Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c31034 Carica papaya HOM05D000146 ORTHO05D012402 8.3e-20 99.4 49 100.0
Cpa.g.c29663 Carica papaya HOM05D000146 ORTHO05D012402 5.2e-14 80.1 49 83.7
Cpa.g.c25033 Carica papaya HOM05D000146 ORTHO05D012402 1.5e-13 78.6 38 100.0
Cpa.g.sc2693.1 Carica papaya HOM05D000146 ORTHO05D012402 2.9e-12 74.3 38 94.7
QL04p042903 Quercus lobata HOM05D000146 ORTHO05D000178 1.1e-11 72.4 49 71.4
Prupe.2G083600 Prunus persica HOM05D000146 ORTHO05D000178 3.2e-11 70.9 49 71.4
Rhsim03G0103200 Rhododendron simsii HOM05D000146 ORTHO05D000178 9.2e-11 69.3 49 67.3
Atru.chr12.981 Acer truncatum HOM05D000146 ORTHO05D000178 1.6e-10 68.6 48 68.8
CSS0016453 Camellia sinensis var. sinensis HOM05D000146 ORTHO05D000178 1.6e-10 68.6 49 67.3
COL.COLO4_04304 Corchorus olitorius HOM05D000146 ORTHO05D000178 1.6e-10 68.6 49 69.4
Nitab4.5_0010832g0010 Nicotiana tabacum HOM05D000146 ORTHO05D000178 1.6e-10 68.6 49 69.4
Rhsim03G0104600 Rhododendron simsii HOM05D000146 ORTHO05D000178 1.6e-10 68.6 49 65.3
CANSAT56G3995 Cannabis sativa HOM05D000146 ORTHO05D000178 2.0e-10 68.2 48 68.8
Nn2g14067 Nelumbo nucifera HOM05D000146 ORTHO05D000178 2.0e-10 68.2 48 66.7
Dinv06785 Davidia involucrata HOM05D000146 ORTHO05D000178 2.7e-10 67.8 49 65.3
Ciclev10033801m.g Citrus clementina HOM05D000146 ORTHO05D000178 3.5e-10 67.4 49 67.3
PSO541G5728 Papaver somniferum HOM05D000146 ORTHO05D000178 3.5e-10 67.4 48 66.7
PSO675G3207 Papaver somniferum HOM05D000146 ORTHO05D000178 3.5e-10 67.4 48 66.7
Rhsim03G0102600 Rhododendron simsii HOM05D000146 ORTHO05D000178 3.5e-10 67.4 48 66.7
Gohir.A05G395400 Gossypium hirsutum HOM05D000146 ORTHO05D000178 4.6e-10 67.0 49 67.3
Sopen11g003150 Solanum pennellii HOM05D000146 ORTHO05D000178 4.6e-10 67.0 49 67.3
PGSC0003DMG400019493 Solanum tuberosum HOM05D000146 ORTHO05D000178 4.6e-10 67.0 49 67.3
Actinidia18589 Actinidia chinensis HOM05D000146 ORTHO05D000178 6.0e-10 66.6 49 65.3
CSS0001782 Camellia sinensis var. sinensis HOM05D000146 ORTHO05D000178 6.0e-10 66.6 49 65.3
Gohir.D04G019600 Gossypium hirsutum HOM05D000146 ORTHO05D000178 6.0e-10 66.6 49 65.3
Nitab4.5_0000962g0110 Nicotiana tabacum HOM05D000146 ORTHO05D000178 6.0e-10 66.6 49 67.3
CAN.G534.3 Capsicum annuum HOM05D000146 ORTHO05D000178 7.8e-10 66.2 49 67.3
Solyc11g067080.3 Solanum lycopersicum HOM05D000146 ORTHO05D000178 7.8e-10 66.2 48 66.7
Sopen11g026790 Solanum pennellii HOM05D000146 ORTHO05D000178 7.8e-10 66.2 48 66.7
PGSC0003DMG400026531 Solanum tuberosum HOM05D000146 ORTHO05D000178 7.8e-10 66.2 48 66.7
Peaxi162Scf00244g01420 Petunia axillaris HOM05D000146 ORTHO05D000178 1.0e-09 65.9 49 67.3
MD07G1066400 Malus domestica HOM05D000146 ORTHO05D000178 1.3e-09 65.5 49 65.3
Potri.008G024000 Populus trichocarpa HOM05D000146 ORTHO05D000178 1.3e-09 65.5 49 65.3
Sabra10G0183300 Salix brachista HOM05D000146 ORTHO05D000178 1.3e-09 65.5 49 63.3
Gorai.012G023400 Gossypium raimondii HOM05D000146 ORTHO05D000178 1.7e-09 65.1 49 63.3
HanXRQChr07g0197801 Helianthus annuus HOM05D000146 ORTHO05D000178 1.7e-09 65.1 49 63.3
Solyc11g007250.2 Solanum lycopersicum HOM05D000146 ORTHO05D000178 1.7e-09 65.1 49 65.3
Thecc.10G103200 Theobroma cacao HOM05D000146 ORTHO05D000178 1.7e-09 65.1 49 63.3
Haze_02586 Corylus avellana HOM05D000146 ORTHO05D000178 3.0e-09 64.3 49 63.3
Migut.D02343 Erythranthe guttata HOM05D000146 ORTHO05D000178 3.0e-09 64.3 48 66.7
Migut.D02362 Erythranthe guttata HOM05D000146 ORTHO05D000178 3.0e-09 64.3 48 66.7
PGR044G2331 Punica granatum HOM05D000146 ORTHO05D000178 3.0e-09 64.3 49 63.3
CAN.G644.9 Capsicum annuum HOM05D000146 ORTHO05D000178 3.9e-09 63.9 48 64.6
Manes.10G057600 Manihot esculenta HOM05D000146 ORTHO05D000178 3.9e-09 63.9 49 65.3
Potri.010G236200 Populus trichocarpa HOM05D000146 ORTHO05D000178 3.9e-09 63.9 49 65.3
GSVIVG01031370001 Vitis vinifera HOM05D000146 ORTHO05D000178 3.9e-09 63.9 48 64.6
Cfa011248 Carpinus fangiana HOM05D000146 ORTHO05D000178 5.0e-09 63.5 49 63.3
Haze_02581 Corylus avellana HOM05D000146 ORTHO05D000178 5.0e-09 63.5 49 63.3
HanXRQChr14g0451671 Helianthus annuus HOM05D000146 ORTHO05D000178 5.0e-09 63.5 49 59.2
Ca_01670_v3 Cicer arietinum L. HOM05D000146 ORTHO05D000178 6.6e-09 63.2 48 64.6
MSTRG.17717 Avicennia marina HOM05D000146 ORTHO05D000178 8.6e-09 62.8 48 62.5
AUR62009799 Chenopodium quinoa HOM05D000146 ORTHO05D000178 8.6e-09 62.8 48 62.5
AUR62039247 Chenopodium quinoa HOM05D000146 ORTHO05D000178 8.6e-09 62.8 48 62.5
Dinv42578 Davidia involucrata HOM05D000146 ORTHO05D000178 8.6e-09 62.8 48 62.5
Lalb_Chr24g0395211 Lupinus albus HOM05D000146 ORTHO05D000178 8.6e-09 62.8 48 62.5
CiPaw.13G037900 Carya illinoinensis HOM05D000146 ORTHO05D000178 1.1e-08 62.4 49 63.3
CiPaw.13G139300 Carya illinoinensis HOM05D000146 ORTHO05D000178 1.1e-08 62.4 48 60.4
Eucgr.J01001 Eucalyptus grandis HOM05D000146 ORTHO05D000178 1.1e-08 62.4 48 64.6
HanXRQChr13g0396791 Helianthus annuus HOM05D000146 ORTHO05D000178 1.1e-08 62.4 48 62.5
Sabra09G0113300 Salix brachista HOM05D000146 ORTHO05D000178 1.1e-08 62.4 48 62.5
Sabra09G0115700 Salix brachista HOM05D000146 ORTHO05D000178 1.1e-08 62.4 48 62.5
Ah.08g216000 Amaranthus hybridus HOM05D000146 ORTHO05D000178 1.5e-08 62.0 48 62.5
MBI01_g21758_MAGBIO Magnolia biondii HOM05D000146 ORTHO05D000178 1.5e-08 62.0 48 64.6
GSVIVG01034755001 Vitis vinifera HOM05D000146 ORTHO05D000178 1.5e-08 62.0 49 61.2
EL10Ac7g15787 Beta vulgaris HOM05D000146 ORTHO05D000178 1.9e-08 61.6 48 62.5
Cc02_g09910 Coffea canephora HOM05D000146 ORTHO05D000178 1.9e-08 61.6 49 59.2
Gorai.001G120600 Gossypium raimondii HOM05D000146 ORTHO05D000178 1.9e-08 61.6 48 62.5
SalBow3G4142 Salvia bowleyana HOM05D000146 ORTHO05D000178 1.9e-08 61.6 48 60.4
Gohir.D07G112200 Gossypium hirsutum HOM05D000146 ORTHO05D000178 2.5e-08 61.2 48 60.4
TWI63G1541 Tripterygium wilfordii HOM05D000146 ORTHO05D000178 2.5e-08 61.2 49 63.3
COL.COLO4_19944 Corchorus olitorius HOM05D000146 ORTHO05D000178 3.3e-08 60.8 48 62.5
Nn6g35000 Nelumbo nucifera HOM05D000146 ORTHO05D000178 3.3e-08 60.8 48 60.4
SGA_v2.0_scaffold147G36356 Striga asiatica HOM05D000146 ORTHO05D000178 3.3e-08 60.8 48 58.3
Glyma.12G182600 Glycine max HOM05D000146 ORTHO05D000178 4.3e-08 60.5 48 60.4
Rhsim13G0107500 Rhododendron simsii HOM05D000146 ORTHO05D000178 4.3e-08 60.5 48 62.5
Thecc.09G288500 Theobroma cacao HOM05D000146 ORTHO05D000178 4.3e-08 60.5 48 60.4
Migut.F00898 Erythranthe guttata HOM05D000146 ORTHO05D000178 5.6e-08 60.1 48 60.4
Glyma.13G318400 Glycine max HOM05D000146 ORTHO05D000178 5.6e-08 60.1 48 60.4
Gohir.A07G108400 Gossypium hirsutum HOM05D000146 ORTHO05D000178 5.6e-08 60.1 48 60.4
Lj1A247G53 Lonicera japonica HOM05D000146 ORTHO05D000178 5.6e-08 60.1 48 60.4
Lj2C30T2 Lonicera japonica HOM05D000146 ORTHO05D000178 5.6e-08 60.1 49 61.2
TWI75G1658 Tripterygium wilfordii HOM05D000146 ORTHO05D000178 5.6e-08 60.1 48 60.4
TWI79G0421 Tripterygium wilfordii HOM05D000146 ORTHO05D000178 5.6e-08 60.1 48 60.4
Atru.chr3.3342 Acer truncatum HOM05D000146 ORTHO05D000178 7.3e-08 59.7 48 60.4
CSS0039206 Camellia sinensis var. sinensis HOM05D000146 ORTHO05D000178 7.3e-08 59.7 48 60.4
Potri.004G186200 Populus trichocarpa HOM05D000146 ORTHO05D000178 7.3e-08 59.7 48 60.4
TPR.G23373 Trifolium pratense HOM05D000146 ORTHO05D000178 7.3e-08 59.7 48 60.4
Cc01_g09560 Coffea canephora HOM05D000146 ORTHO05D000178 9.5e-08 59.3 48 60.4
Duzib170G0700 Durio zibethinus HOM05D000146 ORTHO05D000178 9.5e-08 59.3 48 58.3
Eucgr.J00460 Eucalyptus grandis HOM05D000146 ORTHO05D000178 9.5e-08 59.3 48 58.3
Glyma.20G187200 Glycine max HOM05D000146 ORTHO05D000178 9.5e-08 59.3 49 57.1
Lj3g0026827 Lotus japonicus HOM05D000146 ORTHO05D000178 9.5e-08 59.3 48 60.4
Manes.04G006600 Manihot esculenta HOM05D000146 ORTHO05D000178 9.5e-08 59.3 48 58.3
Psat5g256120 Pisum sativum HOM05D000146 ORTHO05D000178 9.5e-08 59.3 48 60.4
Sp5g16590 Schrenkiella parvula HOM05D000146 ORTHO05D000178 9.5e-08 59.3 48 54.2
Hund20865 Selenicereus undatus HOM05D000146 ORTHO05D000178 9.5e-08 59.3 49 59.2
Aa31LG4G14350 Aethionema arabicum HOM05D000146 ORTHO05D000178 1.2e-07 58.9 48 54.2
AL5G22750 Arabidopsis lyrata HOM05D000146 ORTHO05D000178 1.2e-07 58.9 48 54.2
AT3G44610 Arabidopsis thaliana HOM05D000146 ORTHO05D000178 1.2e-07 58.9 48 54.2
Carub.0005s1025 Capsella rubella HOM05D000146 ORTHO05D000178 1.2e-07 58.9 48 54.2
Carub.0015s0018 Capsella rubella HOM05D000146 ORTHO05D000178 1.2e-07 58.9 48 54.2
CARHR151540 Cardamine hirsuta HOM05D000146 ORTHO05D000178 1.2e-07 58.9 48 54.2
Duzib150G1407 Durio zibethinus HOM05D000146 ORTHO05D000178 1.2e-07 58.9 48 60.4
Duzib168G0408 Durio zibethinus HOM05D000146 ORTHO05D000178 1.2e-07 58.9 48 60.4
Lsat_1_v5_gn_2_95760 Lactuca sativa HOM05D000146 ORTHO05D000178 1.2e-07 58.9 48 58.3
Lalb_Chr14g0374151 Lupinus albus HOM05D000146 ORTHO05D000178 1.2e-07 58.9 48 60.4
Os12g0149700 Oryza sativa ssp. japonica HOM05D000146 ORTHO05D000178 1.2e-07 58.9 48 56.2
TAR633G0305 Trochodendron aralioides HOM05D000146 ORTHO05D000178 1.2e-07 58.9 48 58.3
Dinv29442 Davidia involucrata HOM05D000146 ORTHO05D000178 1.6e-07 58.5 48 60.4
ECA233G5151 Erigeron canadensis HOM05D000146 ORTHO05D000178 1.6e-07 58.5 49 55.1
Glyma.11G187600 Glycine max HOM05D000146 ORTHO05D000178 1.6e-07 58.5 48 58.3
Hma1.2p1_0305F.1_g119410 Hydrangea macrophylla HOM05D000146 ORTHO05D000178 1.6e-07 58.5 48 60.4
Lj1A223G54 Lonicera japonica HOM05D000146 ORTHO05D000178 1.6e-07 58.5 48 58.3
Potri.009G146500 Populus trichocarpa HOM05D000146 ORTHO05D000178 1.6e-07 58.5 48 56.2
DCAR_006151 Daucus carota HOM05D000146 ORTHO05D000178 2.1e-07 58.2 48 58.3
Gohir.D09G094200 Gossypium hirsutum HOM05D000146 ORTHO05D000178 2.1e-07 58.2 48 58.3
Gorai.006G110800 Gossypium raimondii HOM05D000146 ORTHO05D000178 2.1e-07 58.2 48 58.3
Medtr2g085065 Medicago truncatula HOM05D000146 ORTHO05D000178 2.1e-07 58.2 48 58.3
Sabra04G0125400 Salix brachista HOM05D000146 ORTHO05D000178 2.1e-07 58.2 48 58.3
vmacro03294 Vaccinium macrocarpon HOM05D000146 ORTHO05D000178 2.1e-07 58.2 48 58.3
Actinidia24193 Actinidia chinensis HOM05D000146 ORTHO05D000178 2.8e-07 57.8 48 58.3
Thhalv10002527m.g Eutrema salsugineum HOM05D000146 ORTHO05D000178 2.8e-07 57.8 48 52.1
Os11g0150700 Oryza sativa ssp. japonica HOM05D000146 ORTHO05D000178 2.8e-07 57.8 48 56.2
Phvul.011G090900 Phaseolus vulgaris HOM05D000146 ORTHO05D000178 2.8e-07 57.8 49 57.1
VMungo1127G1786 Vigna mungo HOM05D000146 ORTHO05D000178 2.8e-07 57.8 49 57.1
Cfa010065 Carpinus fangiana HOM05D000146 ORTHO05D000178 3.6e-07 57.4 48 56.2
ECA238G0940 Erigeron canadensis HOM05D000146 ORTHO05D000178 3.6e-07 57.4 48 56.2
PGR119G1901 Punica granatum HOM05D000146 ORTHO05D000178 3.6e-07 57.4 48 58.3
Sc12g0004300 Simmondsia chinensis HOM05D000146 ORTHO05D000178 3.6e-07 57.4 48 58.3
Ciclev10028453m.g Citrus clementina HOM05D000146 ORTHO05D000178 4.7e-07 57.0 48 58.3
Lsat_1_v5_gn_6_39540 Lactuca sativa HOM05D000146 ORTHO05D000178 4.7e-07 57.0 48 54.2
BcaB01g01151 Brassica carinata HOM05D000146 ORTHO05D000178 6.2e-07 56.6 48 52.1
BcaC01g02061 Brassica carinata HOM05D000146 ORTHO05D000178 6.2e-07 56.6 48 52.1
C03p69040 Brassica napus HOM05D000146 ORTHO05D000178 6.2e-07 56.6 48 52.1
BolC3t19159H Brassica oleracea HOM05D000146 ORTHO05D000178 6.2e-07 56.6 48 52.1
BraA06t25269Z Brassica rapa HOM05D000146 ORTHO05D000178 6.2e-07 56.6 48 52.1
MELO3C021437.2 Cucumis melo HOM05D000146 ORTHO05D000178 6.2e-07 56.6 48 56.2
QL01p013313 Quercus lobata HOM05D000146 ORTHO05D000178 6.2e-07 56.6 48 56.2
Sed0004746 Sechium edule HOM05D000146 ORTHO05D000178 6.2e-07 56.6 48 56.2
vmacro07233 Vaccinium macrocarpon HOM05D000146 ORTHO05D000178 6.2e-07 56.6 45 57.8
arahy.Tifrunner.gnm1.ann1.0Z8YFF Arachis hypogaea HOM05D000146 ORTHO05D000178 8.1e-07 56.2 48 58.3
arahy.Tifrunner.gnm1.ann1.BDUB1I Arachis hypogaea HOM05D000146 ORTHO05D000178 8.1e-07 56.2 48 58.3
A06p21810 Brassica napus HOM05D000146 ORTHO05D000178 8.1e-07 56.2 48 52.1
ClCG02G022030 Citrullus lanatus HOM05D000146 ORTHO05D000178 8.1e-07 56.2 48 56.2
CsaV3_6G014860 Cucumis sativus L. HOM05D000146 ORTHO05D000178 8.1e-07 56.2 48 56.2
ECA238G0988 Erigeron canadensis HOM05D000146 ORTHO05D000178 8.1e-07 56.2 49 53.1
Phvul.007G103900 Phaseolus vulgaris HOM05D000146 ORTHO05D000178 8.1e-07 56.2 49 55.1
HPP92_005464 Vanilla planifolia HOM05D000146 ORTHO05D000178 8.1e-07 56.2 48 56.2
VMungo0720G1726 Vigna mungo HOM05D000146 ORTHO05D000178 8.1e-07 56.2 49 55.1
MSTRG.18741 Avicennia marina HOM05D000146 ORTHO05D000178 1.1e-06 55.8 48 58.3
HanXRQChr04g0094661 Helianthus annuus HOM05D000146 ORTHO05D000178 1.1e-06 55.8 48 58.3
Cpa.g.c31115 Carica papaya HOM05D000146 ORTHO05D012402 1.4e-06 55.5 37 75.7
MD03G1137900 Malus domestica HOM05D000146 ORTHO05D000178 1.4e-06 55.5 48 54.2
RcHm_v2.0_Chr5g0043661 Rosa chinensis HOM05D000146 ORTHO05D000178 1.4e-06 55.5 48 56.2
ATR0757G032 Amborella trichopoda HOM05D000146 ORTHO05D000178 1.8e-06 55.1 49 55.1
Glyma.12G086900 Glycine max HOM05D000146 ORTHO05D000178 1.8e-06 55.1 48 54.2
MD11G1160000 Malus domestica HOM05D000146 ORTHO05D000178 1.8e-06 55.1 48 54.2
unitig_0.g1484 Utricularia gibba HOM05D000146 ORTHO05D000178 1.8e-06 55.1 48 56.2
Cpa.g.sc31.92 Carica papaya HOM05D000146 ORTHO05D000178 2.3e-06 54.7 48 52.1
CDE06G0454 Ceratophyllum demersum HOM05D000146 ORTHO05D000178 2.3e-06 54.7 48 54.2
CDE08G0140 Ceratophyllum demersum HOM05D000146 ORTHO05D000178 2.3e-06 54.7 48 54.2
DCAR_006350 Daucus carota HOM05D000146 ORTHO05D000178 2.3e-06 54.7 48 54.2
Gohir.A09G094500 Gossypium hirsutum HOM05D000146 ORTHO05D000178 2.3e-06 54.7 48 54.2
Oeu005341.1 Olea europaea HOM05D000146 ORTHO05D000178 2.3e-06 54.7 48 54.2
Prupe.6G122900 Prunus persica HOM05D000146 ORTHO05D000178 2.3e-06 54.7 48 54.2
FvH4_3g24290 Fragaria vesca HOM05D000146 ORTHO05D000178 3.1e-06 54.3 48 54.2
FAN11G2506 Fragaria x ananassa HOM05D000146 ORTHO05D000178 3.1e-06 54.3 48 54.2
FAN21G1298 Fragaria x ananassa HOM05D000146 ORTHO05D000178 3.1e-06 54.3 48 54.2
SHI06302 Sapria himalayana HOM05D000146 ORTHO05D000178 3.1e-06 54.3 48 54.2
THA.LOC104810908 Tarenaya hassleriana HOM05D000146 ORTHO05D000178 3.1e-06 54.3 48 52.1
FAN16G2503 Fragaria x ananassa HOM05D000146 ORTHO05D000178 4.0e-06 53.9 48 54.2
HanXRQChr07g0194211 Helianthus annuus HOM05D000146 ORTHO05D000178 4.0e-06 53.9 49 51.0
Lsat_1_v5_gn_2_105060 Lactuca sativa HOM05D000146 ORTHO05D000178 4.0e-06 53.9 48 54.2
Oeu058275.2 Olea europaea HOM05D000146 ORTHO05D000178 6.8e-06 53.1 48 52.1


User provided reference genes

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