 Lotus japonicus HOM05D007339 ORTHO05D009302 6.3e-137 491.5 354 68.6
ClCG11G007690 Citrullus lanatus HOM05D007339 ORTHO05D009302 5.4e-136 488.4 352 67.9
EL10Ac5g12862 Beta vulgaris HOM05D007339 ORTHO05D009302 7.0e-136 488.0 353 69.7
Lalb_Chr05g0224341 Lupinus albus HOM05D007339 ORTHO05D009302 7.0e-136 488.0 353 68.3
Gohir.A12G231900 Gossypium hirsutum HOM05D007339 ORTHO05D009302 9.1e-136 487.6 323 74.6
HanXRQChr17g0535521 Helianthus annuus HOM05D007339 ORTHO05D009302 9.1e-136 487.6 349 68.5
Hund14247 Selenicereus undatus HOM05D007339 ORTHO05D009302 2.0e-135 486.5 349 69.3
PGSC0003DMG400005010 Solanum tuberosum HOM05D007339 ORTHO05D009302 2.7e-135 486.1 353 67.7
Solyc12g056150.2 Solanum lycopersicum HOM05D007339 ORTHO05D009302 1.0e-134 484.2 353 67.4
Sopen12g028660 Solanum pennellii HOM05D007339 ORTHO05D009302 1.3e-134 483.8 353 67.1
ECA246G1762 Erigeron canadensis HOM05D007339 ORTHO05D009302 1.7e-134 483.4 352 67.3
Migut.E01224 Erythranthe guttata HOM05D007339 ORTHO05D009302 3.8e-134 482.3 354 67.8
Ca_17504_v3 Cicer arietinum L. HOM05D007339 ORTHO05D009302 1.5e-133 480.3 352 67.0
Medtr8g099160 Medicago truncatula HOM05D007339 ORTHO05D009302 7.2e-133 478.0 355 66.8
PGR031G1180 Punica granatum HOM05D007339 ORTHO05D009302 9.4e-133 477.6 353 64.6
Thecc.03G290600 Theobroma cacao HOM05D007339 ORTHO05D009302 2.1e-132 476.5 323 73.4
Psat7g028320 Pisum sativum HOM05D007339 ORTHO05D009302 8.0e-132 474.6 351 65.2
Lj2A174T87 Lonicera japonica HOM05D007339 ORTHO05D009302 1.0e-131 474.2 354 68.6
Prupe.5G112000 Prunus persica HOM05D007339 ORTHO05D009302 2.6e-130 469.5 352 67.3
FAN13G1997 Fragaria x ananassa HOM05D007339 ORTHO05D009302 9.8e-130 467.6 361 65.7
Manes.02G014000 Manihot esculenta HOM05D007339 ORTHO05D009302 9.8e-130 467.6 322 72.0
SalBow1G6752 Salvia bowleyana HOM05D007339 ORTHO05D009302 2.8e-129 466.1 351 65.0
CAN.G868.7 Capsicum annuum HOM05D007339 ORTHO05D009302 6.3e-129 464.9 351 65.5
MBI11_g07997_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 1.1e-128 464.2 413 58.6
MBI11_g02478_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 1.4e-128 463.8 395 61.0
Sc01g0010030 Simmondsia chinensis HOM05D007339 ORTHO05D009302 3.1e-128 462.6 352 65.1
RcHm_v2.0_Chr7g0195891 Rosa chinensis HOM05D007339 ORTHO05D009302 4.1e-128 462.2 322 70.2
Haze_08703 Corylus avellana HOM05D007339 ORTHO05D009302 5.4e-128 461.8 351 67.5
CDE03G0219 Ceratophyllum demersum HOM05D007339 ORTHO05D009302 1.6e-127 460.3 354 65.3
Peaxi162Scf00117g01517 Petunia axillaris HOM05D007339 ORTHO05D009302 2.9e-126 456.1 351 63.2
GSVIVG01019463001 Vitis vinifera HOM05D007339 ORTHO05D009302 9.5e-125 451.1 353 64.0
unitig_22.g6184 Utricularia gibba HOM05D007339 ORTHO05D009302 5.7e-122 441.8 345 63.2
Ah.07g196890 Amaranthus hybridus HOM05D007339 ORTHO05D009302 3.7e-121 439.1 322 67.4
Eucgr.D01783 Eucalyptus grandis HOM05D007339 ORTHO05D009302 1.1e-120 437.6 332 63.6
ATR0585G140 Amborella trichopoda HOM05D007339 ORTHO05D009302 2.4e-120 436.4 352 59.9
HPP92_020016 Vanilla planifolia HOM05D007339 ORTHO05D009302 1.0e-118 431.0 352 58.2
Zm00001eb119650 Zea mays HOM05D007339 ORTHO05D009302 5.6e-117 425.2 352 58.8
Duzib068G0257 Durio zibethinus HOM05D007339 ORTHO05D009302 2.0e-114 416.8 290 71.7
Nitab4.5_0002381g0050 Nicotiana tabacum HOM05D007339 ORTHO05D009302 1.9e-112 410.2 351 58.7
CiPaw.11G126100 Carya illinoinensis HOM05D007339 ORTHO05D009302 5.4e-112 408.7 353 58.6
Nitab4.5_0004603g0010 Nicotiana tabacum HOM05D007339 ORTHO05D009302 4.3e-109 399.1 351 59.0
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis HOM05D007339 ORTHO05D009302 3.2e-96 356.3 343 51.9
SGA_v2.0_scaffold111G31453 Striga asiatica HOM05D007339 ORTHO05D009302 3.5e-95 352.8 371 51.8
Atru.chr9.2070 Acer truncatum HOM05D007339 ORTHO05D009302 2.3e-94 350.1 228 75.9
Mapoly0105s0048 Marchantia polymorpha HOM05D007339 ORTHO05D009302 7.3e-93 345.1 351 47.3
QL02p032031 Quercus lobata HOM05D007339 ORTHO05D009302 7.3e-93 345.1 246 68.7
Pp3c9_13440 Physcomitrium patens HOM05D007339 ORTHO05D009302 1.8e-91 340.5 345 49.9
Eucgr.D01784 Eucalyptus grandis HOM05D007339 ORTHO05D009302 2.6e-90 336.7 345 52.2
SMO340G0099 Selaginella moellendorffii HOM05D007339 ORTHO05D009302 5.1e-86 322.4 341 47.5
Atru.chr9.2069 Acer truncatum HOM05D007339 ORTHO05D009302 3.0e-70 270.0 308 50.3
Glyma.08G020200 Glycine max HOM05D007339 ORTHO05D009302 6.7e-70 268.9 209 67.5
CBR_g55541 Chara braunii HOM05D007339 ORTHO05D009302 3.4e-66 256.5 472 34.7
TPR.G3408 Trifolium pratense HOM05D007339 ORTHO05D009302 1.9e-61 240.7 177 64.4
TPR.G11473 Trifolium pratense HOM05D007339 ORTHO05D009302 3.7e-60 236.5 176 67.6
SEGI_02101 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 8.5e-41 172.2 130 64.6
SEGI_02509 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 8.8e-38 162.2 131 59.5
SEGI_37819 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 8.8e-38 162.2 131 59.5
AagrBONN_evm.TU.Sc2ySwM_368.3145 Anthoceros agrestis HOM05D007339 ORTHO05D009302 4.2e-32 143.3 162 48.8
Cre06.g285001 Chlamydomonas reinhardtii HOM05D007339 ORTHO05D009302 6.7e-30 136.0 261 36.4
SEGI_11472 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 6.8e-22 109.4 84 58.3
Os01g0221900 Oryza sativa ssp. japonica HOM05D007339 ORTHO05D009302 5.4e-19 99.8 87 47.1
QL02p032024 Quercus lobata HOM05D007339 ORTHO05D009302 1.0e-17 95.5 79 60.8
Sc20g0000110 Simmondsia chinensis HOM05D007339 ORTHO05D009302 3.2e-16 90.5 84 45.2
Dinv27585 Davidia involucrata HOM05D007339 ORTHO05D009302 2.7e-10 70.9 62 61.3
Rhsim12G0211900 Rhododendron simsii HOM05D003090 ORTHO05D003495 5.2e-06 56.6 48 58.3


User provided reference genes

Program Settings