Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c30412.3 Carica papaya HOM05D006728 ORTHO05D007911 1.2e-269 932.6 481 100.0
Thecc.03G072600 Theobroma cacao HOM05D006728 ORTHO05D007911 4.2e-116 422.5 474 52.5
Gohir.D05G252600 Gossypium hirsutum HOM05D006728 ORTHO05D007911 1.8e-114 417.2 483 51.6
CiPaw.03G020000 Carya illinoinensis HOM05D006728 ORTHO05D007911 5.1e-114 415.6 487 50.3
Potri.004G133900 Populus trichocarpa HOM05D006728 ORTHO05D007911 1.1e-113 414.5 487 49.3
Gorai.009G264600 Gossypium raimondii HOM05D006728 ORTHO05D007911 5.7e-113 412.1 485 51.3
Gohir.A05G251200 Gossypium hirsutum HOM05D006728 ORTHO05D007911 3.1e-111 406.4 483 50.7
THA.LOC104799928 Tarenaya hassleriana HOM05D006728 ORTHO05D007911 4.1e-111 406.0 482 48.1
Sabra04G0084300 Salix brachista HOM05D006728 ORTHO05D007911 1.5e-110 404.1 483 49.7
COL.COLO4_24796 Corchorus olitorius HOM05D006728 ORTHO05D007911 1.9e-108 397.1 469 50.5
Dinv41739 Davidia involucrata HOM05D006728 ORTHO05D007911 1.1e-105 387.9 488 48.2
QL09p005234 Quercus lobata HOM05D006728 ORTHO05D007911 1.8e-103 380.6 478 48.3
MD15G1410500 Malus domestica HOM05D006728 ORTHO05D007911 3.5e-102 376.3 493 47.3
Sp7g25450 Schrenkiella parvula HOM05D006728 ORTHO05D007911 5.5e-100 369.0 481 46.8
CARHR235190 Cardamine hirsuta HOM05D006728 ORTHO05D007911 2.7e-99 366.7 480 46.5
Atru.chr13.2383 Acer truncatum HOM05D006728 ORTHO05D007911 6.1e-99 365.5 471 49.0
Actinidia23017 Actinidia chinensis HOM05D006728 ORTHO05D007911 1.8e-98 364.0 489 46.8
Prupe.1G552000 Prunus persica HOM05D006728 ORTHO05D007911 1.8e-98 364.0 484 47.1
AT4G27510 Arabidopsis thaliana HOM05D006728 ORTHO05D007911 1.1e-97 361.3 480 46.7
CSS0015483 Camellia sinensis var. sinensis HOM05D006728 ORTHO05D007911 1.1e-97 361.3 450 48.2
Manes.01G125500 Manihot esculenta HOM05D006728 ORTHO05D007911 2.6e-97 360.1 476 48.1
GSVIVG01012775001 Vitis vinifera HOM05D006728 ORTHO05D007911 1.1e-95 354.8 493 43.2
Ciclev10004396m.g Citrus clementina HOM05D006728 ORTHO05D007911 9.1e-95 351.7 477 46.8
TWI23G0528 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 1.2e-94 351.3 483 45.3
vmacro12473 Vaccinium macrocarpon HOM05D006728 ORTHO05D007911 1.2e-94 351.3 488 46.1
TAR381G1619 Trochodendron aralioides HOM05D006728 ORTHO05D007911 4.5e-94 349.4 490 45.7
Rhsim10G0109300 Rhododendron simsii HOM05D006728 ORTHO05D007911 1.3e-93 347.8 489 46.0
Hma1.2p1_0705F.1_g206940 Hydrangea macrophylla HOM05D006728 ORTHO05D007911 3.8e-93 346.3 487 46.2
TWI59G0071 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 3.8e-93 346.3 484 44.2
Aa31LG5G9990 Aethionema arabicum HOM05D006728 ORTHO05D007911 6.5e-93 345.5 524 42.4
Thhalv10024534m.g Eutrema salsugineum HOM05D006728 ORTHO05D007911 1.4e-90 337.8 481 45.5
ClCG08G000330 Citrullus lanatus HOM05D006728 ORTHO05D007911 1.2e-89 334.7 487 43.3
BraA01t01819Z Brassica rapa HOM05D006728 ORTHO05D007911 1.5e-89 334.3 478 44.1
FvH4_5g32290 Fragaria vesca HOM05D006728 ORTHO05D007911 4.8e-88 329.3 488 42.8
A01p18730 Brassica napus HOM05D006728 ORTHO05D007911 6.3e-88 328.9 478 43.7
C01p23690 Brassica napus HOM05D006728 ORTHO05D007911 8.3e-88 328.6 478 43.9
BolC1t02321H Brassica oleracea HOM05D006728 ORTHO05D007911 8.3e-88 328.6 478 43.9
RcHm_v2.0_Chr7g0228481 Rosa chinensis HOM05D006728 ORTHO05D007911 8.3e-88 328.6 459 45.1
FAN08G1230 Fragaria x ananassa HOM05D006728 ORTHO05D007911 1.1e-87 328.2 486 43.2
FAN18G3195 Fragaria x ananassa HOM05D006728 ORTHO05D007911 1.6e-86 324.3 488 42.4
Sed0021340 Sechium edule HOM05D006728 ORTHO05D007911 1.6e-86 324.3 484 41.1
Carub.0007s1334 Capsella rubella HOM05D006728 ORTHO05D007911 7.7e-86 322.0 480 42.1
FAN13G2633 Fragaria x ananassa HOM05D006728 ORTHO05D007911 1.3e-85 321.2 488 43.0
FAN04G0014 Fragaria x ananassa HOM05D006728 ORTHO05D007911 2.2e-85 320.5 486 42.6
MELO3C022215.2 Cucumis melo HOM05D006728 ORTHO05D007911 9.4e-84 315.1 487 41.5
Cc10_g10290 Coffea canephora HOM05D006728 ORTHO05D007911 4.0e-82 309.7 485 41.4
Haze_13898 Corylus avellana HOM05D006728 ORTHO05D007911 2.2e-80 303.9 484 42.8
Oeu051790.1 Olea europaea HOM05D006728 ORTHO05D007911 7.2e-76 288.9 470 40.9
Nn1g02058 Nelumbo nucifera HOM05D006728 ORTHO05D007911 2.1e-75 287.3 489 38.0
Peaxi162Scf00391g00619 Petunia axillaris HOM05D006728 ORTHO05D007911 2.1e-75 287.3 476 40.5
CsaV3_5G040430 Cucumis sativus L. HOM05D006728 ORTHO05D007911 6.1e-75 285.8 482 39.2
PGR044G1487 Punica granatum HOM05D006728 ORTHO05D007911 1.4e-74 284.6 476 39.1
Migut.C01293 Erythranthe guttata HOM05D006728 ORTHO05D007911 5.7e-73 279.3 484 38.4
BcaNung07241 Brassica carinata HOM05D006728 ORTHO05D007911 4.9e-72 276.2 467 40.0
Migut.J01202 Erythranthe guttata HOM05D006728 ORTHO05D007911 6.4e-72 275.8 479 38.6
Eucgr.J01411 Eucalyptus grandis HOM05D006728 ORTHO05D007911 6.4e-72 275.8 492 37.6
SalBow7G3045 Salvia bowleyana HOM05D006728 ORTHO05D007911 1.4e-71 274.6 485 36.5
Nitab4.5_0000365g0060 Nicotiana tabacum HOM05D006728 ORTHO05D007911 2.4e-71 273.9 477 40.0
PGSC0003DMG400009266 Solanum tuberosum HOM05D006728 ORTHO05D007911 1.6e-70 271.2 476 38.2
HanXRQChr17g0559021 Helianthus annuus HOM05D006728 ORTHO05D007911 2.7e-70 270.4 471 37.2
CAN.G102.5 Capsicum annuum HOM05D006728 ORTHO05D007911 5.9e-70 269.2 477 38.2
Lalb_Chr21g0312581 Lupinus albus HOM05D006728 ORTHO05D007911 1.3e-69 268.1 481 38.0
Solyc11g020910.3 Solanum lycopersicum HOM05D006728 ORTHO05D007911 2.3e-69 267.3 476 37.6
Sopen11g011050 Solanum pennellii HOM05D006728 ORTHO05D007911 3.9e-69 266.5 476 37.8
MSTRG.1553 Avicennia marina HOM05D006728 ORTHO05D007911 1.5e-68 264.6 451 39.9
ECA232G4554 Erigeron canadensis HOM05D006728 ORTHO05D007911 1.0e-66 258.5 481 36.0
SGA_v2.0_scaffold144G35834 Striga asiatica HOM05D005033 ORTHO05D007005 1.0e-66 258.5 465 36.8
DCAR_011523 Daucus carota HOM05D006728 ORTHO05D007911 8.9e-66 255.4 476 37.6
Glyma.02G174700 Glycine max HOM05D006728 ORTHO05D007911 8.9e-66 255.4 457 38.1
unitig_749.g13882 Utricularia gibba HOM05D006728 ORTHO05D007911 7.5e-65 252.3 480 36.0
Lj5g0018420 Lotus japonicus HOM05D006728 ORTHO05D007911 1.9e-63 247.7 486 36.6
Psat6g140120 Pisum sativum HOM05D006728 ORTHO05D007911 9.2e-63 245.4 476 35.3
SHI29298 Sapria himalayana HOM05D006728 ORTHO05D007911 3.5e-62 243.4 333 44.7
Lsat_1_v5_gn_4_133160 Lactuca sativa HOM05D006728 ORTHO05D007911 1.3e-61 241.5 480 35.8
Phvul.L001685 Phaseolus vulgaris HOM05D006728 ORTHO05D007911 2.5e-60 237.3 475 34.7
Medtr1g072850 Medicago truncatula HOM05D006728 ORTHO05D007911 8.1e-59 232.3 476 36.3
Ca_09788_v3 Cicer arietinum L. HOM05D006728 ORTHO05D007911 4.4e-57 226.5 480 34.8
VMungo0720G2132 Vigna mungo HOM05D006728 ORTHO05D007911 5.8e-57 226.1 477 33.1
Nitab4.5_0004437g0010 Nicotiana tabacum HOM05D006728 ORTHO05D007911 7.1e-55 219.2 368 40.8
TPR.G18562 Trifolium pratense HOM05D006728 ORTHO05D007911 9.2e-55 218.8 478 34.9
Aqoxy7G02767 Aquilegia oxysepala HOM05D006728 ORTHO05D007911 1.5e-49 201.4 479 32.8
Glyma.10G191500 Glycine max HOM05D006728 ORTHO05D007911 9.9e-49 198.7 367 37.1
PSO144G0035 Papaver somniferum HOM05D006728 ORTHO05D007911 9.9e-49 198.7 481 32.4
PSO170G3307 Papaver somniferum HOM05D006728 ORTHO05D007911 1.1e-47 195.3 476 30.3
arahy.Tifrunner.gnm1.ann1.PFS1J6 Arachis hypogaea HOM05D006728 ORTHO05D007911 1.7e-45 188.0 473 32.1
PSO325G0011 Papaver somniferum HOM05D006728 ORTHO05D007911 8.6e-45 185.7 442 32.4
arahy.Tifrunner.gnm1.ann1.HTR7VF Arachis hypogaea HOM05D006728 ORTHO05D007911 1.5e-44 184.9 474 32.1
ATR0487G015 Amborella trichopoda HOM05D006728 ORTHO05D007911 3.3e-44 183.7 463 29.2
arahy.Tifrunner.gnm1.ann1.SM6YYV Arachis hypogaea HOM05D006728 ORTHO05D007911 5.6e-44 183.0 473 31.7
arahy.Tifrunner.gnm1.ann1.2Y318K Arachis hypogaea HOM05D006728 ORTHO05D007911 2.1e-43 181.0 473 31.5
PSO325G0006 Papaver somniferum HOM05D006728 ORTHO05D007911 6.2e-43 179.5 345 36.8
Sc24g0002590 Simmondsia chinensis HOM05D006728 ORTHO05D007911 1.2e-41 175.3 483 32.7
AUR62037055 Chenopodium quinoa HOM05D006728 ORTHO05D007911 5.8e-41 172.9 459 32.5
Hund02381 Selenicereus undatus HOM05D006728 ORTHO05D007911 7.8e-38 162.5 483 31.7
EL10Ac7g16629 Beta vulgaris HOM05D006728 ORTHO05D007911 6.2e-35 152.9 452 30.3
Nn3g16574 Nelumbo nucifera HOM05D006728 ORTHO05D007911 1.4e-31 141.7 240 38.8
PSO170G3890 Papaver somniferum HOM05D006728 ORTHO05D007911 9.3e-31 139.0 251 38.6
AUR62036525 Chenopodium quinoa HOM05D006728 ORTHO05D007911 3.5e-30 137.1 315 32.1
Atru.chr1.2803 Acer truncatum HOM05D006728 ORTHO05D007911 1.3e-24 118.6 135 49.6
SEGI_13662 Sequoiadendron giganteum HOM05D013057 ORTHO05D007911 1.6e-22 111.7 494 26.5
HPP92_000129 Vanilla planifolia HOM05D006728 ORTHO05D007911 7.6e-17 92.8 474 24.9
Glyma.20G198732 Glycine max HOM05D006728 ORTHO05D007911 8.4e-16 89.4 125 42.4
CDE05G2798 Ceratophyllum demersum HOM05D006728 ORTHO05D007911 1.4e-15 88.6 129 43.4
Atru.chr1.2802 Acer truncatum HOM05D006728 ORTHO05D007911 7.9e-14 82.8 83 55.4
Cfa008144 Carpinus fangiana HOM05D006728 ORTHO05D007911 1.0e-13 82.4 103 47.6
SHI29297 Sapria himalayana HOM05D006728 ORTHO05D007911 6.7e-13 79.7 76 52.6
Zm00001eb295040 Zea mays HOM05D006728 ORTHO05D007911 2.5e-07 61.2 469 24.3
Glyma.20G198666 Glycine max HOM05D006728 ORTHO05D007911 9.3e-07 59.3 78 46.2
arahy.Tifrunner.gnm1.ann1.G54CSB Arachis hypogaea HOM05D006728 ORTHO05D007911 3.5e-06 57.4 99 33.3


User provided reference genes

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