Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c27001.3 Carica papaya HOM05D004607 ORTHO05D005836 1.1e-93 346.7 180 100.0
RcHm_v2.0_Chr2g0097211 Rosa chinensis HOM05D004607 ORTHO05D005836 2.0e-63 246.1 179 71.5
MD02G1117000 Malus domestica HOM05D004607 ORTHO05D005836 2.9e-62 242.3 179 70.9
MD02G1116800 Malus domestica HOM05D004607 ORTHO05D005836 8.5e-62 240.7 179 70.9
Prupe.7G182100 Prunus persica HOM05D004607 ORTHO05D005836 3.2e-61 238.8 179 70.4
FAN28G2666 Fragaria x ananassa HOM05D004607 ORTHO05D005836 2.7e-60 235.7 179 69.3
CiPaw.08G181500 Carya illinoinensis HOM05D004607 ORTHO05D005836 1.0e-59 233.8 177 71.8
Potri.005G101300 Populus trichocarpa HOM05D004607 ORTHO05D005836 2.3e-59 232.6 180 70.6
TWI09G0436 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 3.3e-58 228.8 172 68.6
FvH4_1g10350 Fragaria vesca HOM05D004607 ORTHO05D005836 1.3e-57 226.9 174 68.4
Dinv40187 Davidia involucrata HOM05D004607 ORTHO05D005836 1.1e-56 223.8 169 71.0
CsaV3_3G000280 Cucumis sativus L. HOM05D004607 ORTHO05D005836 3.1e-56 222.2 177 64.4
Hma1.2p1_0300F.1_g118020 Hydrangea macrophylla HOM05D004607 ORTHO05D005836 1.5e-55 219.9 172 65.7
TWI73G0051 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 1.5e-55 219.9 172 68.6
CANSAT80G1685 Cannabis sativa HOM05D004607 ORTHO05D005836 3.4e-55 218.8 178 66.9
CANSAT80G2088 Cannabis sativa HOM05D004607 ORTHO05D005836 3.4e-55 218.8 178 66.9
Carub.0007s2507 Capsella rubella HOM05D004607 ORTHO05D005836 5.9e-55 218.0 171 65.5
Eucgr.I00568 Eucalyptus grandis HOM05D004607 ORTHO05D005836 2.2e-54 216.1 175 64.0
Cc07_g11810 Coffea canephora HOM05D004607 ORTHO05D005836 3.8e-54 215.3 171 65.5
Dinv08165 Davidia involucrata HOM05D004607 ORTHO05D005836 3.8e-54 215.3 169 67.5
Actinidia17362 Actinidia chinensis HOM05D004607 ORTHO05D005836 5.0e-54 214.9 169 66.3
CARHR222820 Cardamine hirsuta HOM05D004607 ORTHO05D005836 5.0e-54 214.9 171 63.7
PGR042G1958 Punica granatum HOM05D004607 ORTHO05D005836 5.0e-54 214.9 172 66.3
AL7G38550 Arabidopsis lyrata HOM05D004607 ORTHO05D005836 6.5e-54 214.5 171 64.9
Thhalv10026376m.g Eutrema salsugineum HOM05D004607 ORTHO05D005836 1.1e-53 213.8 163 66.3
CSS0013050 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 3.2e-53 212.2 169 65.1
Sp7g14990 Schrenkiella parvula HOM05D004607 ORTHO05D005836 4.2e-53 211.8 171 63.2
CSS0035278 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 5.5e-53 211.5 169 65.1
FAN26G2101 Fragaria x ananassa HOM05D004607 ORTHO05D005836 5.5e-53 211.5 205 58.5
CiPaw.07G003100 Carya illinoinensis HOM05D004607 ORTHO05D005836 9.4e-53 210.7 177 63.3
Aa31LG2G12510 Aethionema arabicum HOM05D004607 ORTHO05D005836 1.6e-52 209.9 171 60.8
THA.LOC104819160 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 2.1e-52 209.5 170 60.6
BolC8t48369H Brassica oleracea HOM05D004607 ORTHO05D005836 3.6e-52 208.8 171 62.0
BraA08t33239Z Brassica rapa HOM05D004607 ORTHO05D005836 3.6e-52 208.8 171 62.0
AT4G16444 Arabidopsis thaliana HOM05D004607 ORTHO05D005836 4.7e-52 208.4 171 63.7
Haze_03657 Corylus avellana HOM05D004607 ORTHO05D005836 4.7e-52 208.4 154 70.1
Haze_03663 Corylus avellana HOM05D004607 ORTHO05D005836 4.7e-52 208.4 154 70.1
Ca_02856_v3 Cicer arietinum L. HOM05D004607 ORTHO05D005836 6.1e-52 208.0 177 60.5
BolC7t45311H Brassica oleracea HOM05D004607 ORTHO05D005836 1.8e-51 206.5 173 61.3
Actinidia22900 Actinidia chinensis HOM05D004607 ORTHO05D005836 8.8e-51 204.1 169 64.5
Solyc02g082710.3 Solanum lycopersicum HOM05D004607 ORTHO05D005836 8.8e-51 204.1 171 62.0
C07p47890 Brassica napus HOM05D004607 ORTHO05D005836 1.5e-50 203.4 174 61.5
Haze_04009 Corylus avellana HOM05D004607 ORTHO05D005836 1.5e-50 203.4 154 68.2
A03p49830 Brassica napus HOM05D004607 ORTHO05D005836 2.0e-50 203.0 175 61.1
BraA03t14078Z Brassica rapa HOM05D004607 ORTHO05D005836 2.0e-50 203.0 175 61.1
Glyma.09G198400 Glycine max HOM05D004607 ORTHO05D005836 2.6e-50 202.6 177 58.8
Sopen02g027460 Solanum pennellii HOM05D004607 ORTHO05D005836 4.4e-50 201.8 171 61.4
Thecc.01G005800 Theobroma cacao HOM05D004607 ORTHO05D005836 4.4e-50 201.8 154 67.5
FvH4_1g10370 Fragaria vesca HOM05D004607 ORTHO05D005836 5.7e-50 201.4 181 61.9
Peaxi162Scf01051g00133 Petunia axillaris HOM05D004607 ORTHO05D005836 5.7e-50 201.4 172 64.5
Medtr8g073600 Medicago truncatula HOM05D004607 ORTHO05D005836 1.3e-49 200.3 169 61.5
Gorai.010G212400 Gossypium raimondii HOM05D004607 ORTHO05D005836 2.2e-49 199.5 165 63.0
Migut.C01149 Erythranthe guttata HOM05D004607 ORTHO05D005836 2.8e-49 199.1 170 60.6
THA.LOC104826422 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 3.7e-49 198.7 176 59.7
GSVIVG01026644001 Vitis vinifera HOM05D004607 ORTHO05D005836 8.2e-49 197.6 163 65.6
Migut.G00971 Erythranthe guttata HOM05D004607 ORTHO05D005836 1.4e-48 196.8 170 60.0
Migut.K01195 Erythranthe guttata HOM05D004607 ORTHO05D005836 1.4e-48 196.8 170 60.0
Ciclev10016602m.g Citrus clementina HOM05D004607 ORTHO05D005836 1.8e-48 196.4 158 65.2
Lalb_Chr05g0229661 Lupinus albus HOM05D004607 ORTHO05D005836 2.4e-48 196.1 177 60.5
A08p12190 Brassica napus HOM05D004607 ORTHO05D005836 5.3e-48 194.9 196 54.1
CAN.G1238.9 Capsicum annuum HOM05D004607 ORTHO05D005836 5.3e-48 194.9 171 60.2
Nitab4.5_0000467g0060 Nicotiana tabacum HOM05D004607 ORTHO05D005836 5.3e-48 194.9 169 59.2
BcaC07g37988 Brassica carinata HOM05D004607 ORTHO05D005836 7.0e-48 194.5 172 59.9
Nitab4.5_0011694g0010 Nicotiana tabacum HOM05D004607 ORTHO05D005836 9.1e-48 194.1 167 63.5
Duzib187G1597 Durio zibethinus HOM05D004607 ORTHO05D005836 1.6e-47 193.4 167 63.5
Lsat_1_v5_gn_3_68061 Lactuca sativa HOM05D004607 ORTHO05D005836 1.6e-47 193.4 170 58.2
Lj4g0003075 Lotus japonicus HOM05D004607 ORTHO05D005836 4.5e-47 191.8 177 57.1
MSTRG.1461 Avicennia marina HOM05D004607 ORTHO05D005836 1.3e-46 190.3 172 59.9
Lalb_Chr09g0324751 Lupinus albus HOM05D004607 ORTHO05D005836 1.3e-46 190.3 174 59.8
HanXRQChr16g0531851 Helianthus annuus HOM05D004607 ORTHO05D005836 5.0e-46 188.3 170 55.9
ClCG10G000250 Citrullus lanatus HOM05D004607 ORTHO05D005836 1.5e-45 186.8 155 63.2
MBI11_g22240_MAGBIO Magnolia biondii HOM05D004607 ORTHO05D005836 3.2e-45 185.7 175 58.3
Nn2g14487 Nelumbo nucifera HOM05D004607 ORTHO05D005836 1.6e-44 183.3 169 59.2
Solyc02g038815.1 Solanum lycopersicum HOM05D004607 ORTHO05D005836 4.7e-44 181.8 161 57.8
vmacro23502 Vaccinium macrocarpon HOM05D004607 ORTHO05D005836 4.7e-44 181.8 155 61.9
Sopen02g012590 Solanum pennellii HOM05D004607 ORTHO05D005836 8.0e-44 181.0 161 57.8
Lalb_Chr05g0214781 Lupinus albus HOM05D004607 ORTHO05D005836 1.4e-43 180.3 174 58.0
Nitab4.5_0000702g0180 Nicotiana tabacum HOM05D004607 ORTHO05D005836 2.3e-43 179.5 174 58.0
ECA246G3880 Erigeron canadensis HOM05D004607 ORTHO05D005836 1.2e-42 177.2 168 54.2
Phvul.003G269900 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 1.2e-42 177.2 172 54.7
Sabra05G0083700 Salix brachista HOM05D004607 ORTHO05D005836 2.6e-42 176.0 140 67.9
PGSC0003DMG400001520 Solanum tuberosum HOM05D004607 ORTHO05D005836 1.7e-41 173.3 178 53.9
Atru.chr8.743 Acer truncatum HOM05D004607 ORTHO05D005836 2.2e-41 172.9 141 65.2
Glyma.11G085750 Glycine max HOM05D004607 ORTHO05D005836 3.7e-41 172.2 172 57.0
HanXRQChr09g0259831 Helianthus annuus HOM05D004607 ORTHO05D005836 3.7e-41 172.2 160 56.2
Glyma.01G158900 Glycine max HOM05D004607 ORTHO05D005836 4.8e-41 171.8 174 56.9
Psat4g104720 Pisum sativum HOM05D004607 ORTHO05D026060 4.8e-41 171.8 166 56.0
Duzib264G0749 Durio zibethinus HOM05D004607 ORTHO05D005836 6.3e-41 171.4 138 64.5
ATR0807G168 Amborella trichopoda HOM05D004607 ORTHO05D005836 1.1e-40 170.6 167 55.1
BcaNung00194 Brassica carinata HOM05D004607 ORTHO05D005836 1.4e-40 170.2 169 56.8
Sed0016741 Sechium edule HOM05D004607 ORTHO05D005836 2.4e-40 169.5 130 67.7
Manes.14G160966 Manihot esculenta HOM05D004607 ORTHO05D005836 3.1e-40 169.1 177 52.0
PSO761G0125 Papaver somniferum HOM05D004607 ORTHO05D005836 3.1e-40 169.1 172 52.9
PSO210G1290 Papaver somniferum HOM05D004607 ORTHO05D005836 4.1e-40 168.7 172 52.3
Sc16g0000240 Simmondsia chinensis HOM05D004607 ORTHO05D005836 4.1e-40 168.7 153 57.5
Lj2g0013322 Lotus japonicus HOM05D004607 ORTHO05D005836 7.0e-40 167.9 176 52.8
unitig_26.g9912 Utricularia gibba HOM05D004607 ORTHO05D005836 1.6e-39 166.8 170 53.5
arahy.Tifrunner.gnm1.ann1.322DBQ Arachis hypogaea HOM05D004607 ORTHO05D005836 3.5e-39 165.6 174 50.6
arahy.Tifrunner.gnm1.ann1.WAU4HL Arachis hypogaea HOM05D004607 ORTHO05D005836 3.5e-39 165.6 174 50.6
TAR628G0874 Trochodendron aralioides HOM05D004607 ORTHO05D005836 4.5e-39 165.2 153 58.8
Psat0s2561g0240 Pisum sativum HOM05D004607 ORTHO05D005836 1.0e-38 164.1 175 52.0
COL.COLO4_13415 Corchorus olitorius HOM05D004607 ORTHO05D005836 2.2e-38 162.9 143 65.0
MD15G1231800 Malus domestica HOM05D004607 ORTHO05D005836 2.9e-38 162.5 279 39.8
Aqoxy5G01013 Aquilegia oxysepala HOM05D004607 ORTHO05D005836 5.0e-38 161.8 152 56.6
SGA_v2.0_scaffold52G18984 Striga asiatica HOM05D004607 ORTHO05D005836 1.5e-37 160.2 149 55.7
TPR.G33861 Trifolium pratense HOM05D004607 ORTHO05D005836 2.5e-37 159.5 176 50.6
Phvul.002G116550 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 5.5e-37 158.3 175 50.9
SalBow7G2290 Salvia bowleyana HOM05D004607 ORTHO05D005836 7.2e-37 157.9 204 48.5
Migut.M00637 Erythranthe guttata HOM05D004607 ORTHO05D005836 9.4e-37 157.5 131 61.8
Os06g0198700 Oryza sativa ssp. japonica HOM05D004607 ORTHO05D005836 1.0e-35 154.1 163 50.3
SalBow7G4137 Salvia bowleyana HOM05D004607 ORTHO05D005836 1.8e-35 153.3 212 46.2
TPR.G21990 Trifolium pratense HOM05D004607 ORTHO05D005836 3.0e-35 152.5 174 48.3
AUR62031422 Chenopodium quinoa HOM05D004607 ORTHO05D005836 6.8e-35 151.4 146 56.2
Zm00001eb320900 Zea mays HOM05D004607 ORTHO05D005836 8.8e-35 151.0 163 50.9
Lsat_1_v5_gn_8_112021 Lactuca sativa HOM05D000005 ORTHO05D000012 1.2e-34 150.6 134 58.2
SalBow7G0705 Salvia bowleyana HOM05D004607 ORTHO05D005836 1.2e-34 150.6 212 45.8
CDE05G3414 Ceratophyllum demersum HOM05D004607 ORTHO05D005836 2.6e-34 149.4 141 57.4
Zm00001eb373950 Zea mays HOM05D004607 ORTHO05D005836 2.6e-34 149.4 163 49.7
CDE05G1839 Ceratophyllum demersum HOM05D001594 ORTHO05D006997 4.4e-34 148.7 185 48.6
HPP92_002453 Vanilla planifolia HOM05D004607 ORTHO05D005836 9.8e-34 147.5 171 49.7
EL10Ac3g05419 Beta vulgaris HOM05D004607 ORTHO05D005836 2.2e-33 146.4 147 54.4
Migut.N00197 Erythranthe guttata HOM05D004607 ORTHO05D005836 3.7e-33 145.6 155 52.9
AUR62021120 Chenopodium quinoa HOM05D004607 ORTHO05D005836 7.0e-32 141.4 155 52.9
Nitab4.5_0001365g0040 Nicotiana tabacum HOM05D004607 ORTHO05D005836 2.7e-31 139.4 152 50.7
unitig_749.g13934 Utricularia gibba HOM05D004607 ORTHO05D005836 7.2e-29 131.3 135 52.6
CSS0045229 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 2.8e-28 129.4 169 47.3
QL06p052929 Quercus lobata HOM05D004607 ORTHO05D005836 1.0e-27 127.5 89 66.3
Hund00045 Selenicereus undatus HOM05D004607 ORTHO05D005836 1.8e-27 126.7 165 44.2
TAR376G0723 Trochodendron aralioides HOM05D004607 ORTHO05D005836 6.8e-27 124.8 113 61.1
ECA232G4775 Erigeron canadensis HOM05D004607 ORTHO05D005836 3.7e-25 119.0 129 50.4
Duzib147G0723 Durio zibethinus HOM05D004607 ORTHO05D005836 6.3e-25 118.2 87 72.4
SGA_v2.0_scaffold24G10477 Striga asiatica HOM05D004607 ORTHO05D005836 1.4e-24 117.1 169 41.4
MELO3C013722.2 Cucumis melo HOM05D004607 ORTHO05D005836 4.1e-24 115.5 90 66.7
Rhsim10G0196300 Rhododendron simsii HOM05D004607 ORTHO05D005836 4.1e-24 115.5 108 59.3
QL06p052933 Quercus lobata HOM05D004607 ORTHO05D005836 5.4e-24 115.2 91 74.7
Cpa.g.sc117.83 Carica papaya HOM05D004607 ORTHO05D005836 5.9e-23 111.7 66 89.4
Peaxi162Scf00580g00027 Petunia axillaris HOM05D004607 ORTHO05D005836 2.9e-22 109.4 161 44.1
PGSC0003DMG400017476 Solanum tuberosum HOM05D004607 ORTHO05D005836 5.6e-21 105.1 77 58.4
Gohir.D06G180900 Gossypium hirsutum HOM05D004607 ORTHO05D005836 1.2e-20 104.0 81 67.9
CAN.G328.18 Capsicum annuum HOM05D004607 ORTHO05D005836 2.1e-20 103.2 91 56.0
Gohir.A06G172006 Gossypium hirsutum HOM05D004607 ORTHO05D005836 1.0e-19 100.9 81 65.4
FAN23G1441 Fragaria x ananassa HOM05D004607 ORTHO05D005836 1.4e-19 100.5 83 67.5
Glyma.16G116500 Glycine max HOM05D004607 ORTHO05D005836 5.7e-18 95.1 94 57.4
Mapoly0007s0238 Marchantia polymorpha HOM05D004607 ORTHO05D005836 5.7e-18 95.1 165 37.6
VMungo1215G0163 Vigna mungo HOM05D004607 ORTHO05D005836 3.2e-16 89.4 86 62.8
Rhsim10G0196100 Rhododendron simsii HOM05D004607 ORTHO05D005836 9.2e-16 87.8 109 49.5
Pp3c7_8860 Physcomitrium patens HOM05D004607 ORTHO05D005836 5.9e-15 85.1 164 33.5
AagrBONN_evm.TU.Sc2ySwM_362.230 Anthoceros agrestis HOM05D004607 ORTHO05D005836 1.7e-14 83.6 137 39.4
Cre09.g387504 Chlamydomonas reinhardtii HOM05D004607 ORTHO05D005836 4.4e-10 68.9 166 30.1
FAN19G1486 Fragaria x ananassa HOM05D004607 ORTHO05D005836 3.2e-08 62.8 50 72.0
VMungo0251G1148 Vigna mungo HOM05D004607 ORTHO05D005836 1.2e-07 60.8 68 54.4
VMungo0703G0001 Vigna mungo HOM05D004607 ORTHO05D005836 1.2e-07 60.8 68 54.4
CBR_g18647 Chara braunii HOM05D004607 ORTHO05D005836 2.0e-07 60.1 165 29.1


User provided reference genes

Program Settings