Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c28186.1 Carica papaya HOM05D002996 ORTHO05D003536 1.8e-156 555.8 276 100.0
Nn4g24147 Nelumbo nucifera HOM05D002996 ORTHO05D003536 8.3e-101 370.9 196 92.3
Thecc.04G120500 Theobroma cacao HOM05D002996 ORTHO05D003536 9.2e-100 367.5 196 90.8
COL.COLO4_15723 Corchorus olitorius HOM05D002996 ORTHO05D003536 3.5e-99 365.5 196 90.8
Duzib211G0161 Durio zibethinus HOM05D002996 ORTHO05D003536 6.0e-99 364.8 196 91.3
Gohir.A08G052700 Gossypium hirsutum HOM05D002996 ORTHO05D003536 5.0e-98 361.7 196 89.8
Gohir.D08G062300 Gossypium hirsutum HOM05D002996 ORTHO05D003536 5.0e-98 361.7 196 89.8
Gorai.004G064500 Gossypium raimondii HOM05D002996 ORTHO05D003536 5.0e-98 361.7 196 89.8
Hund16206 Selenicereus undatus HOM05D002996 ORTHO05D003536 8.6e-98 360.9 196 88.8
GSVIVG01030858001 Vitis vinifera HOM05D002996 ORTHO05D003536 8.6e-98 360.9 196 90.3
MBI16_g14302_MAGBIO Magnolia biondii HOM05D002996 ORTHO05D003536 3.3e-97 359.0 196 90.3
Nitab4.5_0003360g0070 Nicotiana tabacum HOM05D002996 ORTHO05D003536 4.3e-97 358.6 197 88.8
Nitab4.5_0004399g0040 Nicotiana tabacum HOM05D002996 ORTHO05D003536 7.3e-97 357.8 197 88.8
EL10Ac2g04480 Beta vulgaris HOM05D002996 ORTHO05D003536 9.5e-97 357.5 197 89.3
Dinv14879 Davidia involucrata HOM05D002996 ORTHO05D003536 1.6e-96 356.7 196 88.3
THA.LOC104827237 Tarenaya hassleriana HOM05D002996 ORTHO05D003536 1.6e-96 356.7 196 89.3
CSS0002683 Camellia sinensis var. sinensis HOM05D002996 ORTHO05D003536 2.8e-96 355.9 197 88.3
TAR622G0566 Trochodendron aralioides HOM05D002996 ORTHO05D003536 4.7e-96 355.1 196 88.8
Sc10g0000820 Simmondsia chinensis HOM05D002996 ORTHO05D003536 6.2e-96 354.8 196 88.3
Manes.02G074800 Manihot esculenta HOM05D002996 ORTHO05D003536 1.1e-95 354.0 197 87.8
Manes.01G115900 Manihot esculenta HOM05D002996 ORTHO05D003536 1.4e-95 353.6 197 87.8
Thhalv10019951m.g Eutrema salsugineum HOM05D002996 ORTHO05D003536 1.8e-95 353.2 196 88.3
Potri.017G128300 Populus trichocarpa HOM05D002996 ORTHO05D003536 6.8e-95 351.3 197 87.8
Sp3g02390 Schrenkiella parvula HOM05D002996 ORTHO05D003536 8.9e-95 350.9 196 87.8
Haze_14227 Corylus avellana HOM05D002996 ORTHO05D003536 1.2e-94 350.5 198 88.4
Ah.16g101290 Amaranthus hybridus HOM05D002996 ORTHO05D003536 1.5e-94 350.1 196 87.2
AL3G13060 Arabidopsis lyrata HOM05D002996 ORTHO05D003536 1.5e-94 350.1 196 86.7
CAN.G625.86 Capsicum annuum HOM05D002996 ORTHO05D003536 1.5e-94 350.1 197 87.3
Sabra17G0107000 Salix brachista HOM05D002996 ORTHO05D003536 1.5e-94 350.1 197 87.8
CARHR077410 Cardamine hirsuta HOM05D002996 ORTHO05D003536 2.0e-94 349.7 196 86.2
Cc07_g08150 Coffea canephora HOM05D002996 ORTHO05D003536 2.0e-94 349.7 196 87.2
Aa31LG5G13900 Aethionema arabicum HOM05D002996 ORTHO05D003536 2.6e-94 349.4 196 86.2
MSTRG.3518 Avicennia marina HOM05D002996 ORTHO05D003536 4.4e-94 348.6 193 88.1
AT3G03380 Arabidopsis thaliana HOM05D002996 ORTHO05D003536 5.8e-94 348.2 196 86.2
CsaV3_3G021610 Cucumis sativus L. HOM05D002996 ORTHO05D003536 5.8e-94 348.2 269 69.9
TWI74G1665 Tripterygium wilfordii HOM05D002996 ORTHO05D003536 5.8e-94 348.2 197 86.8
TAR374G0579 Trochodendron aralioides HOM05D002996 ORTHO05D003536 5.8e-94 348.2 196 86.2
Carub.0003s0254 Capsella rubella HOM05D002996 ORTHO05D003536 7.5e-94 347.8 196 86.7
TWI77G0049 Tripterygium wilfordii HOM05D002996 ORTHO05D003536 7.5e-94 347.8 197 86.3
Duzib133G0038 Durio zibethinus HOM05D002996 ORTHO05D003536 1.3e-93 347.1 196 87.2
Cfa007838 Carpinus fangiana HOM05D002996 ORTHO05D003536 1.7e-93 346.7 198 87.9
ATR0053G010 Amborella trichopoda HOM05D002996 ORTHO05D003536 2.2e-93 346.3 196 87.8
BraA05t23122Z Brassica rapa HOM05D002996 ORTHO05D003536 2.2e-93 346.3 196 85.2
SGA_v2.0_scaffold13G06389 Striga asiatica HOM05D002996 ORTHO05D003536 2.2e-93 346.3 193 87.0
ClCG05G010970 Citrullus lanatus HOM05D002996 ORTHO05D003536 2.9e-93 345.9 197 85.8
Prupe.3G159400 Prunus persica HOM05D002996 ORTHO05D003536 2.9e-93 345.9 196 87.2
BcaC05g30533 Brassica carinata HOM05D002996 ORTHO05D003536 3.7e-93 345.5 196 85.2
A05p43840 Brassica napus HOM05D002996 ORTHO05D003536 3.7e-93 345.5 196 85.2
MELO3C020288.2 Cucumis melo HOM05D002996 ORTHO05D003536 4.9e-93 345.1 269 69.9
C05p63430 Brassica napus HOM05D002996 ORTHO05D003536 1.1e-92 344.0 196 84.7
BolC5t35007H Brassica oleracea HOM05D002996 ORTHO05D003536 1.1e-92 344.0 196 84.7
PGR004G1736 Punica granatum HOM05D002996 ORTHO05D003536 1.4e-92 343.6 202 86.1
Sopen02g036030 Solanum pennellii HOM05D002996 ORTHO05D003536 1.9e-92 343.2 197 85.3
Solyc02g091410.3 Solanum lycopersicum HOM05D002996 ORTHO05D003536 3.2e-92 342.4 197 85.3
BcaC05g30278 Brassica carinata HOM05D002996 ORTHO05D003536 5.4e-92 341.7 197 85.3
Ciclev10010941m.g Citrus clementina HOM05D002996 ORTHO05D003536 5.4e-92 341.7 191 87.4
AUR62023190 Chenopodium quinoa HOM05D002996 ORTHO05D003536 7.1e-92 341.3 197 85.3
AUR62023237 Chenopodium quinoa HOM05D002996 ORTHO05D003536 7.1e-92 341.3 197 85.3
Migut.L00466 Erythranthe guttata HOM05D002996 ORTHO05D003536 7.1e-92 341.3 193 86.0
MD17G1256700 Malus domestica HOM05D002996 ORTHO05D003536 9.2e-92 340.9 196 86.2
Oeu047419.3 Olea europaea HOM05D002996 ORTHO05D003536 9.2e-92 340.9 193 86.5
Actinidia17659 Actinidia chinensis HOM05D002996 ORTHO05D003536 1.2e-91 340.5 197 85.3
Gohir.A11G162100 Gossypium hirsutum HOM05D002996 ORTHO05D003536 2.7e-91 339.3 196 84.2
Lsat_1_v5_gn_2_81521 Lactuca sativa HOM05D002996 ORTHO05D003536 2.7e-91 339.3 196 85.7
Gohir.D11G168300 Gossypium hirsutum HOM05D002996 ORTHO05D003536 4.6e-91 338.6 196 83.7
Gorai.007G179800 Gossypium raimondii HOM05D002996 ORTHO05D003536 4.6e-91 338.6 196 83.7
MSTRG.15319 Avicennia marina HOM05D002996 ORTHO05D003536 6.0e-91 338.2 193 86.5
Sed0026936 Sechium edule HOM05D002996 ORTHO05D003536 7.8e-91 337.8 197 84.3
Glyma.18G039000 Glycine max HOM05D002996 ORTHO05D003536 1.3e-90 337.0 196 83.7
FvH4_5g27890 Fragaria vesca HOM05D002996 ORTHO05D003536 1.7e-90 336.7 199 84.9
FAN18G1791 Fragaria x ananassa HOM05D002996 ORTHO05D003536 1.7e-90 336.7 199 84.9
Glyma.11G218000 Glycine max HOM05D002996 ORTHO05D003536 1.7e-90 336.7 196 84.2
CANSAT78G2389 Cannabis sativa HOM05D002996 ORTHO05D003536 2.3e-90 336.3 196 85.2
Phvul.001G231700 Phaseolus vulgaris HOM05D002996 ORTHO05D003536 2.3e-90 336.3 196 83.7
CSS0016713 Camellia sinensis var. sinensis HOM05D002996 ORTHO05D003536 5.1e-90 335.1 197 84.8
CDE10G0501 Ceratophyllum demersum HOM05D002996 ORTHO05D003536 6.6e-90 334.7 196 84.7
Lj6g0006116 Lotus japonicus HOM05D002996 ORTHO05D003536 6.6e-90 334.7 196 83.7
Dinv19011 Davidia involucrata HOM05D002996 ORTHO05D003536 8.6e-90 334.3 180 89.4
Oeu000903.1 Olea europaea HOM05D002996 ORTHO05D003536 1.9e-89 333.2 193 84.5
HanXRQChr07g0193641 Helianthus annuus HOM05D002996 ORTHO05D003536 2.5e-89 332.8 180 90.0
Aqoxy3G00131_Aqoxy3G00132 Aquilegia oxysepala HOM05D002996 ORTHO05D003536 5.6e-89 331.6 197 83.2
Eucgr.F02825 Eucalyptus grandis HOM05D002996 ORTHO05D003536 7.3e-89 331.3 201 83.6
Rhsim08G0086100 Rhododendron simsii HOM05D002996 ORTHO05D003536 9.5e-89 330.9 238 71.8
Lalb_Chr15g0084771 Lupinus albus HOM05D002996 ORTHO05D003536 1.2e-88 330.5 199 82.4
arahy.Tifrunner.gnm1.ann1.RDL55E Arachis hypogaea HOM05D002996 ORTHO05D003536 1.6e-88 330.1 202 82.2
QL11p004079 Quercus lobata HOM05D002996 ORTHO05D003536 2.8e-88 329.3 198 82.3
RcHm_v2.0_Chr7g0220101 Rosa chinensis HOM05D002996 ORTHO05D003536 4.7e-88 328.6 197 84.8
FAN08G1319 Fragaria x ananassa HOM05D002996 ORTHO05D003536 6.2e-88 328.2 200 82.0
BraA01t04583Z Brassica rapa HOM05D002996 ORTHO05D003536 1.1e-87 327.4 196 83.2
Lsat_1_v5_gn_4_154680 Lactuca sativa HOM05D002996 ORTHO05D003536 1.1e-87 327.4 179 88.8
A06p26370 Brassica napus HOM05D002996 ORTHO05D003536 5.2e-87 325.1 196 82.7
BNapus_Darmor_BZH_scaffold_78p00120 Brassica napus HOM05D002996 ORTHO05D003536 5.2e-87 325.1 196 82.7
Ca_08163_v3 Cicer arietinum L. HOM05D002996 ORTHO05D003536 1.2e-86 323.9 196 82.7
Ca_17109_v3 Cicer arietinum L. HOM05D002996 ORTHO05D003536 1.2e-86 323.9 196 82.7
Atru.chr1.1814 Acer truncatum HOM05D002996 ORTHO05D003536 3.4e-86 322.4 207 80.2
Sopen03g007520 Solanum pennellii HOM05D002996 ORTHO05D003536 5.8e-86 321.6 187 84.5
Solyc03g043660.3 Solanum lycopersicum HOM05D002996 ORTHO05D003536 1.3e-85 320.5 187 84.0
Medtr3g067690 Medicago truncatula HOM05D002996 ORTHO05D003536 2.2e-85 319.7 196 81.1
VMungo1383G2581 Vigna mungo HOM05D002996 ORTHO05D003536 2.2e-85 319.7 171 88.9
Psat5g122480 Pisum sativum HOM05D002996 ORTHO05D003536 2.9e-85 319.3 196 80.1
TPR.G27148 Trifolium pratense HOM05D002996 ORTHO05D003536 3.8e-85 318.9 196 80.6
arahy.Tifrunner.gnm1.ann1.GD0F1M Arachis hypogaea HOM05D002996 ORTHO05D003536 8.4e-85 317.8 223 74.4
BcaC09g47743 Brassica carinata HOM05D002996 ORTHO05D003536 5.4e-84 315.1 196 81.1
BolC1t05834H Brassica oleracea HOM05D002996 ORTHO05D003536 5.4e-84 315.1 196 81.1
BNapus_Darmor_BZH_scaffold_162p00130 Brassica napus HOM05D002996 ORTHO05D003536 7.1e-84 314.7 196 80.6
PSO017G4487 Papaver somniferum HOM05D002996 ORTHO05D003536 9.2e-84 314.3 196 82.7
PSO478G4946 Papaver somniferum HOM05D002996 ORTHO05D003536 9.2e-84 314.3 196 82.7
Peaxi162Scf00003g00013 Petunia axillaris HOM05D002996 ORTHO05D003536 2.7e-83 312.8 187 84.5
CAN.G11.11 Capsicum annuum HOM05D002996 ORTHO05D003536 1.3e-82 310.5 178 86.0
HanXRQChr09g0262271 Helianthus annuus HOM05D002996 ORTHO05D003536 1.1e-81 307.4 177 84.2
vmacro18050 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 1.9e-81 306.6 198 80.8
ECA232G3169 Erigeron canadensis HOM05D002996 ORTHO05D003536 7.3e-81 304.7 176 85.8
CsaV3_1G027780 Cucumis sativus L. HOM05D002996 ORTHO05D003536 2.8e-80 302.8 197 77.2
Peaxi162Scf00118g00223 Petunia axillaris HOM05D002996 ORTHO05D003536 4.7e-80 302.0 177 84.2
Pp3c2_7790 Physcomitrium patens HOM05D002996 ORTHO05D003536 1.4e-79 300.4 194 76.3
Rhsim10G0079400 Rhododendron simsii HOM05D002996 ORTHO05D003536 1.4e-79 300.4 217 71.0
Migut.H00264 Erythranthe guttata HOM05D002996 ORTHO05D003536 5.8e-78 295.0 189 77.2
Rhsim10G0079500 Rhododendron simsii HOM05D002996 ORTHO05D003536 7.6e-78 294.7 176 81.8
ECA238G4747 Erigeron canadensis HOM05D002996 ORTHO05D003536 9.9e-78 294.3 160 88.8
Medtr3g067695 Medicago truncatula HOM05D002996 ORTHO05D003536 1.3e-77 293.9 197 75.1
Mapoly0003s0272 Marchantia polymorpha HOM05D002996 ORTHO05D003536 2.2e-77 293.1 180 82.2
SEGI_40820 Sequoiadendron giganteum HOM05D002996 ORTHO05D003536 3.8e-77 292.4 178 80.9
Manes.01G116000 Manihot esculenta HOM05D002996 ORTHO05D003536 1.4e-76 290.4 193 73.1
Pp3c1_28480 Physcomitrium patens HOM05D002996 ORTHO05D003536 4.6e-75 285.4 191 75.9
PSO339G5742 Papaver somniferum HOM05D002996 ORTHO05D003536 5.1e-74 282.0 171 81.3
PGSC0003DMG402030647 Solanum tuberosum HOM05D002996 ORTHO05D003536 3.3e-73 279.3 166 83.1
SMO361G0084 Selaginella moellendorffii HOM05D002996 ORTHO05D003536 8.1e-72 274.6 160 81.9
PSO170G1396 Papaver somniferum HOM05D002996 ORTHO05D003536 1.5e-70 270.4 165 79.4
Sabra04G0059000 Salix brachista HOM05D002996 ORTHO05D003536 7.6e-70 268.1 196 70.9
PSO407G0242 Papaver somniferum HOM05D002996 ORTHO05D003536 9.9e-70 267.7 165 79.4
CSS0044512 Camellia sinensis var. sinensis HOM05D002996 ORTHO05D003536 4.9e-69 265.4 166 80.7
Potri.004G088600 Populus trichocarpa HOM05D002996 ORTHO05D003536 8.4e-69 264.6 180 72.8
HanXRQChr09g0262281 Helianthus annuus HOM05D002996 ORTHO05D003536 1.9e-68 263.5 150 86.0
PSO407G0207 Papaver somniferum HOM05D002996 ORTHO05D003536 6.7e-66 255.0 189 67.7
Potri.004G088700 Populus trichocarpa HOM05D002996 ORTHO05D003536 4.3e-65 252.3 167 72.5
CDE10G1224 Ceratophyllum demersum HOM05D002996 ORTHO05D003536 4.8e-64 248.8 128 91.4
Cre03.g180650 Chlamydomonas reinhardtii HOM05D002996 ORTHO05D003536 5.3e-63 245.4 169 67.5
Sabra04G0059100 Salix brachista HOM05D002996 ORTHO05D003536 2.7e-59 233.0 187 62.6
vmacro05508 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 2.3e-58 229.9 160 70.0
vmacro05511 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 2.3e-58 229.9 291 47.1
SalBow1G7030 Salvia bowleyana HOM05D002996 ORTHO05D003536 4.8e-56 222.2 192 63.0
MCO10G011 Micromonas commoda HOM05D002996 ORTHO05D003536 4.0e-55 219.2 155 65.8
Zm00001eb252510 Zea mays HOM05D002996 ORTHO05D003536 2.1e-51 206.8 174 64.9
CiPaw.03G068900 Carya illinoinensis HOM05D002996 ORTHO05D003536 3.9e-50 202.6 122 85.2
Hma1.2p1_0832F.1_g225610 Hydrangea macrophylla HOM05D002996 ORTHO05D003536 3.7e-48 196.1 120 80.0
DCAR_010738 Daucus carota HOM05D002996 ORTHO05D003536 3.1e-47 193.0 116 81.0
TPR.G27497 Trifolium pratense HOM05D002996 ORTHO05D003536 5.9e-46 188.7 126 72.2
Cfa025176 Carpinus fangiana HOM05D002996 ORTHO05D003536 2.5e-44 183.3 171 50.3
Zm00001eb064060 Zea mays HOM05D002996 ORTHO05D003536 1.6e-43 180.6 103 84.5
Zm00001eb218380 Zea mays HOM05D002996 ORTHO05D003536 7.9e-43 178.3 103 83.5
Nitab4.5_0002366g0060 Nicotiana tabacum HOM05D002996 ORTHO05D003536 2.5e-41 173.3 102 86.3
FAN04G0036 Fragaria x ananassa HOM05D002996 ORTHO05D003536 7.7e-38 161.8 106 80.2
CDE11G1125 Ceratophyllum demersum HOM05D002996 ORTHO05D003536 7.2e-36 155.2 92 84.8
Lj2C435G4 Lonicera japonica HOM05D002996 ORTHO05D003536 9.4e-36 154.8 96 81.2
Lsat_1_v5_gn_1_126760 Lactuca sativa HOM05D002996 ORTHO05D004698 1.8e-34 150.6 97 75.3
GSVIVG01037949001 Vitis vinifera HOM05D002996 ORTHO05D003536 1.3e-32 144.4 105 72.4
vmacro05503 Vaccinium macrocarpon HOM05D002996 ORTHO05D004756 1.9e-28 130.6 85 74.1
Lj2C435G10 Lonicera japonica HOM05D002996 ORTHO05D003536 5.5e-28 129.0 64 95.3
Nitab4.5_0000465g0040 Nicotiana tabacum HOM05D002996 ORTHO05D003536 9.4e-28 128.3 76 86.8
vmacro05504 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 8.8e-26 121.7 96 65.6
Os02g0712000 Oryza sativa ssp. japonica HOM05D002996 ORTHO05D003536 3.3e-25 119.8 64 87.5
Zm00001eb125510 Zea mays HOM05D002996 ORTHO05D003536 1.7e-24 117.5 70 77.1
Nitab4.5_0002366g0050 Nicotiana tabacum HOM05D002996 ORTHO05D003536 2.8e-24 116.7 61 90.2
HanXRQChr06g0182761 Helianthus annuus HOM05D002996 ORTHO05D003536 1.0e-18 98.2 56 82.1
Manes.04G143783 Manihot esculenta HOM05D002996 ORTHO05D003536 1.0e-18 98.2 90 60.0
Nitab4.5_0008435g0040 Nicotiana tabacum HOM05D002996 ORTHO05D025899 7.2e-12 75.5 80 50.0
Nitab4.5_0026266g0010 Nicotiana tabacum HOM05D002996 ORTHO05D025899 1.2e-11 74.7 80 50.0
PGSC0003DMG400014175 Solanum tuberosum HOM05D002996 ORTHO05D003536 1.2e-11 74.7 41 85.4
DCAR_010737 Daucus carota HOM05D002996 ORTHO05D003536 6.1e-11 72.4 33 97.0
Nitab4.5_0011266g0010 Nicotiana tabacum HOM05D002996 ORTHO05D025899 1.4e-10 71.2 49 67.3
Solyc01g056910.1 Solanum lycopersicum HOM05D002996 ORTHO05D003536 5.2e-10 69.3 42 76.2
Zm00001eb156170 Zea mays HOM05D002996 ORTHO05D025899 4.8e-08 62.8 39 74.4
Zm00001eb156180 Zea mays HOM05D002996 ORTHO05D004756 4.8e-08 62.8 39 74.4
TPR.G1005 Trifolium pratense HOM05D002996 ORTHO05D003536 1.6e-06 57.8 32 78.1


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