Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c30279.2 Carica papaya HOM05D003824 ORTHO05D001594 1.9e-116 422.5 214 100.0
Thecc.02G300900 Theobroma cacao HOM05D003824 ORTHO05D001594 3.8e-45 185.7 218 54.6
Duzib251G0867 Durio zibethinus HOM05D003824 ORTHO05D001594 1.2e-41 174.1 214 52.8
Gohir.D01G135900 Gossypium hirsutum HOM05D003824 ORTHO05D001594 8.3e-40 167.9 214 54.7
Gorai.002G170200 Gossypium raimondii HOM05D003824 ORTHO05D001594 8.3e-40 167.9 214 54.7
GSVIVG01011569001 Vitis vinifera HOM05D003824 ORTHO05D001594 7.0e-39 164.9 226 51.8
Gohir.A01G144600 Gossypium hirsutum HOM05D003824 ORTHO05D001594 1.6e-38 163.7 214 53.7
QL03p040635 Quercus lobata HOM05D003824 ORTHO05D001594 1.6e-38 163.7 216 49.1
Duzib248G0765 Durio zibethinus HOM05D003824 ORTHO05D001594 7.8e-38 161.4 216 50.0
Dinv07026 Davidia involucrata HOM05D003824 ORTHO05D001594 1.0e-37 161.0 214 50.0
Manes.17G091300 Manihot esculenta HOM05D003824 ORTHO05D001594 4.3e-36 155.6 215 50.7
Potri.010G100700 Populus trichocarpa HOM05D003824 ORTHO05D001594 1.2e-33 147.5 215 51.6
COL.COLO4_27553 Corchorus olitorius HOM05D003824 ORTHO05D001594 2.0e-33 146.7 221 46.6
TWI53G0580 Tripterygium wilfordii HOM05D003824 ORTHO05D001594 2.2e-32 143.3 216 50.0
Dinv01909 Davidia involucrata HOM05D003824 ORTHO05D001594 3.2e-31 139.4 210 47.1
Sabra10G0073200 Salix brachista HOM05D003824 ORTHO05D001594 9.2e-31 137.9 222 47.3
Phvul.002G185400 Phaseolus vulgaris HOM05D003824 ORTHO05D001594 4.6e-30 135.6 217 47.5
Glyma.08G091800 Glycine max HOM05D003824 ORTHO05D001594 7.8e-30 134.8 217 46.5
Nn4g24636 Nelumbo nucifera HOM05D003824 ORTHO05D001594 7.8e-30 134.8 212 43.9
Glyma.05G136600 Glycine max HOM05D003824 ORTHO05D001594 1.0e-29 134.4 214 46.3
Haze_10751 Corylus avellana HOM05D003824 ORTHO05D001594 1.7e-29 133.7 215 46.5
Rhsim09G0082700 Rhododendron simsii HOM05D003824 ORTHO05D001594 2.3e-29 133.3 217 43.8
Ciclev10016179m.g Citrus clementina HOM05D003824 ORTHO05D001594 3.0e-29 132.9 231 48.1
VMungo0251G2986 Vigna mungo HOM05D003824 ORTHO05D001594 1.1e-28 131.0 216 47.2
Manes.15G140200 Manihot esculenta HOM05D003824 ORTHO05D001594 1.5e-28 130.6 217 47.9
TAR622G0215 Trochodendron aralioides HOM05D003824 ORTHO05D001594 1.5e-28 130.6 217 45.6
Actinidia37486 Actinidia chinensis HOM05D003824 ORTHO05D001594 1.9e-28 130.2 238 42.0
Potri.008G140900 Populus trichocarpa HOM05D003824 ORTHO05D001594 4.3e-28 129.0 210 47.6
TWI74G0156 Tripterygium wilfordii HOM05D003824 ORTHO05D001594 5.6e-28 128.6 216 46.8
Hma1.2p1_0068F.1_g037290 Hydrangea macrophylla HOM05D003824 ORTHO05D001594 9.5e-28 127.9 209 45.9
TAR374G0003 Trochodendron aralioides HOM05D003824 ORTHO05D001594 4.7e-27 125.6 208 41.3
Psat7g085960 Pisum sativum HOM05D003824 ORTHO05D001594 1.8e-26 123.6 229 45.9
CiPaw.05G160300 Carya illinoinensis HOM05D003824 ORTHO05D001594 2.3e-26 123.2 209 42.6
CSS0003003 Camellia sinensis var. sinensis HOM05D003824 ORTHO05D001594 5.2e-26 122.1 214 43.5
Nn3g18495 Nelumbo nucifera HOM05D003824 ORTHO05D001594 4.4e-25 119.0 209 43.5
PGR142G4244 Punica granatum HOM05D003824 ORTHO05D001594 4.4e-25 119.0 218 42.7
Sabra08G0106900 Salix brachista HOM05D003824 ORTHO05D001594 1.3e-24 117.5 211 46.4
TPR.G11955 Trifolium pratense HOM05D003824 ORTHO05D001594 1.7e-24 117.1 218 43.6
Lj4g0002501 Lotus japonicus HOM05D003824 ORTHO05D001594 4.9e-24 115.5 223 39.0
vmacro10757 Vaccinium macrocarpon HOM05D003824 ORTHO05D001594 8.3e-24 114.8 220 40.0
Lalb_Chr07g0188021 Lupinus albus HOM05D003824 ORTHO05D001594 2.7e-22 109.8 231 42.9
TAR374G0520 Trochodendron aralioides HOM05D003824 ORTHO05D001594 2.7e-22 109.8 177 41.2
Cc11_g05230 Coffea canephora HOM05D003824 ORTHO05D001594 6.0e-22 108.6 212 41.0
MD16G1011100 Malus domestica HOM05D003824 ORTHO05D001594 6.0e-22 108.6 229 43.7
MD13G1013900 Malus domestica HOM05D003824 ORTHO05D001594 8.6e-21 104.8 231 41.6
Eucgr.B02634 Eucalyptus grandis HOM05D003824 ORTHO05D001594 1.1e-20 104.4 193 38.9
Lj3A858T45 Lonicera japonica HOM05D003824 ORTHO05D001594 1.1e-20 104.4 211 41.2
Oeu024856.1 Olea europaea HOM05D003824 ORTHO05D001594 3.3e-20 102.8 216 40.3
DCAR_002640 Daucus carota HOM05D003824 ORTHO05D001594 7.3e-20 101.7 214 37.4
Prupe.1G339600 Prunus persica HOM05D003824 ORTHO05D001594 7.3e-20 101.7 233 39.9
Ca_18200_v3 Cicer arietinum L. HOM05D003824 ORTHO05D001594 1.2e-19 100.9 189 45.0
FvH4_4g35920 Fragaria vesca HOM05D003824 ORTHO05D001594 2.8e-19 99.8 199 38.7
FAN17G0989 Fragaria x ananassa HOM05D003824 ORTHO05D001594 6.2e-19 98.6 198 37.9
FAN07G0800 Fragaria x ananassa HOM05D003824 ORTHO05D001594 8.1e-19 98.2 199 37.7
FAN12G4100 Fragaria x ananassa HOM05D003824 ORTHO05D001594 8.1e-19 98.2 199 38.2
DCAR_026837 Daucus carota HOM05D003824 ORTHO05D001594 1.1e-18 97.8 213 41.3
RcHm_v2.0_Chr4g0445521 Rosa chinensis HOM05D003824 ORTHO05D001594 1.8e-18 97.1 199 39.2
Oeu044066.1 Olea europaea HOM05D003824 ORTHO05D001594 3.1e-18 96.3 210 43.3
Atru.chr11.978 Acer truncatum HOM05D003824 ORTHO05D001594 2.6e-17 93.2 252 36.5
FAN22G0848 Fragaria x ananassa HOM05D003824 ORTHO05D001594 3.4e-17 92.8 207 35.7
Nitab4.5_0001529g0010 Nicotiana tabacum HOM05D003824 ORTHO05D001594 3.4e-17 92.8 218 39.9
Nitab4.5_0003241g0040 Nicotiana tabacum HOM05D003824 ORTHO05D001594 4.4e-17 92.4 198 39.4
DCAR_030320 Daucus carota HOM05D003824 ORTHO05D001594 2.2e-16 90.1 215 37.2
MBI13_g47388_MAGBIO Magnolia biondii HOM05D003824 ORTHO05D001594 1.1e-15 87.8 210 34.8
MSTRG.2100 Avicennia marina HOM05D003824 ORTHO05D001594 3.2e-15 86.3 221 36.2
Hund04323 Selenicereus undatus HOM05D003824 ORTHO05D001594 2.3e-13 80.1 239 33.5
THA.LOC104824112 Tarenaya hassleriana HOM05D003824 ORTHO05D001594 3.9e-13 79.3 213 34.3
Lalb_Chr12g0209261 Lupinus albus HOM05D003824 ORTHO05D001594 1.5e-12 77.4 180 42.2
MSTRG.13651 Avicennia marina HOM05D003824 ORTHO05D001594 5.6e-12 75.5 204 39.2
AUR62017797 Chenopodium quinoa HOM05D003824 ORTHO05D001594 7.3e-12 75.1 253 30.4
Lsat_1_v5_gn_4_22080 Lactuca sativa HOM05D003824 ORTHO05D001594 8.1e-11 71.6 215 33.5
HanXRQChr16g0527671 Helianthus annuus HOM05D003824 ORTHO05D001594 1.1e-10 71.2 206 35.0
Sp2g13420 Schrenkiella parvula HOM05D003824 ORTHO05D001594 1.1e-10 71.2 204 35.3
Carub.0005s0100 Capsella rubella HOM05D003824 ORTHO05D001594 1.4e-10 70.9 205 35.1
Migut.E00571 Erythranthe guttata HOM05D003824 ORTHO05D001594 1.4e-10 70.9 208 33.7
Sed0021361 Sechium edule HOM05D003824 ORTHO05D001594 4.0e-10 69.3 189 39.2
THA.LOC104805107 Tarenaya hassleriana HOM05D003824 ORTHO05D001594 5.2e-10 68.9 211 31.8
Aqoxy3G04050_Aqoxy3G04051 Aquilegia oxysepala HOM05D003824 ORTHO05D001594 6.9e-10 68.6 195 32.8
MBI19_g02927_MAGBIO Magnolia biondii HOM05D003824 ORTHO05D001594 2.0e-09 67.0 183 35.0
AT2G01990 Arabidopsis thaliana HOM05D003824 ORTHO05D001594 4.4e-09 65.9 208 36.1
BcaB07g30363 Brassica carinata HOM05D003824 ORTHO05D001594 4.4e-09 65.9 205 34.6
Peaxi162Scf00349g00216 Petunia axillaris HOM05D003824 ORTHO05D001594 4.4e-09 65.9 234 31.2
CARHR144590 Cardamine hirsuta HOM05D003824 ORTHO05D001594 5.8e-09 65.5 169 38.5
AT1G14630 Arabidopsis thaliana HOM05D003824 ORTHO05D001594 7.6e-09 65.1 207 32.4
PSO782G3794 Papaver somniferum HOM05D003824 ORTHO05D001594 9.9e-09 64.7 224 28.6
Solyc01g005010.4 Solanum lycopersicum HOM05D003824 ORTHO05D001594 1.7e-08 63.9 206 32.5
PSO063G7219 Papaver somniferum HOM05D003824 ORTHO05D001594 2.2e-08 63.5 224 28.6
AL5G11180 Arabidopsis lyrata HOM05D003824 ORTHO05D001594 4.9e-08 62.4 206 34.0
Sp1g12990 Schrenkiella parvula HOM05D003824 ORTHO05D001594 4.9e-08 62.4 207 31.9
CsaV3_5G017270 Cucumis sativus L. HOM05D003824 ORTHO05D001594 1.1e-07 61.2 186 33.9
CAN.G282.91 Capsicum annuum HOM05D003824 ORTHO05D001594 1.4e-07 60.8 210 31.4
Thhalv10004908m.g Eutrema salsugineum HOM05D003824 ORTHO05D001594 1.4e-07 60.8 167 34.7
Gohir.D04G186600 Gossypium hirsutum HOM05D003824 ORTHO05D001594 1.4e-07 60.8 82 47.6
AL1G26600 Arabidopsis lyrata HOM05D003824 ORTHO05D001594 1.9e-07 60.5 206 30.6
BraA06t24250Z Brassica rapa HOM05D003824 ORTHO05D001594 2.4e-07 60.1 207 31.4
C05p12590 Brassica napus HOM05D003824 ORTHO05D001594 3.2e-07 59.7 207 31.4
BolC5t30003H Brassica oleracea HOM05D003824 ORTHO05D001594 3.2e-07 59.7 207 31.4
Thhalv10008716m.g Eutrema salsugineum HOM05D003824 ORTHO05D001594 4.2e-07 59.3 131 35.9
A06p10680 Brassica napus HOM05D003824 ORTHO05D001594 5.4e-07 58.9 207 31.4
BraA06t24248Z Brassica rapa HOM05D003824 ORTHO05D001594 9.3e-07 58.2 207 31.4
BcaC05g25378 Brassica carinata HOM05D003824 ORTHO05D001594 1.6e-06 57.4 207 30.9
A02p32560 Brassica napus HOM05D003824 ORTHO05D001594 1.6e-06 57.4 205 33.2
BraA02t08274Z Brassica rapa HOM05D003824 ORTHO05D001594 1.6e-06 57.4 205 33.2
Nn4g24596 Nelumbo nucifera HOM05D003824 ORTHO05D001594 2.1e-06 57.0 199 29.6
Sopen01g001100 Solanum pennellii HOM05D003824 ORTHO05D001594 2.1e-06 57.0 204 30.9
TAR687G0001 Trochodendron aralioides HOM05D003824 ORTHO05D001594 2.1e-06 57.0 202 30.7
Aa31LG1G450 Aethionema arabicum HOM05D003824 ORTHO05D001594 2.7e-06 56.6 91 42.9
BcaB02g06532 Brassica carinata HOM05D003824 ORTHO05D001594 2.7e-06 56.6 207 30.9
arahy.Tifrunner.gnm1.ann1.YNYX6A Arachis hypogaea HOM05D003824 ORTHO05D001594 4.6e-06 55.8 105 39.0
C02p50130 Brassica napus HOM05D003824 ORTHO05D001594 6.0e-06 55.5 205 29.8
BolC2t11091H Brassica oleracea HOM05D003824 ORTHO05D001594 6.0e-06 55.5 205 29.8
AUR62003488 Chenopodium quinoa HOM05D003824 ORTHO05D001594 7.8e-06 55.1 174 30.5
ClCG01G006870 Citrullus lanatus HOM05D003824 ORTHO05D001594 7.8e-06 55.1 220 33.2


User provided reference genes

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