Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 1.8e-96 355.9 176 100.0
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 1.7e-86 322.8 185 89.2
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 8.2e-86 320.5 183 88.0
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 7.7e-84 313.9 186 87.1
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 9.1e-69 263.8 184 73.9
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 3.5e-68 261.9 183 72.7
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 2.9e-67 258.8 185 71.9
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 3.2e-66 255.4 188 70.7
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 7.2e-66 254.2 181 73.5
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 9.5e-66 253.8 182 72.0
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 3.6e-65 251.9 176 71.6
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 8.0e-65 250.8 182 72.0
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.4e-64 250.0 181 72.4
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 1.4e-64 250.0 192 67.2
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 1.8e-64 249.6 187 70.6
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 2.3e-64 249.2 188 67.6
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 5.2e-64 248.1 170 75.9
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 5.2e-64 248.1 182 72.0
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 5.2e-64 248.1 181 71.8
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 6.8e-64 247.7 183 71.6
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 8.8e-64 247.3 192 66.7
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 1.5e-63 246.5 183 71.0
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.5e-63 246.5 181 71.3
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 1.5e-63 246.5 186 69.4
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 2.0e-63 246.1 168 73.2
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 2.0e-63 246.1 187 70.1
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 2.6e-63 245.7 183 69.4
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 1.3e-62 243.4 193 65.8
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 8.3e-62 240.7 179 69.3
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 2.4e-61 239.2 175 69.7
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 3.1e-61 238.8 171 70.2
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 4.1e-61 238.4 180 66.7
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 4.1e-61 238.4 172 72.1
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 4.1e-61 238.4 162 74.7
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 5.4e-61 238.0 182 67.6
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 7.0e-61 237.7 171 71.3
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 7.0e-61 237.7 180 67.2
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 9.2e-61 237.3 183 68.3
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 1.6e-60 236.5 167 71.3
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 1.6e-60 236.5 180 67.2
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 2.0e-60 236.1 179 69.3
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 2.7e-60 235.7 177 70.6
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 5.9e-60 234.6 177 68.4
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 7.8e-60 234.2 172 71.5
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 2.9e-59 232.3 178 66.3
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 5.0e-59 231.5 170 68.8
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 1.1e-58 230.3 174 70.1
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 1.9e-58 229.6 173 68.2
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 2.5e-58 229.2 174 68.4
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 3.3e-58 228.8 176 64.2
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 5.6e-58 228.0 161 70.8
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 5.6e-58 228.0 177 67.8
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 9.5e-58 227.3 180 66.1
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 1.2e-57 226.9 173 65.3
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 2.1e-57 226.1 174 63.2
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 3.6e-57 225.3 176 68.2
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 6.1e-57 224.6 180 63.9
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 8.0e-57 224.2 183 63.9
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 1.0e-56 223.8 182 67.0
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 3.0e-56 222.2 179 65.4
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 3.0e-56 222.2 147 70.7
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 4.0e-56 221.9 168 67.3
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 8.9e-56 220.7 180 60.0
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 1.2e-55 220.3 179 67.0
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 2.0e-55 219.5 179 67.0
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 2.0e-55 219.5 173 65.9
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 2.0e-55 219.5 144 75.0
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 2.0e-55 219.5 173 64.7
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 2.6e-55 219.2 174 64.9
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 3.4e-55 218.8 182 64.3
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 4.4e-55 218.4 147 69.4
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 9.8e-55 217.2 159 69.8
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 1.7e-54 216.5 147 68.7
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 1.7e-54 216.5 162 63.6
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 1.7e-54 216.5 162 63.6
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 2.2e-54 216.1 147 68.7
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 3.7e-54 215.3 162 63.0
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 3.7e-54 215.3 162 63.0
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 4.9e-54 214.9 162 63.0
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 4.1e-53 211.8 162 63.6
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 5.4e-53 211.5 241 50.6
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 1.2e-52 210.3 135 75.6
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 1.6e-52 209.9 136 77.9
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 2.7e-52 209.1 127 80.3
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 1.3e-51 206.8 181 62.4
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 5.0e-51 204.9 135 74.1
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 8.6e-51 204.1 147 65.3
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 1.5e-50 203.4 131 76.3
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 5.6e-50 201.4 166 62.0
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 6.8e-48 194.5 178 57.3
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 1.2e-47 193.7 179 55.9
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 7.0e-45 184.5 133 69.9
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 1.7e-38 163.3 125 64.0
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 9.2e-37 157.5 177 52.5
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 4.6e-36 155.2 181 47.0
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 1.9e-34 149.8 197 45.7
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 2.1e-33 146.4 147 58.5
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 3.6e-33 145.6 154 53.9
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 4.0e-32 142.1 150 46.7
Glyma.04G016200 Glycine max HOM05D007018 ORTHO05D008887 5.8e-31 138.3 101 72.3
Prupe.5G008600 Prunus persica HOM05D007018 ORTHO05D008887 1.1e-29 134.0 82 76.8
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 1.4e-24 117.1 180 42.8
Hma1.2p1_0699F.1_g205580 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 2.4e-24 116.3 87 66.7
Potri.002G007601 Populus trichocarpa HOM05D007018 ORTHO05D008887 7.1e-21 104.8 74 68.9
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 1.0e-19 100.9 159 35.2
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 3.0e-19 99.4 127 46.5
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 4.3e-18 95.5 155 41.9
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 3.1e-16 89.4 71 60.6
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 2.6e-15 86.3 126 38.9
SHI07963 Sapria himalayana HOM05D007018 ORTHO05D008887 9.6e-10 67.8 40 77.5
SEGI_04341 Sequoiadendron giganteum HOM05D007018 ORTHO05D008887 1.6e-09 67.0 61 50.8
HPP92_012557 Vanilla planifolia HOM05D007018 ORTHO05D008887 2.9e-06 56.2 66 43.9
SHI07962 Sapria himalayana HOM05D007018 ORTHO05D008887 4.9e-06 55.5 36 69.4


User provided reference genes

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