Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c26638.3 Carica papaya HOM05D005844 ORTHO05D007203 7.9e-166 587.0 295 100.0
THA.LOC104823955 Tarenaya hassleriana HOM05D005844 ORTHO05D007203 7.5e-116 421.0 287 76.3
THA.LOC104805364 Tarenaya hassleriana HOM05D005844 ORTHO05D007203 2.8e-115 419.1 289 74.7
Ciclev10016139m.g Citrus clementina HOM05D005844 ORTHO05D007203 5.6e-111 404.8 254 78.0
Gohir.D04G058000 Gossypium hirsutum HOM05D005844 ORTHO05D007203 6.8e-109 397.9 286 71.0
Duzib187G1685 Durio zibethinus HOM05D005844 ORTHO05D007203 4.4e-108 395.2 292 69.5
Cfa007347 Carpinus fangiana HOM05D005844 ORTHO05D007203 1.3e-107 393.7 230 81.3
Gohir.A05G355200 Gossypium hirsutum HOM05D005844 ORTHO05D007203 1.3e-107 393.7 286 70.3
Gorai.012G064700 Gossypium raimondii HOM05D005844 ORTHO05D007203 8.3e-107 391.0 285 70.2
Sp7g01340 Schrenkiella parvula HOM05D005844 ORTHO05D007203 8.3e-107 391.0 291 68.7
Potri.001G344000 Populus trichocarpa HOM05D005844 ORTHO05D007203 1.1e-106 390.6 251 76.1
CiPaw.03G045000 Carya illinoinensis HOM05D005844 ORTHO05D007203 2.4e-106 389.4 289 69.9
Thhalv10027875m.g Eutrema salsugineum HOM05D005844 ORTHO05D007203 3.2e-106 389.0 290 68.6
Actinidia36121 Actinidia chinensis HOM05D005844 ORTHO05D007203 5.4e-106 388.3 235 77.4
Thecc.04G018700 Theobroma cacao HOM05D005844 ORTHO05D007203 7.0e-106 387.9 286 69.6
CSS0012729 Camellia sinensis var. sinensis HOM05D005844 ORTHO05D007203 1.2e-105 387.1 282 68.8
BcaB06g27527 Brassica carinata HOM05D005844 ORTHO05D007203 2.0e-105 386.3 248 76.6
TWI56G0011 Tripterygium wilfordii HOM05D005844 ORTHO05D007203 7.8e-105 384.4 296 66.9
RcHm_v2.0_Chr2g0173161 Rosa chinensis HOM05D005844 ORTHO05D007203 1.0e-104 384.0 267 74.2
COL.COLO4_29165 Corchorus olitorius HOM05D005844 ORTHO05D007203 2.3e-104 382.9 221 82.4
FAN05G4937 Fragaria x ananassa HOM05D005844 ORTHO05D007203 2.3e-104 382.9 284 69.7
AT5G40530 Arabidopsis thaliana HOM05D005844 ORTHO05D007203 3.0e-104 382.5 255 75.3
QL02p074142 Quercus lobata HOM05D005844 ORTHO05D007203 3.0e-104 382.5 282 68.4
AL7G49290 Arabidopsis lyrata HOM05D005844 ORTHO05D007203 3.9e-104 382.1 232 80.6
Carub.0007s3499 Capsella rubella HOM05D005844 ORTHO05D007203 5.0e-104 381.7 278 71.6
Aqoxy5G03753 Aquilegia oxysepala HOM05D005844 ORTHO05D007203 8.6e-104 380.9 279 69.5
Dinv09631 Davidia involucrata HOM05D005844 ORTHO05D007203 1.5e-103 380.2 251 73.7
Dinv33434 Davidia involucrata HOM05D005844 ORTHO05D007203 1.5e-103 380.2 251 73.7
A04p13570 Brassica napus HOM05D005844 ORTHO05D007203 2.5e-103 379.4 292 68.2
TWI36G0829 Tripterygium wilfordii HOM05D005844 ORTHO05D007203 4.3e-103 378.6 245 74.3
FAN14G2428 Fragaria x ananassa HOM05D005844 ORTHO05D007203 5.6e-103 378.3 284 69.4
Rhsim10G0015300 Rhododendron simsii HOM05D005844 ORTHO05D007203 5.6e-103 378.3 227 78.4
Rhsim10G0016000 Rhododendron simsii HOM05D005844 ORTHO05D007203 5.6e-103 378.3 227 78.4
Actinidia05987 Actinidia chinensis HOM05D005844 ORTHO05D007203 7.3e-103 377.9 285 68.1
C04p47350 Brassica napus HOM05D005844 ORTHO05D007203 9.5e-103 377.5 292 67.1
Lj1g0026070 Lotus japonicus HOM05D005844 ORTHO05D007203 3.6e-102 375.6 240 73.8
HanXRQChr02g0043121 Helianthus annuus HOM05D005844 ORTHO05D007203 6.2e-102 374.8 236 74.6
ECA247G4055 Erigeron canadensis HOM05D005844 ORTHO05D007203 1.1e-101 374.0 290 65.5
FvH4_6g51630 Fragaria vesca HOM05D005844 ORTHO05D007203 1.8e-101 373.2 284 68.7
FAN09G1449 Fragaria x ananassa HOM05D005844 ORTHO05D007203 2.3e-101 372.9 286 68.2
Sabra16G0223300 Salix brachista HOM05D005844 ORTHO05D007203 2.3e-101 372.9 271 70.5
PGR142G0612 Punica granatum HOM05D005844 ORTHO05D007203 3.1e-101 372.5 256 72.3
Aa31LG9G1090 Aethionema arabicum HOM05D005844 ORTHO05D007203 6.8e-101 371.3 295 66.1
Prupe.3G293000 Prunus persica HOM05D005844 ORTHO05D007203 6.8e-101 371.3 230 77.4
Nn4g22606 Nelumbo nucifera HOM05D005844 ORTHO05D007203 8.9e-101 370.9 266 68.4
BcaB02g07945 Brassica carinata HOM05D005844 ORTHO05D007203 1.2e-100 370.5 291 67.0
Hma1.2p1_2550F.1_g324230 Hydrangea macrophylla HOM05D005844 ORTHO05D007203 1.2e-100 370.5 292 66.8
GSVIVG01032391001 Vitis vinifera HOM05D005844 ORTHO05D007203 1.2e-100 370.5 221 79.2
MD17G1023500 Malus domestica HOM05D005844 ORTHO05D007203 1.5e-100 370.2 289 65.7
vmacro05871 Vaccinium macrocarpon HOM05D005844 ORTHO05D007203 2.0e-100 369.8 292 64.7
Sc16g0003190 Simmondsia chinensis HOM05D005844 ORTHO05D007203 3.4e-100 369.0 220 78.2
VMungo0464G1123 Vigna mungo HOM05D005844 ORTHO05D007203 3.4e-100 369.0 239 74.1
Cc07_g01570 Coffea canephora HOM05D005844 ORTHO05D007203 5.8e-100 368.2 227 75.8
SalBow7G1242 Salvia bowleyana HOM05D005844 ORTHO05D007203 5.8e-100 368.2 236 75.0
Medtr2g062880 Medicago truncatula HOM05D005844 ORTHO05D007203 1.3e-99 367.1 253 70.4
Solyc02g093390.4 Solanum lycopersicum HOM05D005844 ORTHO05D007203 1.3e-99 367.1 237 75.1
FAN02G1237 Fragaria x ananassa HOM05D005844 ORTHO05D007203 2.9e-99 365.9 284 67.3
Migut.K01404 Erythranthe guttata HOM05D005844 ORTHO05D007203 4.9e-99 365.2 226 77.4
MSTRG.3288 Avicennia marina HOM05D005844 ORTHO05D007203 8.3e-99 364.4 282 66.3
Phvul.004G044500 Phaseolus vulgaris HOM05D005844 ORTHO05D007203 8.3e-99 364.4 259 67.2
Medtr7g033530 Medicago truncatula HOM05D005844 ORTHO05D007203 1.1e-98 364.0 253 68.8
CsaV3_5G027090 Cucumis sativus L. HOM05D005844 ORTHO05D007203 1.4e-98 363.6 282 66.7
ClCG09G019300 Citrullus lanatus HOM05D005844 ORTHO05D007203 5.4e-98 361.7 282 66.3
CANSAT64G0956 Cannabis sativa HOM05D005844 ORTHO05D007203 7.0e-98 361.3 296 63.9
Dinv07356 Davidia involucrata HOM05D005844 ORTHO05D007203 9.2e-98 360.9 249 70.7
Eucgr.I01735 Eucalyptus grandis HOM05D005844 ORTHO05D007203 6.0e-97 358.2 262 67.2
Nitab4.5_0003318g0030 Nicotiana tabacum HOM05D005844 ORTHO05D007203 1.0e-96 357.5 290 66.2
Haze_14753 Corylus avellana HOM05D005844 ORTHO05D007203 5.1e-96 355.1 260 67.3
Manes.15G150500 Manihot esculenta HOM05D005844 ORTHO05D007203 5.1e-96 355.1 285 66.7
PGSC0003DMG400012605 Solanum tuberosum HOM05D005844 ORTHO05D007203 5.1e-96 355.1 287 65.9
Lalb_Chr08g0243241 Lupinus albus HOM05D005844 ORTHO05D007203 6.6e-96 354.8 287 65.5
DCAR_021727 Daucus carota HOM05D005844 ORTHO05D007203 1.5e-95 353.6 220 74.5
Os02g0593900 Oryza sativa ssp. japonica HOM05D005844 ORTHO05D007203 1.5e-95 353.6 244 68.9
unitig_46.g18705 Utricularia gibba HOM05D005844 ORTHO05D007203 7.3e-95 351.3 284 64.8
Sopen02g037980 Solanum pennellii HOM05D005844 ORTHO05D007203 1.6e-94 350.1 284 65.1
arahy.Tifrunner.gnm1.ann1.RG8FT8 Arachis hypogaea HOM05D005844 ORTHO05D007203 8.1e-94 347.8 220 73.2
Zm00001eb205620 Zea mays HOM05D005844 ORTHO05D007203 1.1e-93 347.4 237 67.9
SGA_v2.0_scaffold18G08274 Striga asiatica HOM05D005844 ORTHO05D007203 2.3e-93 346.3 228 71.9
Cfa007344 Carpinus fangiana HOM05D005844 ORTHO05D007203 2.6e-92 342.8 300 63.7
PSO407G0181 Papaver somniferum HOM05D005844 ORTHO05D007203 3.4e-92 342.4 256 67.2
CSS0002651 Camellia sinensis var. sinensis HOM05D005844 ORTHO05D007203 1.7e-91 340.1 282 63.1
PSO111G0092 Papaver somniferum HOM05D005844 ORTHO05D007203 1.9e-90 336.7 256 66.4
ATR0824G194 Amborella trichopoda HOM05D005844 ORTHO05D007203 9.2e-90 334.3 286 60.5
MELO3C021585.2 Cucumis melo HOM05D005844 ORTHO05D007203 9.2e-90 334.3 281 62.6
Nitab4.5_0001860g0130 Nicotiana tabacum HOM05D005844 ORTHO05D007203 1.6e-89 333.6 284 64.1
HPP92_020245 Vanilla planifolia HOM05D005844 ORTHO05D007203 1.6e-89 333.6 288 61.1
Glyma.19G056800 Glycine max HOM05D005844 ORTHO05D007203 2.1e-89 333.2 260 64.2
Psat4g044480 Pisum sativum HOM05D005844 ORTHO05D007203 4.6e-89 332.0 301 57.5
BraA04t17017Z Brassica rapa HOM05D005844 ORTHO05D007203 6.6e-88 328.2 273 63.0
BolC4t26336H Brassica oleracea HOM05D005844 ORTHO05D007203 1.9e-87 326.6 273 62.6
Glyma.16G069400 Glycine max HOM05D005844 ORTHO05D007203 1.8e-85 320.1 240 65.4
CDE09G0856 Ceratophyllum demersum HOM05D005844 ORTHO05D007203 4.4e-84 315.5 201 75.1
Sed0014974 Sechium edule HOM05D005844 ORTHO05D007203 3.8e-83 312.4 246 67.1
Lj7A600G48 Lonicera japonica HOM05D005844 ORTHO05D007203 6.4e-83 311.6 182 81.3
SMO169G0126 Selaginella moellendorffii HOM05D005844 ORTHO05D007203 8.4e-83 311.2 221 67.9
VMungo1215G2157 Vigna mungo HOM05D005844 ORTHO05D007203 1.9e-82 310.1 221 67.0
Mapoly0055s0119 Marchantia polymorpha HOM05D005844 ORTHO05D007203 2.1e-81 306.6 229 62.9
PSO754G0028 Papaver somniferum HOM05D005844 ORTHO05D007203 6.6e-80 301.6 253 59.3
Ca_08532_v3 Cicer arietinum L. HOM05D005844 ORTHO05D007203 1.5e-79 300.4 275 58.5
arahy.Tifrunner.gnm1.ann1.V6CENM Arachis hypogaea HOM05D005844 ORTHO05D007203 3.3e-79 299.3 259 58.7
Ca_25854_v3 Cicer arietinum L. HOM05D005844 ORTHO05D007203 3.3e-79 299.3 221 66.5
TAR629G2614 Trochodendron aralioides HOM05D005844 ORTHO05D007203 1.6e-78 297.0 230 67.0
CARHR261450 Cardamine hirsuta HOM05D005844 ORTHO05D007203 2.8e-78 296.2 179 79.9
AagrBONN_evm.TU.Sc2ySwM_344.1282 Anthoceros agrestis HOM05D005844 ORTHO05D007203 3.6e-78 295.8 322 50.3
Pp3c18_8570 Physcomitrium patens HOM05D005844 ORTHO05D007203 6.9e-77 291.6 279 53.8
Lsat_1_v5_gn_1_11001 Lactuca sativa HOM05D005844 ORTHO05D007203 7.6e-76 288.1 174 80.5
Hma1.2p1_1747F.1_g300470 Hydrangea macrophylla HOM05D005844 ORTHO05D007203 1.3e-75 287.3 183 76.5
EL10Ac6g14092 Beta vulgaris HOM05D005844 ORTHO05D007203 8.4e-75 284.6 285 54.7
CBR_g37477 Chara braunii HOM05D005844 ORTHO05D007203 5.4e-74 282.0 259 54.4
Peaxi162Scf00129g01647 Petunia axillaris HOM05D005844 ORTHO05D007203 3.5e-73 279.3 183 73.2
MBI06_g16054_MAGBIO Magnolia biondii HOM05D005844 ORTHO05D007203 5.6e-71 271.9 301 50.5
CAN.G473.16 Capsicum annuum HOM05D005844 ORTHO05D007203 4.6e-65 252.3 164 74.4
Cfa007349 Carpinus fangiana HOM05D005844 ORTHO05D007203 1.9e-63 246.9 294 53.4
Ah.03g137020 Amaranthus hybridus HOM05D001812 ORTHO05D001874 6.2e-62 241.9 193 62.7
MCO16G365 Micromonas commoda HOM05D005844 ORTHO05D007203 8.4e-59 231.5 232 52.6
Cre07.g323450 Chlamydomonas reinhardtii HOM05D005844 ORTHO05D007203 1.0e-51 208.0 265 44.2
SHI16461 Sapria himalayana HOM05D005844 ORTHO05D007203 3.5e-49 199.5 308 39.3
Atru.chr6.2417 Acer truncatum HOM05D005844 ORTHO05D007203 6.7e-48 195.3 126 77.0
TPR.G1078 Trifolium pratense HOM05D005844 ORTHO05D007203 1.1e-45 188.0 124 67.7
PRCOL_00001214 Prasinoderma coloniale HOM05D005844 ORTHO05D007203 3.1e-45 186.4 260 42.7
TPR.G11046 Trifolium pratense HOM05D005844 ORTHO05D007203 1.7e-43 180.6 142 60.6
TPR.G35964 Trifolium pratense HOM05D005844 ORTHO05D007203 2.5e-42 176.8 113 76.1
vmacro09039 Vaccinium macrocarpon HOM05D005844 ORTHO05D007203 3.9e-40 169.5 308 39.6
TAR629G1250 Trochodendron aralioides HOM05D005844 ORTHO05D007203 7.4e-39 165.2 119 68.1
SMO202G0011 Selaginella moellendorffii HOM05D005844 ORTHO05D007203 4.2e-34 149.4 116 63.8
BolC4t27198H Brassica oleracea HOM05D005844 ORTHO05D007203 2.0e-31 140.6 125 62.4
Atru.chr2.3681 Acer truncatum HOM05D005844 ORTHO05D007203 4.1e-29 132.9 77 83.1
Rhsim10G0015100 Rhododendron simsii HOM05D014363 ORTHO05D019497 2.7e-25 120.2 78 71.8
QL12p001810 Quercus lobata HOM05D005844 ORTHO05D007203 8.0e-25 118.6 72 75.0
Cfa024741 Carpinus fangiana HOM05D005844 ORTHO05D007203 5.2e-24 115.9 285 30.9
SEGI_32629 Sequoiadendron giganteum HOM05D005844 ORTHO05D007203 4.1e-21 106.3 81 61.7
AUR62043289 Chenopodium quinoa HOM05D005844 ORTHO05D007203 3.0e-16 90.1 76 56.6
CARHR261460 Cardamine hirsuta HOM05D005844 ORTHO05D007203 1.2e-15 88.2 56 71.4
SHI16462 Sapria himalayana HOM05D005844 ORTHO05D007203 5.5e-10 69.3 99 41.4


User provided reference genes

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