Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c30141.1 Carica papaya HOM05D005938 ORTHO05D007654 3.3e-147 525.0 264 100.0
COL.COLO4_24542 Corchorus olitorius HOM05D005938 ORTHO05D007654 1.8e-113 412.9 260 78.1
QL10p016543 Quercus lobata HOM05D005938 ORTHO05D007654 2.4e-113 412.5 261 77.4
TWI15G1099 Tripterygium wilfordii HOM05D005938 ORTHO05D007654 2.4e-113 412.5 264 76.9
Cfa018959 Carpinus fangiana HOM05D005938 ORTHO05D007654 1.3e-111 406.8 259 78.4
CiPaw.11G042800 Carya illinoinensis HOM05D005938 ORTHO05D007654 1.3e-111 406.8 261 77.4
Atru.chr9.2268 Acer truncatum HOM05D005938 ORTHO05D007654 4.2e-110 401.7 261 76.6
Sed0010411 Sechium edule HOM05D005938 ORTHO05D007654 9.4e-110 400.6 263 77.9
Prupe.5G190900 Prunus persica HOM05D005938 ORTHO05D007654 1.6e-109 399.8 263 74.5
Lalb_Chr08g0235801 Lupinus albus HOM05D005938 ORTHO05D007654 7.9e-109 397.5 260 75.4
Sc10g0009920 Simmondsia chinensis HOM05D005938 ORTHO05D007654 1.0e-108 397.1 263 74.5
Ah.02g113360 Amaranthus hybridus HOM05D005938 ORTHO05D007654 1.4e-108 396.7 263 74.5
CsaV3_1G002270 Cucumis sativus L. HOM05D005938 ORTHO05D007654 8.8e-108 394.0 259 76.8
Glyma.06G192800 Glycine max HOM05D005938 ORTHO05D007654 8.8e-108 394.0 263 74.1
EL10Ac5g10981 Beta vulgaris HOM05D005938 ORTHO05D007654 2.0e-107 392.9 262 74.0
GSVIVG01008024001 Vitis vinifera HOM05D005938 ORTHO05D007654 2.0e-107 392.9 262 75.2
MELO3C017167.2 Cucumis melo HOM05D005938 ORTHO05D007654 2.6e-107 392.5 259 77.2
CANSAT80G1410 Cannabis sativa HOM05D005938 ORTHO05D007654 3.3e-107 392.1 263 73.8
AUR62021711 Chenopodium quinoa HOM05D005938 ORTHO05D007654 3.3e-107 392.1 264 73.5
Gohir.D12G179280 Gossypium hirsutum HOM05D005938 ORTHO05D007654 4.4e-107 391.7 259 74.5
FAN08G1160 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.7e-106 389.8 263 72.6
TPR.G11812 Trifolium pratense HOM05D005938 ORTHO05D007654 2.8e-106 389.0 263 73.0
AUR62008387 Chenopodium quinoa HOM05D005938 ORTHO05D007654 4.8e-106 388.3 264 72.7
Ca_13688_v3 Cicer arietinum L. HOM05D005938 ORTHO05D007654 4.8e-106 388.3 261 72.0
FvH4_5g15170 Fragaria vesca HOM05D005938 ORTHO05D007654 4.8e-106 388.3 260 73.5
RcHm_v2.0_Chr7g0181011 Rosa chinensis HOM05D005938 ORTHO05D007654 6.3e-106 387.9 264 72.0
Actinidia34992 Actinidia chinensis HOM05D005938 ORTHO05D007654 8.2e-106 387.5 261 73.2
Gohir.A12G176500 Gossypium hirsutum HOM05D005938 ORTHO05D007654 1.1e-105 387.1 262 72.9
TAR622G1433 Trochodendron aralioides HOM05D005938 ORTHO05D007654 1.1e-105 387.1 258 74.4
CSS0017360 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 1.8e-105 386.3 263 74.1
CSS0040883 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 1.8e-105 386.3 263 74.1
Potri.018G047400 Populus trichocarpa HOM05D005938 ORTHO05D007654 2.4e-105 386.0 263 74.9
Hund09357 Selenicereus undatus HOM05D005938 ORTHO05D007654 2.4e-105 386.0 260 73.8
arahy.Tifrunner.gnm1.ann1.VVHC1U Arachis hypogaea HOM05D005938 ORTHO05D007654 3.1e-105 385.6 261 70.9
TAR374G0085 Trochodendron aralioides HOM05D005938 ORTHO05D007654 4.1e-105 385.2 258 73.6
arahy.Tifrunner.gnm1.ann1.KGI6NM Arachis hypogaea HOM05D005938 ORTHO05D007654 7.0e-105 384.4 261 70.5
Lj1g0012745 Lotus japonicus HOM05D005938 ORTHO05D007654 9.1e-105 384.0 263 71.5
Phvul.009G188150 Phaseolus vulgaris HOM05D005938 ORTHO05D007654 1.2e-104 383.6 264 72.3
Sp5g29710 Schrenkiella parvula HOM05D005938 ORTHO05D007654 2.0e-104 382.9 265 72.8
Eucgr.A02632 Eucalyptus grandis HOM05D005938 ORTHO05D007654 2.6e-104 382.5 259 71.8
Ciclev10021191m.g Citrus clementina HOM05D005938 ORTHO05D007654 4.5e-104 381.7 261 75.5
CARHR067810 Cardamine hirsuta HOM05D005938 ORTHO05D007654 5.9e-104 381.3 263 73.0
Sabra18G0045600 Salix brachista HOM05D005938 ORTHO05D007654 5.9e-104 381.3 263 73.4
MD14G1198100 Malus domestica HOM05D005938 ORTHO05D007654 7.7e-104 380.9 264 71.6
FAN13G2109 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.0e-103 380.6 254 73.2
Atru.BG.195.p Acer truncatum HOM05D005938 ORTHO05D007654 2.9e-103 379.0 255 76.1
Rhsim12G0157100 Rhododendron simsii HOM05D005938 ORTHO05D007654 5.0e-103 378.3 263 71.9
FAN18G0122 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.1e-102 377.1 254 73.2
PGR083G1660 Punica granatum HOM05D005938 ORTHO05D007654 2.5e-102 375.9 259 71.0
AL2G34410 Arabidopsis lyrata HOM05D005938 ORTHO05D007654 3.2e-102 375.6 263 70.3
Carub.0002s2133 Capsella rubella HOM05D005938 ORTHO05D007654 4.2e-102 375.2 265 70.2
A07p40340 Brassica napus HOM05D005938 ORTHO05D007654 5.5e-102 374.8 263 70.7
Nn3g17204 Nelumbo nucifera HOM05D005938 ORTHO05D007654 2.1e-101 372.9 258 70.2
PGSC0003DMG400000598 Solanum tuberosum HOM05D005938 ORTHO05D007654 1.4e-100 370.2 261 69.3
Lj9A462G75 Lonicera japonica HOM05D005938 ORTHO05D007654 5.2e-100 368.2 259 69.1
Migut.D01830 Erythranthe guttata HOM05D005938 ORTHO05D007654 8.8e-100 367.5 260 71.2
FAN04G0099 Fragaria x ananassa HOM05D005938 ORTHO05D007654 8.8e-100 367.5 251 72.5
Thhalv10018904m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 1.1e-99 367.1 262 70.6
ClCG06G016260 Citrullus lanatus HOM05D005938 ORTHO05D007654 1.5e-99 366.7 263 73.8
MD06G1191700 Malus domestica HOM05D005938 ORTHO05D007654 2.0e-99 366.3 264 70.1
BraA07t31575Z Brassica rapa HOM05D005938 ORTHO05D007654 2.6e-99 365.9 275 67.6
Nitab4.5_0004103g0010 Nicotiana tabacum HOM05D005938 ORTHO05D007654 7.5e-99 364.4 261 69.3
PSO063G3647 Papaver somniferum HOM05D005938 ORTHO05D007654 9.7e-99 364.0 267 68.9
MSTRG.9633 Avicennia marina HOM05D005938 ORTHO05D007654 1.7e-98 363.2 260 68.1
BcaC08g46886 Brassica carinata HOM05D005938 ORTHO05D007654 2.2e-98 362.8 254 71.7
Solyc03g116330.3 Solanum lycopersicum HOM05D005938 ORTHO05D007654 4.8e-98 361.7 261 68.6
HanXRQChr05g0158101 Helianthus annuus HOM05D005938 ORTHO05D007654 1.1e-97 360.5 260 69.6
CAN.G407.117 Capsicum annuum HOM05D005938 ORTHO05D007654 7.0e-97 357.8 261 68.6
SalBow7G2600 Salvia bowleyana HOM05D005938 ORTHO05D007654 7.0e-97 357.8 260 67.3
Peaxi162Scf00274g00846 Petunia axillaris HOM05D005938 ORTHO05D007654 1.6e-96 356.7 267 68.2
BcaC08g46988 Brassica carinata HOM05D005938 ORTHO05D007654 2.0e-96 356.3 255 69.0
Cc04_g16920 Coffea canephora HOM05D005938 ORTHO05D007654 2.0e-96 356.3 261 67.0
Oeu016169.1 Olea europaea HOM05D005938 ORTHO05D007654 5.9e-96 354.8 265 68.3
Duzib205G1012 Durio zibethinus HOM05D005938 ORTHO05D007654 6.5e-95 351.3 260 70.8
vmacro16554 Vaccinium macrocarpon HOM05D005938 ORTHO05D007654 6.5e-95 351.3 294 63.6
Sopen03g035260 Solanum pennellii HOM05D005938 ORTHO05D007654 1.1e-94 350.5 252 68.7
ATR0564G381 Amborella trichopoda HOM05D005938 ORTHO05D007654 1.9e-94 349.7 263 65.0
THA.LOC104812546 Tarenaya hassleriana HOM05D005938 ORTHO05D007654 1.9e-94 349.7 262 67.9
ECA246G4427 Erigeron canadensis HOM05D005938 ORTHO05D007654 4.2e-94 348.6 262 66.4
Nitab4.5_0002257g0140 Nicotiana tabacum HOM05D005938 ORTHO05D007654 4.2e-94 348.6 289 63.0
CDE02G0021 Ceratophyllum demersum HOM05D005938 ORTHO05D007654 2.7e-93 345.9 264 64.8
DCAR_021525 Daucus carota HOM05D005938 ORTHO05D007654 1.8e-92 343.2 279 63.4
Thecc.03G084300 Theobroma cacao HOM05D005938 ORTHO05D007654 1.8e-92 343.2 260 69.2
Psat5g187160 Pisum sativum HOM05D005938 ORTHO05D007654 2.3e-92 342.8 227 74.4
Lsat_1_v5_gn_5_19401 Lactuca sativa HOM05D005938 ORTHO05D007654 4.0e-92 342.0 258 67.8
Aa31LG7G3570 Aethionema arabicum HOM05D005938 ORTHO05D007654 6.8e-92 341.3 261 66.3
Gorai.008G192300 Gossypium raimondii HOM05D005938 ORTHO05D007654 4.4e-91 338.6 241 70.5
Manes.06G094000 Manihot esculenta HOM05D005938 ORTHO05D007654 1.8e-89 333.2 264 66.7
Os08g0171000 Oryza sativa ssp. japonica HOM05D005938 ORTHO05D007654 9.1e-89 330.9 258 62.0
unitig_744.g24387 Utricularia gibba HOM05D005938 ORTHO05D007654 2.0e-88 329.7 259 64.5
SGA_v2.0_scaffold114G31898 Striga asiatica HOM05D005938 ORTHO05D007654 4.5e-88 328.6 259 65.3
Aqoxy3G03351 Aquilegia oxysepala HOM05D005938 ORTHO05D007654 7.2e-86 321.2 227 71.8
BcaC08g46884 Brassica carinata HOM05D005938 ORTHO05D007654 2.7e-85 319.3 289 59.2
SHI04241 Sapria himalayana HOM05D005938 ORTHO05D007654 1.0e-84 317.4 318 54.1
Dinv38693 Davidia involucrata HOM05D005938 ORTHO05D007654 2.6e-83 312.8 198 78.8
SEGI_36934 Sequoiadendron giganteum HOM05D005938 ORTHO05D007654 2.6e-83 312.8 260 59.6
Mapoly0002s0073 Marchantia polymorpha HOM05D005938 ORTHO05D007654 6.3e-82 308.1 260 58.8
C06p48680 Brassica napus HOM05D005938 ORTHO05D007654 5.9e-80 301.6 195 74.9
Aa31LG4G4790 Aethionema arabicum HOM05D005938 ORTHO05D007654 2.8e-77 292.7 207 70.5
BolC6t39901H Brassica oleracea HOM05D005938 ORTHO05D007654 1.8e-76 290.0 205 71.7
Medtr0036s0320 Medicago truncatula HOM05D005938 ORTHO05D007654 2.6e-75 286.2 192 71.4
AT1G74530 Arabidopsis thaliana HOM05D005938 ORTHO05D007654 1.1e-73 280.8 199 71.4
Haze_07341 Corylus avellana HOM05D005938 ORTHO05D007654 1.2e-72 277.3 306 53.9
CSS0050188 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 3.3e-70 269.2 186 74.2
Pp3c17_15280 Physcomitrium patens HOM05D005938 ORTHO05D007654 3.4e-67 259.2 258 53.5
VMungo1309G2195 Vigna mungo HOM05D005938 ORTHO05D007654 1.7e-63 246.9 176 69.3
Hma1.2p1_0735F.1_g210490 Hydrangea macrophylla HOM05D005938 ORTHO05D007654 4.3e-62 242.3 166 73.5
AagrBONN_evm.TU.Sc2ySwM_117.1670 Anthoceros agrestis HOM05D005938 ORTHO05D007654 1.4e-60 237.3 259 47.9
SMO270G0117 Selaginella moellendorffii HOM05D005938 ORTHO05D007654 2.3e-60 236.5 259 47.1
MBI02_g23681_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 5.8e-59 231.9 164 70.7
FAN10G3346 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.2e-58 229.9 146 78.1
CBR_g66809 Chara braunii HOM05D005938 ORTHO05D007654 9.5e-54 214.5 265 43.0
Glyma.04G170700 Glycine max HOM05D005938 ORTHO05D007654 2.1e-45 186.8 113 78.8
Zm00001eb415000 Zea mays HOM05D005938 ORTHO05D007654 8.1e-45 184.9 180 56.7
MCO16G029 Micromonas commoda HOM05D005938 ORTHO05D007654 9.9e-35 151.4 278 34.9
arahy.Tifrunner.gnm1.ann1.518D86 Arachis hypogaea HOM05D005938 ORTHO05D007654 2.9e-34 149.8 144 54.9
FAN18G0131 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.7e-32 143.3 155 54.2
QL07p001114 Quercus lobata HOM05D005938 ORTHO05D007654 3.6e-29 132.9 169 47.9
MBI15_g27838_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 6.2e-29 132.1 163 48.5
FAN01G1759 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.4e-28 130.2 84 75.0
Cre12.g513300 Chlamydomonas reinhardtii HOM05D005938 ORTHO05D007654 3.4e-27 126.3 226 34.1
CSS0038577 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 1.9e-25 120.6 85 68.2
Prupe.5G190800 Prunus persica HOM05D005938 ORTHO05D007654 4.2e-25 119.4 85 67.1
QL02p071402 Quercus lobata HOM05D005938 ORTHO05D028155 1.2e-24 117.9 69 78.3
MD17G1094500 Malus domestica HOM05D005938 ORTHO05D007654 4.6e-24 115.9 79 72.2
QL12p034017 Quercus lobata HOM05D000176 ORTHO05D000106 4.6e-24 115.9 114 53.5
VMungo0019G0001 Vigna mungo HOM05D005938 ORTHO05D007654 1.1e-22 111.3 71 77.5
Medtr3g040450 Medicago truncatula HOM05D005938 ORTHO05D007654 5.6e-22 109.0 74 70.3
PRCOL_00003564 Prasinoderma coloniale HOM05D005938 ORTHO05D007654 5.6e-22 109.0 249 32.5
Thhalv10000377m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 3.0e-07 60.1 91 41.8


User provided reference genes

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