Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c31519.2 Carica papaya HOM05D005549 ORTHO05D006771 2.3e-50 201.8 94 100.0
Thecc.03G015300 Theobroma cacao HOM05D005549 ORTHO05D006771 7.4e-33 143.7 85 80.0
Haze_07531 Corylus avellana HOM05D005549 ORTHO05D006771 1.6e-32 142.5 86 79.1
Actinidia19108 Actinidia chinensis HOM05D005549 ORTHO05D006771 4.8e-32 141.0 85 76.5
COL.COLO4_30080 Corchorus olitorius HOM05D005549 ORTHO05D006771 6.2e-32 140.6 85 77.6
Duzib205G0052 Durio zibethinus HOM05D005549 ORTHO05D006771 1.1e-31 139.8 85 77.6
GSVIVG01007718001 Vitis vinifera HOM05D002875 ORTHO05D003215 1.8e-31 139.0 85 77.6
Ciclev10020953m.g Citrus clementina HOM05D005549 ORTHO05D006771 4.0e-31 137.9 85 77.6
Aqoxy3G02864 Aquilegia oxysepala HOM05D005549 ORTHO05D006771 1.2e-30 136.3 85 74.1
Prupe.5G171000 Prunus persica HOM05D005549 ORTHO05D006771 1.5e-30 136.0 85 74.1
Atru.chr9.2502 Acer truncatum HOM05D005549 ORTHO05D006771 2.6e-30 135.2 85 75.3
Atru.chr9.2511 Acer truncatum HOM05D005549 ORTHO05D006771 2.6e-30 135.2 85 75.3
Gohir.D09G166900 Gossypium hirsutum HOM05D005549 ORTHO05D006771 2.6e-30 135.2 85 76.5
Gorai.006G188700 Gossypium raimondii HOM05D005549 ORTHO05D006771 2.6e-30 135.2 85 76.5
Nn4g25809 Nelumbo nucifera HOM05D005549 ORTHO05D006771 2.6e-30 135.2 85 72.9
TAR622G1114 Trochodendron aralioides HOM05D005549 ORTHO05D006771 4.5e-30 134.4 85 75.3
Dinv38568 Davidia involucrata HOM05D005549 ORTHO05D006771 7.6e-30 133.7 85 71.8
TWI14G0382 Tripterygium wilfordii HOM05D005549 ORTHO05D006771 7.6e-30 133.7 86 73.3
Gohir.A09G171200 Gossypium hirsutum HOM05D005549 ORTHO05D006771 1.7e-29 132.5 85 74.1
QL10p009538 Quercus lobata HOM05D005549 ORTHO05D006771 1.7e-29 132.5 86 76.7
Cc04_g12210 Coffea canephora HOM05D005549 ORTHO05D006771 1.1e-28 129.8 85 72.9
Eucgr.H00383 Eucalyptus grandis HOM05D005549 ORTHO05D006771 1.1e-28 129.8 86 70.9
Nitab4.5_0002265g0110 Nicotiana tabacum HOM05D005549 ORTHO05D006771 1.1e-28 129.8 85 71.8
CiPaw.11G024000 Carya illinoinensis HOM05D005549 ORTHO05D006771 1.9e-28 129.0 85 72.9
Peaxi162Scf00075g00159 Petunia axillaris HOM05D005549 ORTHO05D006771 3.2e-28 128.3 85 69.4
Hma1.2p1_0046F.1_g026660 Hydrangea macrophylla HOM05D005549 ORTHO05D006771 4.2e-28 127.9 85 68.2
Lalb_Chr04g0247841 Lupinus albus HOM05D005549 ORTHO05D006771 4.2e-28 127.9 85 68.2
Sopen05g007130 Solanum pennellii HOM05D005549 ORTHO05D006771 5.5e-28 127.5 85 68.2
ClCG06G017070 Citrullus lanatus HOM05D005549 ORTHO05D006771 7.1e-28 127.1 85 70.6
Nitab4.5_0001239g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 7.1e-28 127.1 85 70.6
PGSC0003DMG400028373 Solanum tuberosum HOM05D005549 ORTHO05D006771 1.6e-27 125.9 85 67.1
Gorai.001G151900 Gossypium raimondii HOM05D005549 ORTHO05D006771 2.1e-27 125.6 85 70.6
MD06G1171600 Malus domestica HOM05D005549 ORTHO05D006771 2.1e-27 125.6 85 69.4
vmacro16625 Vaccinium macrocarpon HOM05D005549 ORTHO05D006771 3.5e-27 124.8 85 69.4
MELO3C017092.2 Cucumis melo HOM05D005549 ORTHO05D006771 6.0e-27 124.0 85 68.2
CsaV3_1G001440 Cucumis sativus L. HOM05D005549 ORTHO05D006771 6.0e-27 124.0 85 67.1
Manes.06G106600 Manihot esculenta HOM05D005549 ORTHO05D006771 6.0e-27 124.0 79 73.4
Lj3C19G0 Lonicera japonica HOM05D005549 ORTHO05D006771 7.9e-27 123.6 80 68.8
CANSAT25G1426 Cannabis sativa HOM05D005549 ORTHO05D006771 1.0e-26 123.2 85 68.2
FvH4_5g05540 Fragaria vesca HOM05D005549 ORTHO05D006771 1.3e-26 122.9 78 74.4
FAN08G3612 Fragaria x ananassa HOM05D005549 ORTHO05D006771 1.3e-26 122.9 78 74.4
FAN13G1520 Fragaria x ananassa HOM05D005549 ORTHO05D006771 1.3e-26 122.9 78 74.4
FAN18G0652 Fragaria x ananassa HOM05D005549 ORTHO05D006771 1.3e-26 122.9 78 74.4
FAN18G1717 Fragaria x ananassa HOM05D005549 ORTHO05D006771 1.3e-26 122.9 78 74.4
PGR031G3229 Punica granatum HOM05D005549 ORTHO05D006771 1.3e-26 122.9 82 65.9
Sopen05g007150 Solanum pennellii HOM05D005549 ORTHO05D006771 2.3e-26 122.1 85 65.9
FAN04G2905 Fragaria x ananassa HOM05D005549 ORTHO05D006771 3.9e-26 121.3 78 73.1
Medtr5g096040 Medicago truncatula HOM05D005549 ORTHO05D006771 5.1e-26 120.9 85 65.9
Gohir.D07G139801 Gossypium hirsutum HOM05D005549 ORTHO05D006771 8.7e-26 120.2 85 68.2
Sabra14G0003300 Salix brachista HOM05D005549 ORTHO05D006771 8.7e-26 120.2 85 65.9
Glyma.09G077900 Glycine max HOM05D005549 ORTHO05D006771 1.5e-25 119.4 85 65.9
Glyma.15G218700 Glycine max HOM05D005549 ORTHO05D006771 1.5e-25 119.4 85 65.9
Potri.014G000900 Populus trichocarpa HOM05D005549 ORTHO05D006771 1.5e-25 119.4 85 65.9
Rhsim12G0166100 Rhododendron simsii HOM05D005549 ORTHO05D006771 1.9e-25 119.0 85 65.9
Sed0023293 Sechium edule HOM05D005549 ORTHO05D006771 2.5e-25 118.6 85 64.7
ECA232G3151 Erigeron canadensis HOM05D005549 ORTHO05D006771 7.4e-25 117.1 86 67.4
Migut.K00304 Erythranthe guttata HOM05D005549 ORTHO05D006771 7.4e-25 117.1 88 67.0
VMungo1127G1558 Vigna mungo HOM05D005549 ORTHO05D006771 7.4e-25 117.1 85 65.9
Oeu024700.1 Olea europaea HOM05D005549 ORTHO05D006771 9.6e-25 116.7 75 70.7
Lsat_1_v5_gn_4_75780 Lactuca sativa HOM05D005549 ORTHO05D006771 1.3e-24 116.3 77 70.1
Sc12g0005230 Simmondsia chinensis HOM05D005549 ORTHO05D006771 1.3e-24 116.3 85 64.7
arahy.Tifrunner.gnm1.ann1.386HL4 Arachis hypogaea HOM05D005549 ORTHO05D006771 1.6e-24 115.9 90 65.6
arahy.Tifrunner.gnm1.ann1.7VTX70 Arachis hypogaea HOM05D005549 ORTHO05D006771 1.6e-24 115.9 90 65.6
arahy.Tifrunner.gnm1.ann1.BH3JLW Arachis hypogaea HOM05D005549 ORTHO05D006771 1.6e-24 115.9 90 65.6
Psat2g007040 Pisum sativum HOM05D005549 ORTHO05D006771 2.1e-24 115.5 85 63.5
RcHm_v2.0_Chr7g0193241 Rosa chinensis HOM05D005549 ORTHO05D006771 3.7e-24 114.8 85 65.9
AL8G40040 Arabidopsis lyrata HOM05D005549 ORTHO05D006771 6.2e-24 114.0 87 62.1
SGA_v2.0_scaffold293G47425 Striga asiatica HOM05D005549 ORTHO05D006771 6.2e-24 114.0 76 69.7
Hund09451 Selenicereus undatus HOM05D005549 ORTHO05D006771 8.2e-24 113.6 85 63.5
TPR.G8611 Trifolium pratense HOM05D005549 ORTHO05D006771 8.2e-24 113.6 85 61.2
MBI16_g05472_MAGBIO Magnolia biondii HOM05D005549 ORTHO05D006771 1.8e-23 112.5 85 63.5
AT5G63010 Arabidopsis thaliana HOM05D005549 ORTHO05D006771 3.1e-23 111.7 87 63.2
Carub.0008s2372 Capsella rubella HOM05D005549 ORTHO05D006771 3.1e-23 111.7 96 57.3
CARHR276820 Cardamine hirsuta HOM05D005549 ORTHO05D006771 3.1e-23 111.7 81 61.7
Thhalv10004522m.g Eutrema salsugineum HOM05D005549 ORTHO05D006771 4.0e-23 111.3 87 62.1
Ca_06401_v3 Cicer arietinum L. HOM05D005549 ORTHO05D006771 5.3e-23 110.9 85 58.8
PSO478G4565 Papaver somniferum HOM05D005549 ORTHO05D006771 6.9e-23 110.5 80 60.0
BcaB02g09715 Brassica carinata HOM05D005549 ORTHO05D006771 9.0e-23 110.2 82 64.6
DCAR_016476 Daucus carota HOM05D005549 ORTHO05D006771 9.0e-23 110.2 89 59.6
Eucgr.C01244 Eucalyptus grandis HOM05D005549 ORTHO05D006771 1.2e-22 109.8 86 64.0
BcaC01g02548 Brassica carinata HOM05D005549 ORTHO05D006771 1.5e-22 109.4 81 61.7
C03p63600 Brassica napus HOM05D005549 ORTHO05D006771 1.5e-22 109.4 81 61.7
BolC3t18618H Brassica oleracea HOM05D005549 ORTHO05D006771 1.5e-22 109.4 81 61.7
Phvul.011G182000 Phaseolus vulgaris HOM05D005549 ORTHO05D006771 1.5e-22 109.4 85 63.5
Phvul.011G182066 Phaseolus vulgaris HOM05D005549 ORTHO05D006771 1.5e-22 109.4 85 63.5
A06p29790 Brassica napus HOM05D005549 ORTHO05D006771 2.0e-22 109.0 81 63.0
BraA06t25926Z Brassica rapa HOM05D005549 ORTHO05D006771 2.6e-22 108.6 81 63.0
MSTRG.26261 Avicennia marina HOM05D005549 ORTHO05D006771 3.4e-22 108.2 75 65.3
Peaxi162Scf00141g00210 Petunia axillaris HOM05D005549 ORTHO05D006771 5.8e-22 107.5 85 61.2
Sp2g26140 Schrenkiella parvula HOM05D005549 ORTHO05D006771 7.6e-22 107.1 83 61.4
Aa31LG11G650 Aethionema arabicum HOM05D005549 ORTHO05D006771 1.3e-21 106.3 79 62.0
MD14G1177100 Malus domestica HOM05D005549 ORTHO05D006771 1.3e-21 106.3 78 65.4
Ah.02g110600 Amaranthus hybridus HOM05D005549 ORTHO05D006771 2.2e-21 105.5 85 56.5
EL10Ac5g10725 Beta vulgaris HOM05D005549 ORTHO05D006771 2.2e-21 105.5 85 57.6
AUR62008189 Chenopodium quinoa HOM05D005549 ORTHO05D006771 3.8e-21 104.8 85 56.5
ATR0807G036 Amborella trichopoda HOM05D005549 ORTHO05D006771 8.4e-21 103.6 85 57.6
LjContig00081g0017630 Lotus japonicus HOM05D005549 ORTHO05D006771 5.5e-20 100.9 80 60.0
SHI17110 Sapria himalayana HOM05D005549 ORTHO05D006771 1.6e-19 99.4 85 58.8
unitig_37.g12682 Utricularia gibba HOM05D005549 ORTHO05D006771 6.0e-19 97.4 75 61.3
CDE02G3271 Ceratophyllum demersum HOM05D005549 ORTHO05D006771 6.7e-18 94.0 85 54.1
Os04g0507900 Oryza sativa ssp. japonica HOM05D005549 ORTHO05D006771 9.7e-17 90.1 83 57.8
HPP92_021890 Vanilla planifolia HOM05D005549 ORTHO05D006771 3.7e-16 88.2 82 56.1
Zm00001eb426250 Zea mays HOM05D005549 ORTHO05D006771 1.2e-14 83.2 79 58.2
Pp3c9_15370 Physcomitrium patens HOM05D005549 ORTHO05D006771 7.7e-14 80.5 78 47.4
THA.LOC104818503 Tarenaya hassleriana HOM05D005549 ORTHO05D006771 1.9e-12 75.9 61 60.7
Mapoly0027s0008 Marchantia polymorpha HOM05D005549 ORTHO05D006771 2.5e-12 75.5 85 43.5
Lj5C126T17 Lonicera japonica HOM05D005549 ORTHO05D006771 6.1e-11 70.9 53 64.2
Nitab4.5_0003499g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 1.1e-09 66.6 85 43.5
SMO367G1205 Selaginella moellendorffii HOM05D005549 ORTHO05D006771 2.5e-09 65.5 71 52.1
AagrBONN_evm.TU.Sc2ySwM_228.3282 Anthoceros agrestis HOM05D005549 ORTHO05D006771 4.3e-09 64.7 82 43.9


User provided reference genes

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