Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c26340.3 Carica papaya HOM05D000926 ORTHO05D000707 3.5e-59 231.5 123 100.0
Duzib084G1204 Durio zibethinus HOM05D000926 ORTHO05D000707 1.2e-11 73.6 93 41.9
Ciclev10023021m.g Citrus clementina HOM05D000926 ORTHO05D000707 2.3e-10 69.3 84 45.2
Gohir.D03G099400 Gossypium hirsutum HOM05D000926 ORTHO05D000707 3.9e-10 68.6 79 48.1
Gorai.003G104400 Gossypium raimondii HOM05D000926 ORTHO05D000707 3.9e-10 68.6 79 48.1
Gohir.A03G072800 Gossypium hirsutum HOM05D000926 ORTHO05D000707 8.8e-10 67.4 79 48.1
Thecc.03G112300 Theobroma cacao HOM05D000926 ORTHO05D000707 1.1e-09 67.0 92 45.7
COL.COLO4_33437 Corchorus olitorius HOM05D000926 ORTHO05D000707 1.5e-09 66.6 82 47.6
Manes.01G105900 Manihot esculenta HOM05D000926 ORTHO05D000707 3.3e-09 65.5 90 45.6
Haze_14349 Corylus avellana HOM05D000926 ORTHO05D000707 4.4e-09 65.1 107 41.1
Eucgr.J01435 Eucalyptus grandis HOM05D000926 ORTHO05D000707 5.7e-09 64.7 88 42.0
TAR374G1048 Trochodendron aralioides HOM05D000926 ORTHO05D000707 9.7e-09 63.9 102 37.3
Manes.05G115600 Manihot esculenta HOM05D000926 ORTHO05D000707 1.3e-08 63.5 88 47.7
Eucgr.J01438 Eucalyptus grandis HOM05D000926 ORTHO05D000707 4.8e-08 61.6 89 41.6
Glyma.18G277600 Glycine max HOM05D000926 ORTHO05D000707 4.8e-08 61.6 110 39.1
Lalb_Chr10g0092481 Lupinus albus HOM05D000926 ORTHO05D000707 6.3e-08 61.2 119 37.0
Eucgr.J01437 Eucalyptus grandis HOM05D000926 ORTHO05D000707 1.4e-07 60.1 88 37.5
Gohir.A07G178200 Gossypium hirsutum HOM05D000926 ORTHO05D000707 1.4e-07 60.1 94 44.7
Thecc.04G113000 Theobroma cacao HOM05D000926 ORTHO05D000707 1.8e-07 59.7 101 40.6
Aqoxy3G00596 Aquilegia oxysepala HOM05D000926 ORTHO05D000707 2.4e-07 59.3 99 40.4
Dinv34883 Davidia involucrata HOM05D000926 ORTHO05D000707 3.1e-07 58.9 101 38.6
MSTRG.2959 Avicennia marina HOM05D000926 ORTHO05D000707 5.3e-07 58.2 100 36.0
Duzib211G0100 Durio zibethinus HOM05D000926 ORTHO05D000707 7.0e-07 57.8 92 41.3
Potri.017G107300 Populus trichocarpa HOM05D000926 ORTHO05D000707 7.0e-07 57.8 83 42.2
Cfa007731 Carpinus fangiana HOM05D000926 ORTHO05D000707 1.2e-06 57.0 93 40.9
Duzib138G1671 Durio zibethinus HOM05D000926 ORTHO05D000707 1.5e-06 56.6 101 37.6
Nn3g17603 Nelumbo nucifera HOM05D000926 ORTHO05D000707 1.5e-06 56.6 97 35.1
Glyma.08G254800 Glycine max HOM05D000926 ORTHO05D000707 2.0e-06 56.2 106 37.7
ATR0691G108 Amborella trichopoda HOM05D000926 ORTHO05D000707 2.6e-06 55.8 80 40.0
Gohir.D07G185000 Gossypium hirsutum HOM05D000926 ORTHO05D000707 2.6e-06 55.8 94 40.4
Gorai.001G205500 Gossypium raimondii HOM05D000926 ORTHO05D000707 2.6e-06 55.8 94 40.4
Rhsim08G0078900 Rhododendron simsii HOM05D000926 ORTHO05D000707 2.6e-06 55.8 91 37.4
MBI15_g03197_MAGBIO Magnolia biondii HOM05D000926 ORTHO05D000707 3.4e-06 55.5 91 45.1
Psat1g064720 Pisum sativum HOM05D000926 ORTHO05D000707 3.4e-06 55.5 77 37.7
Atru.chr9.649 Acer truncatum HOM05D000926 ORTHO05D000707 4.5e-06 55.1 92 42.4
CiPaw.03G080100 Carya illinoinensis HOM05D000926 ORTHO05D000707 4.5e-06 55.1 96 41.7
Hma1.2p1_2231F.1_g317580 Hydrangea macrophylla HOM05D000926 ORTHO05D000707 4.5e-06 55.1 95 37.9
QL02p063891 Quercus lobata HOM05D000926 ORTHO05D000707 4.5e-06 55.1 102 39.2
Sabra17G0090100 Salix brachista HOM05D000926 ORTHO05D000707 4.5e-06 55.1 88 42.0
MSTRG.3384 Avicennia marina HOM05D000926 ORTHO05D000707 5.9e-06 54.7 94 37.2
Lj1g0009060 Lotus japonicus HOM05D000926 ORTHO05D000707 5.9e-06 54.7 95 37.9
Glyma.04G058800 Glycine max HOM05D000926 ORTHO05D000707 7.7e-06 54.3 117 33.3
TPR.G3253 Trifolium pratense HOM05D000926 ORTHO05D000707 7.7e-06 54.3 79 44.3


User provided reference genes

Program Settings