Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 5.8e-280 966.8 466 100.0
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 1.6e-261 905.6 466 92.9
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 8.1e-258 893.3 495 87.7
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 4.1e-233 811.2 466 84.1
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 3.6e-189 665.2 459 68.6
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 1.8e-188 662.9 429 72.3
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 1.5e-187 659.8 460 68.3
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 4.4e-187 658.3 427 71.9
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 1.3e-186 656.8 459 68.6
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 3.7e-186 655.2 425 72.2
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 6.4e-186 654.4 453 67.3
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 6.4e-186 654.4 425 71.3
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 8.3e-186 654.1 425 71.1
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 8.3e-186 654.1 427 70.0
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 1.1e-185 653.7 455 68.8
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 5.4e-185 651.4 425 70.8
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 1.2e-184 650.2 464 67.2
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 4.6e-184 648.3 456 66.7
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 4.6e-184 648.3 460 67.2
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 6.0e-184 647.9 429 69.2
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 7.8e-184 647.5 425 71.8
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 1.3e-183 646.7 440 69.5
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 1.7e-183 646.4 461 66.4
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 8.6e-183 644.0 460 66.3
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 4.3e-182 641.7 449 67.9
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 3.6e-181 638.6 466 64.8
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 1.1e-180 637.1 463 65.7
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 6.8e-180 634.4 466 65.7
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 1.5e-179 633.3 433 67.2
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 3.4e-179 632.1 425 69.9
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 3.2e-177 625.5 425 69.2
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 4.1e-177 625.2 441 67.3
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 4.1e-177 625.2 463 64.8
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 1.2e-176 623.6 466 63.3
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 4.6e-176 621.7 432 66.4
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 7.8e-176 620.9 466 63.9
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 1.0e-175 620.5 459 64.5
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 8.6e-175 617.5 409 69.4
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 1.1e-174 617.1 467 61.9
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 4.3e-174 615.1 441 66.4
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 5.6e-174 614.8 442 65.4
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 3.6e-173 612.1 424 67.0
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 1.1e-172 610.5 431 66.4
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 1.8e-172 609.8 462 64.7
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 2.3e-172 609.4 425 65.4
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 1.2e-171 607.1 430 66.0
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 1.2e-171 607.1 454 62.8
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 1.5e-171 606.7 428 65.2
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 4.4e-171 605.1 425 64.7
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 4.4e-171 605.1 425 64.5
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 5.8e-171 604.7 430 64.2
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 5.8e-171 604.7 454 62.8
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 2.2e-170 602.8 425 64.9
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 2.2e-170 602.8 425 64.9
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 2.9e-170 602.4 397 70.3
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 5.4e-169 598.2 425 64.7
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 2.3e-167 592.8 466 61.6
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 3.3e-166 589.0 411 66.9
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 9.6e-166 587.4 428 65.0
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 1.2e-163 580.5 435 63.0
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 2.0e-163 579.7 464 59.5
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 2.6e-163 579.3 429 62.7
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 1.3e-162 577.0 454 62.6
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 2.9e-162 575.9 435 62.3
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 1.9e-161 573.2 427 63.7
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 2.4e-161 572.8 431 63.1
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 3.2e-161 572.4 460 60.7
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 3.2e-161 572.4 410 66.8
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 4.6e-160 568.5 425 63.3
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 1.3e-159 567.0 396 65.9
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 1.7e-159 566.6 468 59.4
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 2.3e-159 566.2 437 61.6
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 3.8e-154 548.9 403 65.0
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 1.9e-150 536.6 460 58.5
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 1.3e-149 533.9 425 59.5
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 6.9e-148 528.1 436 60.8
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 1.8e-143 513.5 429 58.7
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 2.8e-141 506.1 405 58.8
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 3.7e-141 505.8 333 72.4
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 1.1e-140 504.2 429 56.4
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 5.3e-140 501.9 402 61.2
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 2.2e-138 496.5 338 68.0
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 1.1e-137 494.2 455 52.7
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.4e-137 493.8 416 59.4
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 2.1e-136 490.0 317 69.7
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 4.6e-136 488.8 356 67.1
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.8e-132 476.9 398 60.6
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 4.1e-132 475.7 353 65.2
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 2.0e-131 473.4 413 54.7
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 8.4e-130 468.0 385 60.5
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 1.6e-128 463.8 337 64.7
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 1.8e-127 460.3 337 64.4
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 4.2e-113 412.5 434 46.5
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 2.0e-99 367.1 226 73.5
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 2.2e-93 347.1 244 65.2
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 5.6e-81 305.8 243 61.3
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 5.0e-74 282.7 197 66.0
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 1.4e-71 274.6 261 54.8
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 1.6e-59 234.6 384 36.7
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 4.9e-53 213.0 130 74.6
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 4.9e-53 213.0 130 74.6
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 1.5e-49 201.4 187 54.0
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 1.6e-43 181.4 387 33.3
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 1.2e-38 165.2 161 53.4
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 1.3e-32 145.2 132 50.8
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 9.0e-31 139.0 180 46.7
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 9.0e-31 139.0 180 46.7
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 7.1e-28 129.4 77 79.2
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 2.1e-24 117.9 111 50.5
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 8.4e-21 105.9 63 71.4
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 1.4e-20 105.1 76 65.8
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 1.3e-16 92.0 213 30.0
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 1.3e-13 82.0 209 30.1
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 5.0e-13 80.1 211 29.4
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 5.1e-10 70.1 75 45.3
Cre07.g321350 Chlamydomonas reinhardtii HOM05D019562 ORTHO05D021280 6.7e-10 69.7 379 20.3


User provided reference genes

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