Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c30633.1 Carica papaya HOM05D005712 ORTHO05D120172 1.1e-46 189.5 92 100.0
Cpa.g.sc26.149 Carica papaya HOM05D005712 ORTHO05D007865 4.5e-19 97.8 140 46.4
Thecc.08G064200 Theobroma cacao HOM05D005712 ORTHO05D007865 6.6e-10 67.4 56 66.1
FAN13G2028 Fragaria x ananassa HOM05D005712 ORTHO05D007865 8.6e-10 67.0 57 61.4
Prupe.5G006400 Prunus persica HOM05D005712 ORTHO05D007865 8.6e-10 67.0 56 62.5
RcHm_v2.0_Chr7g0216471 Rosa chinensis HOM05D005712 ORTHO05D007865 8.6e-10 67.0 57 61.4
FvH4_5g25940 Fragaria vesca HOM05D005712 ORTHO05D007865 1.1e-09 66.6 57 61.4
FAN18G0352 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.1e-09 66.6 57 61.4
RcHm_v2.0_Chr4g0410601 Rosa chinensis HOM05D005712 ORTHO05D007865 1.1e-09 66.6 57 61.4
Lj4C5T14 Lonicera japonica HOM05D005712 ORTHO05D007865 1.5e-09 66.2 61 57.4
COL.COLO4_07687 Corchorus olitorius HOM05D005712 ORTHO05D007865 1.9e-09 65.9 56 62.5
FAN04G3045 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.9e-09 65.9 61 59.0
FAN08G0897 Fragaria x ananassa HOM05D005712 ORTHO05D007865 7.3e-09 63.9 57 59.6
Gohir.A05G177700 Gossypium hirsutum HOM05D005712 ORTHO05D007865 1.6e-08 62.8 56 57.1
Duzib116G0237 Durio zibethinus HOM05D005712 ORTHO05D007865 2.1e-08 62.4 50 66.0
GSVIVG01013413001 Vitis vinifera HOM05D005712 ORTHO05D007865 2.1e-08 62.4 61 59.0
Potri.005G255300 Populus trichocarpa HOM05D005712 ORTHO05D007865 2.8e-08 62.0 61 60.7
MD06G1005200 Malus domestica HOM05D005712 ORTHO05D007865 3.6e-08 61.6 56 58.9
TAR381G1666 Trochodendron aralioides HOM05D005712 ORTHO05D007865 6.1e-08 60.8 56 55.4
Gohir.D05G181100 Gossypium hirsutum HOM05D005712 ORTHO05D007865 1.0e-07 60.1 56 57.1
Gorai.009G186100 Gossypium raimondii HOM05D005712 ORTHO05D007865 1.0e-07 60.1 56 57.1
Atru.chr13.78 Acer truncatum HOM05D005712 ORTHO05D007865 1.4e-07 59.7 56 58.9
CSS0017080 Camellia sinensis var. sinensis HOM05D005712 ORTHO05D007865 1.4e-07 59.7 56 57.1
Dinv31977 Davidia involucrata HOM05D005712 ORTHO05D007865 1.4e-07 59.7 55 58.2
CiPaw.07G134700 Carya illinoinensis HOM05D005712 ORTHO05D007865 2.3e-07 58.9 56 57.1
Potri.002G006300 Populus trichocarpa HOM05D005712 ORTHO05D007865 4.0e-07 58.2 61 55.7
TAR625G0170 Trochodendron aralioides HOM05D005712 ORTHO05D007865 4.0e-07 58.2 56 53.6
Actinidia17068 Actinidia chinensis HOM05D005712 ORTHO05D007865 5.2e-07 57.8 56 51.8
Haze_22847 Corylus avellana HOM05D005712 ORTHO05D007865 5.2e-07 57.8 61 57.4
Manes.05G126100 Manihot esculenta HOM05D005712 ORTHO05D007865 6.8e-07 57.4 55 54.5
QL02p015343 Quercus lobata HOM05D005712 ORTHO05D007865 6.8e-07 57.4 56 57.1
Sabra05G0197900 Salix brachista HOM05D005712 ORTHO05D007865 8.9e-07 57.0 56 57.1
Actinidia15518 Actinidia chinensis HOM05D005712 ORTHO05D007865 1.2e-06 56.6 56 51.8
Aqoxy6G01560 Aquilegia oxysepala HOM05D005712 ORTHO05D007865 1.2e-06 56.6 56 46.4
Cfa014126 Carpinus fangiana HOM05D005712 ORTHO05D007865 1.5e-06 56.2 56 57.1
Nn5g31025 Nelumbo nucifera HOM05D005712 ORTHO05D007865 2.0e-06 55.8 56 53.6
ClCG11G018940 Citrullus lanatus HOM05D005712 ORTHO05D007865 2.6e-06 55.5 58 48.3
MSTRG.22087 Avicennia marina HOM05D005712 ORTHO05D007865 4.4e-06 54.7 51 58.8
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 4.4e-06 54.7 56 51.8
Glyma.06G015100 Glycine max HOM05D005712 ORTHO05D007865 7.5e-06 53.9 56 50.0


User provided reference genes

Program Settings