Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c28448.3 Carica papaya HOM05D000307 ORTHO05D000166 2.6e-65 251.9 127 100.0
Cpa.g.c38760 Carica papaya HOM05D000307 ORTHO05D000166 3.8e-56 221.5 127 89.0
Cpa.g.c25049.4 Carica papaya HOM05D000307 ORTHO05D000166 7.3e-52 207.2 109 97.2
Cpa.g.sc265.1 Carica papaya HOM05D000307 ORTHO05D000166 3.6e-43 178.3 100 92.0
Cpa.g.sc30.164 Carica papaya HOM05D000307 ORTHO05D000166 1.6e-38 162.9 95 88.4
Cpa.g.c33457.2 Carica papaya HOM05D000307 ORTHO05D000166 1.3e-37 159.8 102 82.4
Cpa.g.sc30.165 Carica papaya HOM05D000307 ORTHO05D000166 2.3e-37 159.1 94 88.3
Cpa.g.sc1750.2 Carica papaya HOM05D000307 ORTHO05D000166 4.9e-32 141.4 74 97.3
Cpa.g.sc265.5 Carica papaya HOM05D000307 ORTHO05D000166 4.9e-32 141.4 82 87.8
Cpa.g.sc185.11 Carica papaya HOM05D000307 ORTHO05D000166 8.4e-32 140.6 87 83.9
Cpa.g.c40499.1 Carica papaya HOM05D000307 ORTHO05D000166 1.9e-31 139.4 78 91.0
Cpa.g.c32899.2 Carica papaya HOM05D000307 ORTHO05D000166 1.7e-24 116.3 70 84.3
Cpa.g.sc135.3 Carica papaya HOM05D000307 ORTHO05D000166 2.9e-24 115.5 71 81.7
Cpa.g.sc30.163 Carica papaya HOM05D000307 ORTHO05D000166 2.9e-24 115.5 68 85.3
Cpa.g.c46342 Carica papaya HOM05D000307 ORTHO05D000166 6.5e-24 114.4 68 83.8
Cpa.g.sc265.3 Carica papaya HOM05D000307 ORTHO05D000166 3.2e-23 112.1 75 77.3
Cpa.g.sc265.6 Carica papaya HOM05D000307 ORTHO05D000166 3.2e-23 112.1 75 77.3
Cpa.g.sc139.40 Carica papaya HOM05D000307 ORTHO05D000166 7.1e-23 110.9 85 70.6
Cpa.g.c29396 Carica papaya HOM05D000307 ORTHO05D000166 6.0e-22 107.8 65 83.1
Cpa.g.c24608 Carica papaya HOM05D000307 ORTHO05D000166 3.0e-21 105.5 67 79.1
Cpa.g.sc44.14 Carica papaya HOM05D000307 ORTHO05D000166 3.3e-20 102.1 88 65.9
Cpa.g.sc185.5 Carica papaya HOM05D000307 ORTHO05D000166 1.4e-15 86.7 74 62.2
Cpa.g.sc217.21 Carica papaya HOM05D000307 ORTHO05D000166 3.6e-14 82.0 75 61.3
Ciclev10013728m.g Citrus clementina HOM05D000307 ORTHO05D000166 3.6e-14 82.0 132 43.9
Cpa.g.c25253.2 Carica papaya HOM05D000307 ORTHO05D000166 3.0e-13 79.0 91 53.8
Prupe.1G533700 Prunus persica HOM05D000307 ORTHO05D000166 6.7e-13 77.8 127 43.3
Cpa.g.c28448.1 Carica papaya HOM05D000307 ORTHO05D000166 4.3e-12 75.1 45 82.2
Cpa.g.c40915 Carica papaya HOM05D000307 ORTHO05D000166 5.7e-12 74.7 49 77.6
Duzib177G1026 Durio zibethinus HOM05D000307 ORTHO05D000166 7.4e-12 74.3 135 40.0
Ciclev10006519m.g Citrus clementina HOM05D000307 ORTHO05D000166 9.7e-12 73.9 128 39.1
Duzib150G0239 Durio zibethinus HOM05D000307 ORTHO05D000166 9.7e-12 73.9 132 41.7
Cpa.g.sc185.14 Carica papaya HOM05D000307 ORTHO05D000166 1.3e-11 73.6 43 86.0
Cfa004392 Carpinus fangiana HOM05D000307 ORTHO05D000166 1.7e-11 73.2 134 40.3
Cpa.g.c25253.4 Carica papaya HOM05D000307 ORTHO05D000166 2.8e-11 72.4 49 75.5
Cpa.g.sc5245.1 Carica papaya HOM05D000307 ORTHO05D000166 5.3e-10 68.2 32 100.0
QL03p011032 Quercus lobata HOM05D000307 ORTHO05D000166 5.3e-10 68.2 145 37.9
Gohir.D08G273600 Gossypium hirsutum HOM05D000307 ORTHO05D000166 9.1e-10 67.4 136 39.7
Gorai.004G292000 Gossypium raimondii HOM05D000307 ORTHO05D000166 9.1e-10 67.4 136 39.7
QL03p011092 Quercus lobata HOM05D000307 ORTHO05D000166 9.1e-10 67.4 142 38.7
GSVIVG01031333001 Vitis vinifera HOM05D000307 ORTHO05D000166 9.1e-10 67.4 117 39.3
Peaxi162Scf00222g00046 Petunia axillaris HOM05D000307 ORTHO05D000166 1.2e-09 67.0 125 37.6
Cpa.g.sc2248.1 Carica papaya HOM05D000307 ORTHO05D000166 2.0e-09 66.2 32 96.9
MD15G1387300 Malus domestica HOM05D000307 ORTHO05D000166 2.0e-09 66.2 142 39.4
Manes.08G107300 Manihot esculenta HOM05D000307 ORTHO05D000166 2.6e-09 65.9 133 36.8
Potri.013G018100 Populus trichocarpa HOM05D000307 ORTHO05D000166 4.5e-09 65.1 123 39.8
Peaxi162Scf00194g00005 Petunia axillaris HOM05D000307 ORTHO05D000166 7.7e-09 64.3 125 36.8
ClCG03G017900 Citrullus lanatus HOM05D000307 ORTHO05D000166 1.3e-08 63.5 127 36.2
Prupe.1G533600 Prunus persica HOM05D000307 ORTHO05D000166 1.3e-08 63.5 127 34.6
MD08G1200100 Malus domestica HOM05D000307 ORTHO05D000166 1.7e-08 63.2 141 36.9
Gohir.A08G252000 Gossypium hirsutum HOM05D000307 ORTHO05D000166 2.2e-08 62.8 138 38.4
Rhsim11G0105500 Rhododendron simsii HOM05D000307 ORTHO05D000166 2.2e-08 62.8 137 32.8
Sabra13G0020900 Salix brachista HOM05D000307 ORTHO05D000166 2.2e-08 62.8 118 43.2
Cpa.g.sc265.4 Carica papaya HOM05D000307 ORTHO05D000166 2.9e-08 62.4 37 83.8
MELO3C015239.2 Cucumis melo HOM05D000307 ORTHO05D000166 2.9e-08 62.4 124 36.3
Manes.09G181500 Manihot esculenta HOM05D000307 ORTHO05D000166 2.9e-08 62.4 128 35.9
Peaxi162Scf00222g00424 Petunia axillaris HOM05D000307 ORTHO05D000166 3.8e-08 62.0 116 39.7
Cpa.g.sc220.11 Carica papaya HOM05D000307 ORTHO05D000166 5.0e-08 61.6 34 85.3
TWI75G1381 Tripterygium wilfordii HOM05D000307 ORTHO05D000166 1.9e-07 59.7 130 37.7
CSS0048763 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 2.5e-07 59.3 129 34.1
TWI38G0721 Tripterygium wilfordii HOM05D000307 ORTHO05D000166 2.5e-07 59.3 139 38.1
Peaxi162Scf00487g00043 Petunia axillaris HOM05D000307 ORTHO05D000166 3.2e-07 58.9 125 36.0
Lj5P318T22 Lonicera japonica HOM05D000307 ORTHO05D000166 4.2e-07 58.5 124 34.7
Solyc01g102260.3 Solanum lycopersicum HOM05D000307 ORTHO05D000166 4.2e-07 58.5 139 33.1
CSS0049706 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 5.5e-07 58.2 125 34.4
CsaV3_1G038060 Cucumis sativus L. HOM05D000307 ORTHO05D000166 5.5e-07 58.2 127 33.9
COL.COLO4_22983 Corchorus olitorius HOM05D000307 ORTHO05D000166 7.2e-07 57.8 99 37.4
Nitab4.5_0001463g0130 Nicotiana tabacum HOM05D000307 ORTHO05D000166 7.2e-07 57.8 128 31.2
Thecc.05G329800 Theobroma cacao HOM05D000307 ORTHO05D000166 7.2e-07 57.8 129 31.0
Atru.chr7.177 Acer truncatum HOM05D000307 ORTHO05D000166 9.4e-07 57.4 111 36.0
CSS0043934 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 1.2e-06 57.0 123 30.9
Sed0022320 Sechium edule HOM05D000307 ORTHO05D000166 1.2e-06 57.0 44 61.4
CAN.G1248.14 Capsicum annuum HOM05D000307 ORTHO05D000166 1.6e-06 56.6 136 36.0
Cpa.g.sc34.38 Carica papaya HOM05D000307 ORTHO05D000166 1.6e-06 56.6 76 47.4
Haze_15018 Corylus avellana HOM05D000307 ORTHO05D000166 1.6e-06 56.6 124 37.1
FAN02G0711 Fragaria x ananassa HOM05D000307 ORTHO05D000166 2.7e-06 55.8 40 62.5
Prupe.6G304100 Prunus persica HOM05D000307 ORTHO05D000166 2.7e-06 55.8 141 34.8
Sopen01g044720 Solanum pennellii HOM05D000307 ORTHO05D000166 2.7e-06 55.8 142 32.4
FvH4_6g43410 Fragaria vesca HOM05D000307 ORTHO05D000166 3.6e-06 55.5 39 64.1
FAN14G0127 Fragaria x ananassa HOM05D000307 ORTHO05D000166 3.6e-06 55.5 39 64.1
Thecc.10G049500 Theobroma cacao HOM05D000307 ORTHO05D000166 3.6e-06 55.5 120 31.7
Cpa.g.sc135.2 Carica papaya HOM05D000307 ORTHO05D000166 4.7e-06 55.1 32 81.2
Cc02_g35890 Coffea canephora HOM05D000307 ORTHO05D000166 4.7e-06 55.1 148 33.8
Nitab4.5_0000001g0140 Nicotiana tabacum HOM05D000307 ORTHO05D000166 4.7e-06 55.1 119 33.6
Cpa.g.sc34.39 Carica papaya HOM05D000307 ORTHO05D000166 6.1e-06 54.7 76 46.1
Dinv24518 Davidia involucrata HOM05D000307 ORTHO05D000166 6.1e-06 54.7 125 32.0
TAR636G2648 Trochodendron aralioides HOM05D000307 ORTHO05D000166 7.9e-06 54.3 123 33.3


User provided reference genes

Program Settings