Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c30366.3 Carica papaya HOM05D005712 ORTHO05D007865 1.2e-76 289.7 139 100.0
Cpa.g.sc26.148 Carica papaya HOM05D005712 ORTHO05D007865 6.8e-35 151.0 79 88.6
Cpa.g.sc26.149 Carica papaya HOM05D005712 ORTHO05D007865 1.5e-34 149.8 79 87.3
COL.COLO4_07687 Corchorus olitorius HOM05D005712 ORTHO05D007865 1.7e-33 146.4 79 82.3
Duzib116G0237 Durio zibethinus HOM05D005712 ORTHO05D007865 2.2e-33 146.0 79 82.3
Manes.05G126100 Manihot esculenta HOM05D005712 ORTHO05D007865 2.9e-33 145.6 79 79.7
Dinv31977 Davidia involucrata HOM05D005712 ORTHO05D007865 3.7e-33 145.2 79 82.3
Atru.chr13.78 Acer truncatum HOM05D005712 ORTHO05D007865 6.4e-33 144.4 79 81.0
Gohir.D05G181100 Gossypium hirsutum HOM05D005712 ORTHO05D007865 6.4e-33 144.4 79 82.3
Gorai.009G186100 Gossypium raimondii HOM05D005712 ORTHO05D007865 6.4e-33 144.4 79 82.3
MD06G1005200 Malus domestica HOM05D005712 ORTHO05D007865 6.4e-33 144.4 79 81.0
Gohir.A05G177700 Gossypium hirsutum HOM05D005712 ORTHO05D007865 8.3e-33 144.1 79 81.0
CANSAT35G0891 Cannabis sativa HOM05D005712 ORTHO05D007865 1.1e-32 143.7 79 79.7
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 1.1e-32 143.7 79 81.0
Prupe.5G006400 Prunus persica HOM05D005712 ORTHO05D007865 1.4e-32 143.3 79 82.3
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 1.4e-32 143.3 79 81.0
Actinidia17068 Actinidia chinensis HOM05D005712 ORTHO05D007865 1.9e-32 142.9 79 79.7
BcaC05g25986 Brassica carinata HOM05D005712 ORTHO05D007865 1.9e-32 142.9 79 79.7
C05p19380 Brassica napus HOM05D005712 ORTHO05D007865 1.9e-32 142.9 79 79.7
BolC5t30641H Brassica oleracea HOM05D005712 ORTHO05D007865 1.9e-32 142.9 79 79.7
VMungo1309G2122 Vigna mungo HOM05D005712 ORTHO05D007865 1.9e-32 142.9 79 78.5
Aa31LG7G4990 Aethionema arabicum HOM05D005712 ORTHO05D007865 2.4e-32 142.5 79 79.7
A06p16820 Brassica napus HOM05D005712 ORTHO05D007865 2.4e-32 142.5 79 78.5
BraA06t24791Z Brassica rapa HOM05D005712 ORTHO05D007865 2.4e-32 142.5 79 78.5
Thhalv10007995m.g Eutrema salsugineum HOM05D005712 ORTHO05D007865 2.4e-32 142.5 79 79.7
Sabra05G0197900 Salix brachista HOM05D005712 ORTHO05D007865 2.4e-32 142.5 79 78.5
Actinidia15518 Actinidia chinensis HOM05D005712 ORTHO05D007865 3.2e-32 142.1 79 78.5
Lj4C5T14 Lonicera japonica HOM05D005712 ORTHO05D007865 3.2e-32 142.1 79 77.2
Lj1g0001697 Lotus japonicus HOM05D005712 ORTHO05D007865 3.2e-32 142.1 79 79.7
Thecc.08G064200 Theobroma cacao HOM05D005712 ORTHO05D007865 3.2e-32 142.1 79 81.0
Cfa014126 Carpinus fangiana HOM05D005712 ORTHO05D007865 4.1e-32 141.7 79 79.7
Nn5g31025 Nelumbo nucifera HOM05D005712 ORTHO05D007865 4.1e-32 141.7 79 79.7
GSVIVG01013413001 Vitis vinifera HOM05D005712 ORTHO05D007865 4.1e-32 141.7 79 81.0
CARHR021260 Cardamine hirsuta HOM05D005712 ORTHO05D007865 5.4e-32 141.4 79 78.5
QL02p015343 Quercus lobata HOM05D005712 ORTHO05D007865 5.4e-32 141.4 79 79.7
Potri.002G006300 Populus trichocarpa HOM05D005712 ORTHO05D007865 7.1e-32 141.0 79 79.7
Sp1g18530 Schrenkiella parvula HOM05D005712 ORTHO05D007865 7.1e-32 141.0 79 77.2
CiPaw.07G134700 Carya illinoinensis HOM05D005712 ORTHO05D007865 9.2e-32 140.6 79 75.9
Ciclev10001686m.g Citrus clementina HOM05D005712 ORTHO05D007865 9.2e-32 140.6 79 78.5
Glyma.06G015100 Glycine max HOM05D005712 ORTHO05D007865 9.2e-32 140.6 79 77.2
Lalb_Chr23g0265571 Lupinus albus HOM05D005712 ORTHO05D007865 9.2e-32 140.6 79 78.5
TAR381G1666 Trochodendron aralioides HOM05D005712 ORTHO05D007865 9.2e-32 140.6 79 77.2
TAR625G0170 Trochodendron aralioides HOM05D005712 ORTHO05D007865 9.2e-32 140.6 79 78.5
BcaB03g12849 Brassica carinata HOM05D005712 ORTHO05D007865 1.2e-31 140.2 79 77.2
BcaB07g32078 Brassica carinata HOM05D005712 ORTHO05D007865 1.2e-31 140.2 79 75.9
MBI05_g08201_MAGBIO Magnolia biondii HOM05D005712 ORTHO05D007865 1.2e-31 140.2 79 78.5
RcHm_v2.0_Chr7g0216471 Rosa chinensis HOM05D005712 ORTHO05D007865 1.2e-31 140.2 79 77.2
TWI56G0384 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 1.2e-31 140.2 79 78.5
arahy.Tifrunner.gnm1.ann1.16JRKN Arachis hypogaea HOM05D005712 ORTHO05D007865 1.6e-31 139.8 79 75.9
arahy.Tifrunner.gnm1.ann1.CTTM8W Arachis hypogaea HOM05D005712 ORTHO05D007865 1.6e-31 139.8 79 75.9
Haze_22847 Corylus avellana HOM05D005712 ORTHO05D007865 1.6e-31 139.8 79 77.2
AT1G20830 Arabidopsis thaliana HOM05D005712 ORTHO05D007865 2.1e-31 139.4 77 79.2
Ca_15390_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 2.1e-31 139.4 79 77.2
Ca_29628_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 2.1e-31 139.4 79 77.2
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 2.1e-31 139.4 79 78.5
AL1G33850 Arabidopsis lyrata HOM05D005712 ORTHO05D007865 2.7e-31 139.0 77 79.2
Eucgr.F03584 Eucalyptus grandis HOM05D005712 ORTHO05D007865 2.7e-31 139.0 79 78.5
Phvul.009G007500 Phaseolus vulgaris HOM05D005712 ORTHO05D007865 2.7e-31 139.0 79 75.9
THA.LOC104813742 Tarenaya hassleriana HOM05D005712 ORTHO05D007865 2.7e-31 139.0 79 75.9
Aqoxy6G01560 Aquilegia oxysepala HOM05D005712 ORTHO05D007865 3.5e-31 138.7 79 78.5
Glyma.04G015100 Glycine max HOM05D005712 ORTHO05D007865 3.5e-31 138.7 79 77.2
Solyc08g042080.3 Solanum lycopersicum HOM05D005712 ORTHO05D007865 3.5e-31 138.7 79 77.2
Sopen08g012540 Solanum pennellii HOM05D005712 ORTHO05D007865 3.5e-31 138.7 79 77.2
PGSC0003DMG400000968 Solanum tuberosum HOM05D005712 ORTHO05D007865 3.5e-31 138.7 79 77.2
Ah.00g001120 Amaranthus hybridus HOM05D005712 ORTHO05D007865 4.6e-31 138.3 79 78.5
Carub.0001s2029 Capsella rubella HOM05D005712 ORTHO05D007865 4.6e-31 138.3 77 79.2
ClCG11G018940 Citrullus lanatus HOM05D005712 ORTHO05D007865 4.6e-31 138.3 79 77.2
CsaV3_4G037540 Cucumis sativus L. HOM05D005712 ORTHO05D007865 4.6e-31 138.3 79 78.5
FvH4_5g25940 Fragaria vesca HOM05D005712 ORTHO05D007865 4.6e-31 138.3 79 75.9
FAN04G3045 Fragaria x ananassa HOM05D005712 ORTHO05D007865 4.6e-31 138.3 79 75.9
FAN13G2028 Fragaria x ananassa HOM05D005712 ORTHO05D007865 4.6e-31 138.3 79 75.9
FAN18G0352 Fragaria x ananassa HOM05D005712 ORTHO05D007865 4.6e-31 138.3 79 75.9
MELO3C017048.2 Cucumis melo HOM05D005712 ORTHO05D007865 6.0e-31 137.9 79 78.5
Nitab4.5_0000486g0150 Nicotiana tabacum HOM05D005712 ORTHO05D007865 6.0e-31 137.9 79 75.9
Nitab4.5_0004637g0020 Nicotiana tabacum HOM05D005712 ORTHO05D007865 6.0e-31 137.9 79 75.9
Oeu004544.1 Olea europaea HOM05D005712 ORTHO05D007865 6.0e-31 137.9 79 75.9
CSS0017080 Camellia sinensis var. sinensis HOM05D005712 ORTHO05D007865 7.8e-31 137.5 79 75.9
Hma1.2p1_0699F.1_g205630 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 7.8e-31 137.5 79 75.9
Hma1.2p1_0699F.1_g205640 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 7.8e-31 137.5 79 75.9
unitig_22.g5745 Utricularia gibba HOM05D005712 ORTHO05D007865 7.8e-31 137.5 79 77.2
CAN.G36.16 Capsicum annuum HOM05D005712 ORTHO05D007865 1.0e-30 137.1 79 75.9
Cc10_g00320 Coffea canephora HOM05D005712 ORTHO05D007865 1.0e-30 137.1 79 75.9
TWI12G0719 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 1.0e-30 137.1 79 77.2
RcHm_v2.0_Chr4g0410601 Rosa chinensis HOM05D005712 ORTHO05D007865 1.3e-30 136.7 79 74.7
SalBow6G6969 Salvia bowleyana HOM05D005712 ORTHO05D007865 1.3e-30 136.7 79 78.5
CDE04G2669 Ceratophyllum demersum HOM05D005712 ORTHO05D007865 1.7e-30 136.3 79 75.9
Sed0012463 Sechium edule HOM05D005712 ORTHO05D007865 1.7e-30 136.3 79 75.9
Peaxi162Scf00632g00416 Petunia axillaris HOM05D005712 ORTHO05D007865 2.3e-30 136.0 79 74.7
MSTRG.22087 Avicennia marina HOM05D005712 ORTHO05D007865 3.0e-30 135.6 79 75.9
SGA_v2.0_scaffold54G19632 Striga asiatica HOM05D005712 ORTHO05D007865 3.0e-30 135.6 79 75.9
Migut.N02981 Erythranthe guttata HOM05D005712 ORTHO05D007865 5.1e-30 134.8 79 74.7
EL10Ac1g01884 Beta vulgaris HOM05D005712 ORTHO05D007865 8.6e-30 134.0 79 73.4
Medtr3g116050 Medicago truncatula HOM05D005712 ORTHO05D007865 8.6e-30 134.0 78 75.6
Potri.005G255300 Populus trichocarpa HOM05D005712 ORTHO05D007865 1.1e-29 133.7 79 73.4
Hund05083 Selenicereus undatus HOM05D005712 ORTHO05D007865 1.1e-29 133.7 79 77.2
ECA238G0561 Erigeron canadensis HOM05D005712 ORTHO05D007865 1.5e-29 133.3 78 75.6
FAN08G0897 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.5e-29 133.3 79 73.4
PSO541G4707 Papaver somniferum HOM05D005712 ORTHO05D007865 1.9e-29 132.9 79 73.4
PSO675G3648 Papaver somniferum HOM05D005712 ORTHO05D007865 1.9e-29 132.9 79 73.4
Psat5g008680 Pisum sativum HOM05D005712 ORTHO05D007865 2.5e-29 132.5 78 74.4
AUR62024105 Chenopodium quinoa HOM05D005712 ORTHO05D007865 3.3e-29 132.1 79 73.4
TPR.G38133 Trifolium pratense HOM05D005712 ORTHO05D007865 3.3e-29 132.1 78 73.1
Cpa.g.c44851 Carica papaya HOM05D005712 ORTHO05D007865 4.3e-29 131.7 69 87.0
AUR62035160 Chenopodium quinoa HOM05D005712 ORTHO05D007865 4.3e-29 131.7 79 73.4
ATR0807G100 Amborella trichopoda HOM05D005712 ORTHO05D007865 7.3e-29 131.0 79 75.9
Lsat_1_v5_gn_2_2221 Lactuca sativa HOM05D005712 ORTHO05D007865 1.6e-28 129.8 78 71.8
HanXRQChr06g0185301 Helianthus annuus HOM05D005712 ORTHO05D007865 2.1e-28 129.4 78 73.1
DCAR_022990 Daucus carota HOM05D000190 ORTHO05D007865 3.6e-28 128.6 75 76.0
Duzib093G1432 Durio zibethinus HOM05D005712 ORTHO05D007865 6.8e-27 124.4 70 78.6
HPP92_022548 Vanilla planifolia HOM05D005712 ORTHO05D007865 5.8e-26 121.3 79 67.1
Zm00001eb072780 Zea mays HOM05D005712 ORTHO05D007865 7.6e-26 120.9 79 64.6
Oeu019899.1 Olea europaea HOM05D005712 ORTHO05D007865 3.7e-25 118.6 79 68.4
Zm00001eb428100 Zea mays HOM05D005712 ORTHO05D007865 8.4e-25 117.5 79 62.0
Os04g0584900 Oryza sativa ssp. japonica HOM05D005712 ORTHO05D007865 3.2e-24 115.5 79 60.8
SEGI_27803 Sequoiadendron giganteum HOM05D005712 ORTHO05D007865 4.6e-23 111.7 75 65.3
Mapoly0022s0159 Marchantia polymorpha HOM05D005712 ORTHO05D007865 4.7e-20 101.7 79 57.0
Pp3c9_6030 Physcomitrium patens HOM05D005712 ORTHO05D007865 5.2e-19 98.2 78 55.1
SMO276G0054 Selaginella moellendorffii HOM05D005712 ORTHO05D007865 8.9e-19 97.4 79 51.9
Pp3c15_5620 Physcomitrium patens HOM05D005712 ORTHO05D007865 9.9e-18 94.0 77 51.9
AagrBONN_evm.TU.Sc2ySwM_117.1031 Anthoceros agrestis HOM05D005712 ORTHO05D007865 3.8e-17 92.0 79 50.6
Oeu019902.1 Olea europaea HOM05D005712 ORTHO05D007865 8.4e-17 90.9 61 70.5
A07p15460 Brassica napus HOM05D005712 ORTHO05D007865 1.9e-08 63.2 41 70.7
Cpa.g.sc26.110 Carica papaya HOM05D005712 ORTHO05D120762 1.0e-06 57.4 29 86.2


User provided reference genes

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