Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c28389.1 Carica papaya HOM05D007383 ORTHO05D009254 1.4e-43 180.3 192 100.0
CSS0038327 Camellia sinensis var. sinensis HOM05D007383 ORTHO05D009254 9.1e-30 134.4 183 85.8
Atru.chr9.2397 Acer truncatum HOM05D007383 ORTHO05D009254 1.6e-26 123.6 71 81.7
Gohir.A06G179600 Gossypium hirsutum HOM05D007383 ORTHO05D009254 3.6e-26 122.5 71 78.9
Gohir.D06G186600 Gossypium hirsutum HOM05D007383 ORTHO05D009254 3.6e-26 122.5 71 78.9
Gorai.010G218900 Gossypium raimondii HOM05D007383 ORTHO05D009254 3.6e-26 122.5 71 78.9
Thecc.03G003000 Theobroma cacao HOM05D007383 ORTHO05D009254 3.6e-26 122.5 71 81.7
CANSAT64G1989 Cannabis sativa HOM05D007383 ORTHO05D009254 6.1e-26 121.7 71 77.5
Manes.14G070900 Manihot esculenta HOM05D007383 ORTHO05D009254 8.0e-26 121.3 71 80.3
QL02p081072 Quercus lobata HOM05D007383 ORTHO05D009254 1.4e-25 120.6 70 78.6
CiPaw.11G032700 Carya illinoinensis HOM05D007383 ORTHO05D009254 3.0e-25 119.4 71 78.9
QL10p027823 Quercus lobata HOM05D007383 ORTHO05D009254 5.2e-25 118.6 70 77.1
Ciclev10019863m.g Citrus clementina HOM05D007383 ORTHO05D009254 6.8e-25 118.2 71 77.5
CsaV3_1G008180 Cucumis sativus L. HOM05D007383 ORTHO05D009254 6.8e-25 118.2 71 76.1
vmacro14147 Vaccinium macrocarpon HOM05D007383 ORTHO05D009254 8.8e-25 117.9 71 76.1
MD06G1181800 Malus domestica HOM05D007383 ORTHO05D009254 1.2e-24 117.5 71 76.1
Aqoxy3G03101 Aquilegia oxysepala HOM05D007383 ORTHO05D009254 1.5e-24 117.1 71 76.1
Oeu022178.1 Olea europaea HOM05D007383 ORTHO05D009254 1.5e-24 117.1 71 76.1
RcHm_v2.0_Chr7g0179811 Rosa chinensis HOM05D007383 ORTHO05D009254 1.5e-24 117.1 71 76.1
MELO3C002235.2 Cucumis melo HOM05D007383 ORTHO05D009254 2.6e-24 116.3 71 76.1
Prupe.5G180100 Prunus persica HOM05D007383 ORTHO05D009254 2.6e-24 116.3 71 74.6
Cfa019063 Carpinus fangiana HOM05D007383 ORTHO05D009254 3.4e-24 115.9 68 76.5
Actinidia04954 Actinidia chinensis HOM05D007383 ORTHO05D009254 7.5e-24 114.8 71 74.6
Eucgr.B00333 Eucalyptus grandis HOM05D007383 ORTHO05D009254 7.5e-24 114.8 71 73.2
FAN13G1668 Fragaria x ananassa HOM05D007383 ORTHO05D009254 7.5e-24 114.8 71 74.6
Lsat_1_v5_gn_1_11261 Lactuca sativa HOM05D007383 ORTHO05D009254 7.5e-24 114.8 71 71.8
Sed0012253 Sechium edule HOM05D007383 ORTHO05D009254 9.8e-24 114.4 71 73.2
FvH4_5g16320 Fragaria vesca HOM05D007383 ORTHO05D009254 1.7e-23 113.6 71 73.2
FAN08G2883 Fragaria x ananassa HOM05D007383 ORTHO05D009254 1.7e-23 113.6 70 74.3
FAN18G1044 Fragaria x ananassa HOM05D007383 ORTHO05D009254 1.7e-23 113.6 71 73.2
Potri.015G070200 Populus trichocarpa HOM05D007383 ORTHO05D009254 1.7e-23 113.6 71 74.6
Cc04_g15920 Coffea canephora HOM05D007383 ORTHO05D009254 2.2e-23 113.2 71 73.2
Migut.G00440 Erythranthe guttata HOM05D007383 ORTHO05D009254 2.2e-23 113.2 71 71.8
FAN04G2952 Fragaria x ananassa HOM05D007383 ORTHO05D009254 2.2e-23 113.2 71 74.6
CSS0003541 Camellia sinensis var. sinensis HOM05D007383 ORTHO05D009254 3.7e-23 112.5 67 74.6
Lalb_Chr08g0236281 Lupinus albus HOM05D007383 ORTHO05D009254 3.7e-23 112.5 71 73.2
TWI15G0484 Tripterygium wilfordii HOM05D007383 ORTHO05D009254 4.8e-23 112.1 71 73.2
Sc04g0002110 Simmondsia chinensis HOM05D007383 ORTHO05D009254 6.3e-23 111.7 71 70.4
ECA247G2801 Erigeron canadensis HOM05D007383 ORTHO05D009254 1.1e-22 110.9 71 69.0
Nn3g16997 Nelumbo nucifera HOM05D007383 ORTHO05D009254 1.1e-22 110.9 71 73.2
MSTRG.21190 Avicennia marina HOM05D007383 ORTHO05D009254 1.4e-22 110.5 71 70.4
CAN.G853.23 Capsicum annuum HOM05D007383 ORTHO05D009254 1.4e-22 110.5 71 74.6
Solyc03g113750.3 Solanum lycopersicum HOM05D007383 ORTHO05D009254 1.4e-22 110.5 71 74.6
PGSC0003DMG401024469 Solanum tuberosum HOM05D007383 ORTHO05D009254 1.4e-22 110.5 71 74.6
arahy.Tifrunner.gnm1.ann1.91G2CV Arachis hypogaea HOM05D007383 ORTHO05D009254 1.8e-22 110.2 71 69.0
arahy.Tifrunner.gnm1.ann1.W479H1 Arachis hypogaea HOM05D007383 ORTHO05D009254 1.8e-22 110.2 71 69.0
arahy.Tifrunner.gnm1.ann1.Y1RBXN Arachis hypogaea HOM05D007383 ORTHO05D009254 1.8e-22 110.2 70 70.0
DCAR_016510 Daucus carota HOM05D007383 ORTHO05D009254 1.8e-22 110.2 71 71.8
HanXRQChr14g0455831 Helianthus annuus HOM05D007383 ORTHO05D009254 2.4e-22 109.8 71 71.8
Nitab4.5_0005005g0030 Nicotiana tabacum HOM05D007383 ORTHO05D009254 3.1e-22 109.4 70 72.9
Rhsim08G0167400 Rhododendron simsii HOM05D007383 ORTHO05D009254 3.1e-22 109.4 66 72.7
Sopen03g032800 Solanum pennellii HOM05D007383 ORTHO05D009254 3.1e-22 109.4 71 74.6
Glyma.12G085400 Glycine max HOM05D007383 ORTHO05D009254 4.1e-22 109.0 71 67.6
VMungo1127G1483 Vigna mungo HOM05D007383 ORTHO05D009254 5.4e-22 108.6 70 67.1
PGR083G0796 Punica granatum HOM05D007383 ORTHO05D009254 7.0e-22 108.2 71 70.4
Glyma.11G189200 Glycine max HOM05D007383 ORTHO05D009254 9.1e-22 107.8 71 67.6
Lj1g0016404 Lotus japonicus HOM05D007383 ORTHO05D009254 1.6e-21 107.1 71 69.0
COL.COLO4_21446 Corchorus olitorius HOM05D007383 ORTHO05D009254 2.7e-21 106.3 71 76.1
THA.LOC104803714 Tarenaya hassleriana HOM05D007383 ORTHO05D009254 2.7e-21 106.3 72 72.2
Phvul.011G090300 Phaseolus vulgaris HOM05D007383 ORTHO05D009254 4.5e-21 105.5 71 67.6
TAR629G0990 Trochodendron aralioides HOM05D007383 ORTHO05D009254 4.5e-21 105.5 71 69.0
TPR.G6852 Trifolium pratense HOM05D007383 ORTHO05D009254 2.3e-20 103.2 71 64.8
BcaNung06480 Brassica carinata HOM05D007383 ORTHO05D009254 2.9e-20 102.8 72 70.8
Aa31LG4G5110 Aethionema arabicum HOM05D007383 ORTHO05D009254 3.8e-20 102.4 72 68.1
AL2G34780 Arabidopsis lyrata HOM05D007383 ORTHO05D009254 3.8e-20 102.4 72 69.4
BolC6t39928H Brassica oleracea HOM05D007383 ORTHO05D009254 3.8e-20 102.4 72 70.8
Carub.0002s2169 Capsella rubella HOM05D007383 ORTHO05D009254 3.8e-20 102.4 72 69.4
BraA07t31598Z Brassica rapa HOM05D007383 ORTHO05D009254 5.0e-20 102.1 72 69.4
A07p40530 Brassica napus HOM05D007383 ORTHO05D009254 6.6e-20 101.7 72 69.4
Psat5g113680 Pisum sativum HOM05D007383 ORTHO05D009254 1.1e-19 100.9 71 64.8
Sp5g30040 Schrenkiella parvula HOM05D007383 ORTHO05D009254 1.1e-19 100.9 72 68.1
C06p48920 Brassica napus HOM05D007383 ORTHO05D009254 2.5e-19 99.8 72 69.4
Medtr3g078580 Medicago truncatula HOM05D007383 ORTHO05D009254 2.5e-19 99.8 71 64.8
ClCG01G014130 Citrullus lanatus HOM05D002622 ORTHO05D002837 3.3e-19 99.4 62 72.6
MBI03_g18671_MAGBIO Magnolia biondii HOM05D007383 ORTHO05D009254 3.3e-19 99.4 70 60.0
CDE10G1349 Ceratophyllum demersum HOM05D007383 ORTHO05D009254 5.5e-19 98.6 67 67.2
PSO832G2588 Papaver somniferum HOM05D007383 ORTHO05D009254 7.2e-19 98.2 71 63.4
SHI16834 Sapria himalayana HOM05D007383 ORTHO05D009254 2.1e-18 96.7 70 65.7
AUR62027012 Chenopodium quinoa HOM05D007383 ORTHO05D009254 2.8e-18 96.3 71 59.2
HanXRQChr02g0043781 Helianthus annuus HOM05D007383 ORTHO05D009254 6.1e-18 95.1 61 70.5
PSO591G0482 Papaver somniferum HOM05D007383 ORTHO05D009254 6.1e-18 95.1 71 60.6
Ca_16213_v3 Cicer arietinum L. HOM05D007383 ORTHO05D009254 8.0e-18 94.7 62 67.7
SGA_v2.0_scaffold196G40934 Striga asiatica HOM05D007383 ORTHO05D009254 8.0e-18 94.7 66 65.2
Zm00001eb250630 Zea mays HOM05D007383 ORTHO05D009254 5.7e-16 88.6 71 53.5
HPP92_007727 Vanilla planifolia HOM05D007383 ORTHO05D009254 2.8e-15 86.3 71 53.5
Duzib084G1098 Durio zibethinus HOM05D007383 ORTHO05D009254 6.3e-15 85.1 51 82.4
Os02g0679200 Oryza sativa ssp. japonica HOM05D007383 ORTHO05D009254 8.3e-15 84.7 71 49.3
SEGI_30418 Sequoiadendron giganteum HOM05D000424 ORTHO05D009254 1.1e-14 84.3 64 57.8
arahy.Tifrunner.gnm1.ann1.B46INW Arachis hypogaea HOM05D007383 ORTHO05D009254 1.4e-14 84.0 56 66.1
AUR62030852 Chenopodium quinoa HOM05D007383 ORTHO05D009254 5.4e-14 82.0 58 60.3
ATR0564G068 Amborella trichopoda HOM05D000424 ORTHO05D009254 2.7e-13 79.7 66 54.5
Sabra15G0094300 Salix brachista HOM05D007383 ORTHO05D009254 5.9e-13 78.6 47 74.5
Sabra15G0094600 Salix brachista HOM05D007383 ORTHO05D009254 5.9e-13 78.6 47 74.5
Peaxi162Scf00017g00227 Petunia axillaris HOM05D007383 ORTHO05D009254 8.6e-12 74.7 45 75.6
BcaC08g46924 Brassica carinata HOM05D007383 ORTHO05D009254 2.1e-10 70.1 43 72.1
Ah.01g024620 Amaranthus hybridus HOM05D007383 ORTHO05D009254 3.6e-10 69.3 48 60.4
Haze_07432 Corylus avellana HOM05D007383 ORTHO05D009254 2.3e-09 66.6 37 78.4
EL10Ac9g22193 Beta vulgaris HOM05D025815 ORTHO05D018419 2.6e-08 63.2 36 83.3
Dinv20703 Davidia involucrata HOM05D007383 ORTHO05D009254 6.4e-07 58.5 31 80.6
Cc06_g20550 Coffea canephora HOM05D007383 ORTHO05D009254 7.0e-06 55.1 30 80.0


User provided reference genes

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