Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c29666.1 Carica papaya HOM05D007179 ORTHO05D009124 1.0e-76 290.0 148 100.0
CiPaw.08G039500 Carya illinoinensis HOM05D007179 ORTHO05D009124 1.6e-45 186.4 124 75.0
Rhsim01G0010000 Rhododendron simsii HOM05D007179 ORTHO05D009124 5.0e-44 181.4 126 70.6
CiPaw.07G187200 Carya illinoinensis HOM05D007179 ORTHO05D009124 1.1e-43 180.3 124 71.8
Gorai.009G007600 Gossypium raimondii HOM05D007179 ORTHO05D009124 6.1e-42 174.5 129 70.5
Gohir.A05G006600 Gossypium hirsutum HOM05D007179 ORTHO05D009124 8.0e-42 174.1 129 70.5
Sed0008122 Sechium edule HOM05D007179 ORTHO05D009124 1.0e-41 173.7 116 72.4
Gohir.D05G007500 Gossypium hirsutum HOM05D007179 ORTHO05D009124 2.3e-41 172.6 129 69.8
Atru.chr7.533 Acer truncatum HOM05D007179 ORTHO05D009124 3.0e-41 172.2 140 64.3
Dinv41297 Davidia involucrata HOM05D007179 ORTHO05D009124 3.0e-41 172.2 149 63.1
CANSAT11G0330 Cannabis sativa HOM05D007179 ORTHO05D009124 2.0e-40 169.5 119 71.4
Oeu058831.1 Olea europaea HOM05D007179 ORTHO05D009124 2.0e-40 169.5 146 61.6
Thecc.09G162500 Theobroma cacao HOM05D007179 ORTHO05D009124 2.0e-40 169.5 124 70.2
TWI63G0613 Tripterygium wilfordii HOM05D007179 ORTHO05D009124 2.6e-40 169.1 122 69.7
Nn1g04316 Nelumbo nucifera HOM05D007179 ORTHO05D009124 3.4e-40 168.7 128 65.6
MSTRG.26242 Avicennia marina HOM05D007179 ORTHO05D009124 7.5e-40 167.5 142 63.4
Potri.006G175600 Populus trichocarpa HOM05D007179 ORTHO05D009124 9.8e-40 167.2 147 62.6
Lalb_Chr13g0300481 Lupinus albus HOM05D007179 ORTHO05D009124 3.7e-39 165.2 124 66.1
MELO3C004033.2 Cucumis melo HOM05D007179 ORTHO05D009124 4.9e-39 164.9 123 68.3
Manes.06G029800 Manihot esculenta HOM05D007179 ORTHO05D009124 6.3e-39 164.5 136 62.5
TAR626G0641 Trochodendron aralioides HOM05D007179 ORTHO05D009124 8.3e-39 164.1 124 66.9
SalBow1G0390 Salvia bowleyana HOM05D007179 ORTHO05D009124 1.1e-38 163.7 123 65.9
GSVIVG01032307001 Vitis vinifera HOM05D007179 ORTHO05D009124 1.4e-38 163.3 134 64.2
Sabra06G0134300 Salix brachista HOM05D007179 ORTHO05D009124 2.4e-38 162.5 147 60.5
arahy.Tifrunner.gnm1.ann1.7FN6WP Arachis hypogaea HOM05D007179 ORTHO05D009124 3.1e-38 162.2 135 60.7
arahy.Tifrunner.gnm1.ann1.8TJD28 Arachis hypogaea HOM05D007179 ORTHO05D009124 4.1e-38 161.8 124 62.9
Psat0s236g0160 Pisum sativum HOM05D007179 ORTHO05D009124 5.4e-38 161.4 124 60.5
Medtr4g129320 Medicago truncatula HOM05D007179 ORTHO05D009124 7.0e-38 161.0 142 57.0
CSS0047035 Camellia sinensis var. sinensis HOM05D007179 ORTHO05D009124 1.2e-37 160.2 123 65.0
MD16G1263600 Malus domestica HOM05D007179 ORTHO05D009124 1.6e-37 159.8 122 65.6
Prupe.1G095600 Prunus persica HOM05D007179 ORTHO05D009124 2.0e-37 159.5 122 63.1
PGR102G1777 Punica granatum HOM05D007179 ORTHO05D009124 3.5e-37 158.7 122 69.7
ClCG11G012230 Citrullus lanatus HOM05D007179 ORTHO05D009124 4.5e-37 158.3 115 68.7
Lsat_1_v5_gn_8_65641 Lactuca sativa HOM05D007179 ORTHO05D009124 4.5e-37 158.3 124 65.3
ECA236G0374 Erigeron canadensis HOM05D007179 ORTHO05D009124 1.7e-36 156.4 124 61.3
CsaV3_2G008330 Cucumis sativus L. HOM05D007179 ORTHO05D009124 2.9e-36 155.6 128 65.6
THA.LOC104817810 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 2.9e-36 155.6 120 65.8
Glyma.17G067900 Glycine max HOM05D007179 ORTHO05D009124 3.8e-36 155.2 125 64.8
Ciclev10009752m.g Citrus clementina HOM05D007179 ORTHO05D009124 6.6e-36 154.5 114 66.7
Lj4g0019685 Lotus japonicus HOM05D007179 ORTHO05D009124 1.1e-35 153.7 136 57.4
FvH4_4g08570 Fragaria vesca HOM05D007179 ORTHO05D009124 7.3e-35 151.0 144 56.9
RcHm_v2.0_Chr4g0404651 Rosa chinensis HOM05D007179 ORTHO05D009124 7.3e-35 151.0 135 58.5
Actinidia24032 Actinidia chinensis HOM05D007179 ORTHO05D009124 9.5e-35 150.6 120 65.8
Eucgr.C02437 Eucalyptus grandis HOM05D007179 ORTHO05D009124 1.2e-34 150.2 122 63.1
Duzib150G1658 Durio zibethinus HOM05D007179 ORTHO05D009124 2.8e-34 149.1 97 74.2
VMungo1215G3157 Vigna mungo HOM05D007179 ORTHO05D009124 2.8e-34 149.1 121 63.6
THA.LOC104811817 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 4.7e-34 148.3 151 55.6
Cc06_g13840 Coffea canephora HOM05D007179 ORTHO05D009124 8.0e-34 147.5 123 61.0
Migut.K00269 Erythranthe guttata HOM05D007179 ORTHO05D009124 1.8e-33 146.4 144 56.9
HanXRQChr05g0136491 Helianthus annuus HOM05D007179 ORTHO05D009124 2.3e-33 146.0 124 61.3
COL.COLO4_16058 Corchorus olitorius HOM05D007179 ORTHO05D009124 4.0e-33 145.2 127 63.8
Aa31LG3G160 Aethionema arabicum HOM05D007179 ORTHO05D009124 6.8e-33 144.4 111 67.6
AL7G24590 Arabidopsis lyrata HOM05D007179 ORTHO05D009124 8.9e-33 144.1 115 64.3
Hund08993 Selenicereus undatus HOM05D007179 ORTHO05D009124 2.6e-32 142.5 130 60.0
BcaNung01603 Brassica carinata HOM05D007179 ORTHO05D009124 4.4e-32 141.7 118 61.0
Phvul.003G150500 Phaseolus vulgaris HOM05D007179 ORTHO05D009124 4.4e-32 141.7 147 56.5
Thhalv10026434m.g Eutrema salsugineum HOM05D007179 ORTHO05D009124 9.8e-32 140.6 114 60.5
BraA01t01881Z Brassica rapa HOM05D007179 ORTHO05D009124 2.2e-31 139.4 137 54.7
Carub.0007s1277 Capsella rubella HOM05D007179 ORTHO05D009124 2.2e-31 139.4 115 62.6
DCAR_017946 Daucus carota HOM05D007179 ORTHO05D009124 2.2e-31 139.4 119 61.3
A01p19410 Brassica napus HOM05D007179 ORTHO05D009124 2.9e-31 139.0 137 54.0
MBI15_g26085_MAGBIO Magnolia biondii HOM05D007179 ORTHO05D009124 2.9e-31 139.0 98 68.4
Sp7g25970 Schrenkiella parvula HOM05D007179 ORTHO05D009124 2.9e-31 139.0 129 55.0
AT4G28025 Arabidopsis thaliana HOM05D007179 ORTHO05D009124 3.7e-31 138.7 115 61.7
C01p24450 Brassica napus HOM05D007179 ORTHO05D009124 4.9e-31 138.3 114 60.5
BolC1t02394H Brassica oleracea HOM05D007179 ORTHO05D009124 4.9e-31 138.3 116 60.3
Peaxi162Scf00457g00318 Petunia axillaris HOM05D007179 ORTHO05D009124 6.4e-31 137.9 124 58.9
C07p55870 Brassica napus HOM05D007179 ORTHO05D009124 1.4e-30 136.7 128 57.0
Lj9A729T43 Lonicera japonica HOM05D007179 ORTHO05D009124 1.4e-30 136.7 115 57.4
Solyc07g006490.3 Solanum lycopersicum HOM05D007179 ORTHO05D009124 1.9e-30 136.3 124 56.5
Sc14g0001110 Simmondsia chinensis HOM05D007179 ORTHO05D009124 2.4e-30 136.0 106 64.2
Sopen07g002570 Solanum pennellii HOM05D007179 ORTHO05D009124 2.4e-30 136.0 124 56.5
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 4.1e-30 135.2 129 55.8
Nitab4.5_0011540g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 4.1e-30 135.2 103 67.0
PGSC0003DMG400027448 Solanum tuberosum HOM05D007179 ORTHO05D009124 5.4e-30 134.8 124 55.6
Aqoxy7G03201 Aquilegia oxysepala HOM05D007179 ORTHO05D009124 9.2e-30 134.0 129 53.5
BcaC06g32651 Brassica carinata HOM05D007179 ORTHO05D009124 1.2e-29 133.7 125 56.8
BraA03t14832Z Brassica rapa HOM05D007179 ORTHO05D009124 2.0e-29 132.9 133 54.9
A03p57660 Brassica napus HOM05D007179 ORTHO05D009124 2.7e-29 132.5 133 54.9
AUR62040282 Chenopodium quinoa HOM05D007179 ORTHO05D009124 7.8e-29 131.0 119 59.7
vmacro13080 Vaccinium macrocarpon HOM05D007179 ORTHO05D009124 1.3e-28 130.2 87 74.7
CARHR235720 Cardamine hirsuta HOM05D007179 ORTHO05D009124 3.9e-28 128.6 114 57.9
AUR62039974 Chenopodium quinoa HOM05D007179 ORTHO05D009124 5.0e-28 128.3 133 55.6
Hund26395 Selenicereus undatus HOM05D007179 ORTHO05D009124 7.3e-27 124.4 128 51.6
PSO063G6628 Papaver somniferum HOM05D007179 ORTHO05D009124 2.1e-26 122.9 124 53.2
FAN22G0121 Fragaria x ananassa HOM05D007179 ORTHO05D009124 3.6e-26 122.1 84 73.8
PSO782G3484 Papaver somniferum HOM05D007179 ORTHO05D009124 1.4e-25 120.2 127 52.0
EL10Ac8g18859 Beta vulgaris HOM05D007179 ORTHO05D009124 1.8e-25 119.8 86 69.8
unitig_37.g12688 Utricularia gibba HOM05D007179 ORTHO05D009124 1.8e-25 119.8 107 55.1
CAN.G584.44 Capsicum annuum HOM05D007179 ORTHO05D009124 2.3e-25 119.4 104 57.7
HPP92_018535 Vanilla planifolia HOM05D007179 ORTHO05D009124 2.0e-24 116.3 101 60.4
ATR0580G253 Amborella trichopoda HOM05D007179 ORTHO05D009124 3.4e-24 115.5 123 50.4
FAN17G2417 Fragaria x ananassa HOM05D007179 ORTHO05D009124 8.3e-23 110.9 72 75.0
Ca_21187_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009942 1.2e-21 107.1 76 68.4
Actinidia24777 Actinidia chinensis HOM05D007179 ORTHO05D009124 3.5e-21 105.5 70 75.7
CDE02G2992 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 6.0e-21 104.8 75 66.7
CDE05G2983 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 6.0e-21 104.8 97 56.7
Nitab4.5_0002004g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 1.0e-20 104.0 74 68.9
Haze_22156 Corylus avellana HOM05D007179 ORTHO05D009124 1.6e-18 96.7 75 62.7
Zm00001eb246810 Zea mays HOM05D007179 ORTHO05D009124 2.1e-18 96.3 69 73.9
Medtr4g129300 Medicago truncatula HOM05D007179 ORTHO05D009124 5.2e-17 91.7 66 66.7
AagrBONN_evm.TU.Sc2ySwM_362.2423 Anthoceros agrestis HOM05D007179 ORTHO05D009124 6.8e-17 91.3 74 59.5
Mapoly0124s0027 Marchantia polymorpha HOM05D007179 ORTHO05D009124 5.8e-16 88.2 65 61.5
Pp3c12_25950 Physcomitrium patens HOM05D007179 ORTHO05D009124 2.9e-15 85.9 73 52.1
SMO358G0032 Selaginella moellendorffii HOM05D007179 ORTHO05D009124 8.3e-15 84.3 80 51.2
SGA_v2.0_scaffold325G48698 Striga asiatica HOM05D007179 ORTHO05D009124 2.4e-14 82.8 81 54.3
Dinv42771 Davidia involucrata HOM05D007179 ORTHO05D009124 3.2e-14 82.4 76 56.6
BcaC09g50519 Brassica carinata HOM05D000147 ORTHO05D013131 4.1e-14 82.0 57 63.2
Haze_22155 Corylus avellana HOM05D007179 ORTHO05D009124 1.5e-11 73.6 49 67.3
Dinv43332 Davidia involucrata HOM05D007179 ORTHO05D009124 4.2e-06 55.5 42 59.5


User provided reference genes

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