Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG11G018840 Citrullus lanatus HOM05D006240 ORTHO05D007709 2.9e-152 542.0 277 100.0
MELO3C017040.2 Cucumis melo HOM05D006240 ORTHO05D007709 3.1e-85 319.3 277 66.8
CsaV3_4G037430 Cucumis sativus L. HOM05D006240 ORTHO05D007709 4.4e-84 315.5 277 66.8
Sed0018366 Sechium edule HOM05D006240 ORTHO05D007709 1.3e-83 313.9 279 67.7
CiPaw.08G075400 Carya illinoinensis HOM05D006240 ORTHO05D007709 6.0e-41 172.2 270 44.1
QL02p015120 Quercus lobata HOM05D006240 ORTHO05D007709 2.3e-40 170.2 264 45.1
GSVIVG01013393001 Vitis vinifera HOM05D006240 ORTHO05D007709 3.0e-40 169.9 265 44.9
TAR628G0625 Trochodendron aralioides HOM05D006240 ORTHO05D007709 8.7e-40 168.3 268 43.3
CANSAT56G3734 Cannabis sativa HOM05D006240 ORTHO05D007709 2.5e-39 166.8 278 43.5
TAR376G0245 Trochodendron aralioides HOM05D006240 ORTHO05D007709 2.5e-39 166.8 265 41.5
Dinv31964 Davidia involucrata HOM05D006240 ORTHO05D007709 3.3e-39 166.4 263 42.6
Potri.005G253101 Populus trichocarpa HOM05D006240 ORTHO05D007709 7.4e-39 165.2 238 46.2
Ciclev10002499m.g Citrus clementina HOM05D006240 ORTHO05D007709 2.8e-38 163.3 266 44.0
MBI05_g33294_MAGBIO Magnolia biondii HOM05D006240 ORTHO05D007709 1.4e-37 161.0 258 42.2
PSO210G3458 Papaver somniferum HOM05D006240 ORTHO05D007709 1.4e-37 161.0 244 42.2
Medtr3g115650 Medicago truncatula HOM05D006240 ORTHO05D007709 2.4e-37 160.2 251 40.2
PGR031G1135 Punica granatum HOM05D006240 ORTHO05D007709 2.4e-37 160.2 245 42.9
CSS0005151 Camellia sinensis var. sinensis HOM05D006240 ORTHO05D007709 1.2e-36 157.9 241 41.9
Hma1.2p1_0612F.1_g188890 Hydrangea macrophylla HOM05D006240 ORTHO05D007709 1.5e-36 157.5 269 42.8
Manes.13G069200 Manihot esculenta HOM05D006240 ORTHO05D007709 1.3e-35 154.5 279 41.2
Nn5g31000 Nelumbo nucifera HOM05D006240 ORTHO05D007709 1.3e-35 154.5 284 40.8
PSO170G2591 Papaver somniferum HOM05D006240 ORTHO05D007709 3.8e-35 152.9 262 39.3
Sabra05G0196300 Salix brachista HOM05D006240 ORTHO05D007709 4.9e-35 152.5 264 42.4
COL.COLO4_07215 Corchorus olitorius HOM05D006240 ORTHO05D007709 4.2e-34 149.4 231 44.2
Haze_22830 Corylus avellana HOM05D006240 ORTHO05D007709 1.6e-33 147.5 210 48.1
Glyma.19G151500 Glycine max HOM05D006240 ORTHO05D007709 2.7e-33 146.7 268 39.9
AL1G33760 Arabidopsis lyrata HOM05D006240 ORTHO05D007709 3.5e-33 146.4 265 39.6
Sp1g18470 Schrenkiella parvula HOM05D006240 ORTHO05D007709 6.0e-33 145.6 266 39.5
BcaB03g12855 Brassica carinata HOM05D006240 ORTHO05D007709 1.0e-32 144.8 269 40.5
ECA232G5059 Erigeron canadensis HOM05D006240 ORTHO05D007709 1.0e-32 144.8 261 38.3
vmacro21788 Vaccinium macrocarpon HOM05D006240 ORTHO05D007709 1.0e-32 144.8 263 39.2
RcHm_v2.0_Chr7g0215611 Rosa chinensis HOM05D006240 ORTHO05D007709 1.3e-32 144.4 240 42.9
Lj4C7G6 Lonicera japonica HOM05D006240 ORTHO05D007709 1.8e-32 144.1 261 39.8
C08p20350 Brassica napus HOM05D006240 ORTHO05D007709 2.3e-32 143.7 264 40.9
Glyma.03G148200 Glycine max HOM05D006240 ORTHO05D007709 3.0e-32 143.3 268 39.6
Lj1g0026125 Lotus japonicus HOM05D006240 ORTHO05D007709 6.7e-32 142.1 266 40.6
RcHm_v2.0_Chr1g0349471 Rosa chinensis HOM05D006240 ORTHO05D007709 6.7e-32 142.1 237 43.5
Actinidia15507 Actinidia chinensis HOM05D006240 ORTHO05D007709 1.1e-31 141.4 267 38.2
BcaC07g39051 Brassica carinata HOM05D006240 ORTHO05D007709 1.5e-31 141.0 265 41.1
Cfa014112 Carpinus fangiana HOM05D006240 ORTHO05D007709 1.5e-31 141.0 213 46.5
Duzib041G0618 Durio zibethinus HOM05D006240 ORTHO05D007709 1.9e-31 140.6 262 40.1
Nitab4.5_0006318g0100 Nicotiana tabacum HOM05D006240 ORTHO05D007709 1.9e-31 140.6 250 39.2
TPR.G38126 Trifolium pratense HOM05D006240 ORTHO05D007709 1.9e-31 140.6 251 38.6
CDE04G0018 Ceratophyllum demersum HOM05D006240 ORTHO05D007709 2.5e-31 140.2 251 39.4
FvH4_7g11300 Fragaria vesca HOM05D006240 ORTHO05D007709 2.5e-31 140.2 237 42.2
PGSC0003DMG400001324 Solanum tuberosum HOM05D006240 ORTHO05D007709 2.5e-31 140.2 260 36.9
Nn4g24539 Nelumbo nucifera HOM05D006240 ORTHO05D007709 3.3e-31 139.8 260 39.2
BolC8t49663H Brassica oleracea HOM05D006240 ORTHO05D007709 4.3e-31 139.4 270 40.4
THA.LOC104811476 Tarenaya hassleriana HOM05D006240 ORTHO05D007709 4.3e-31 139.4 264 37.9
Thecc.08G062400 Theobroma cacao HOM05D006240 ORTHO05D007709 4.3e-31 139.4 283 38.5
Aqoxy5G00997 Aquilegia oxysepala HOM05D006240 ORTHO05D007709 5.7e-31 139.0 247 38.9
unitig_578.g16237 Utricularia gibba HOM05D006240 ORTHO05D007709 5.7e-31 139.0 240 40.8
Ca_15403_v3 Cicer arietinum L. HOM05D006240 ORTHO05D007709 7.4e-31 138.7 242 38.4
Ca_29886_v3 Cicer arietinum L. HOM05D006240 ORTHO05D007709 7.4e-31 138.7 242 38.4
Phvul.001G146200 Phaseolus vulgaris HOM05D006240 ORTHO05D007709 7.4e-31 138.7 276 37.3
Rhsim06G0005200 Rhododendron simsii HOM05D006240 ORTHO05D007709 7.4e-31 138.7 266 39.1
A08p29270 Brassica napus HOM05D006240 ORTHO05D007709 9.6e-31 138.3 262 39.3
Carub.0001s2022 Capsella rubella HOM05D006240 ORTHO05D007709 9.6e-31 138.3 266 37.6
AUR62035138 Chenopodium quinoa HOM05D006240 ORTHO05D007709 9.6e-31 138.3 266 38.0
FAN03G2060 Fragaria x ananassa HOM05D006240 ORTHO05D007709 9.6e-31 138.3 237 41.8
Lalb_Chr11g0061501 Lupinus albus HOM05D006240 ORTHO05D007709 1.3e-30 137.9 263 37.3
Sopen02g032680 Solanum pennellii HOM05D006240 ORTHO05D007709 1.3e-30 137.9 250 36.4
Actinidia17059 Actinidia chinensis HOM05D006240 ORTHO05D007709 1.6e-30 137.5 267 37.5
Gorai.002G114700 Gossypium raimondii HOM05D006240 ORTHO05D007709 1.6e-30 137.5 264 39.0
Nitab4.5_0000564g0070 Nicotiana tabacum HOM05D006240 ORTHO05D007709 1.6e-30 137.5 250 38.8
AUR62042908 Chenopodium quinoa HOM05D006240 ORTHO05D007709 2.1e-30 137.1 268 37.7
AT1G20770 Arabidopsis thaliana HOM05D006240 ORTHO05D007709 2.8e-30 136.7 265 37.4
Peaxi162Scf00129g00239 Petunia axillaris HOM05D006240 ORTHO05D007709 2.8e-30 136.7 234 39.3
Thhalv10008759m.g Eutrema salsugineum HOM05D006240 ORTHO05D007709 3.7e-30 136.3 276 38.4
VMungo1383G1920 Vigna mungo HOM05D006240 ORTHO05D007709 3.7e-30 136.3 277 35.7
BcaC06g34834 Brassica carinata HOM05D006240 ORTHO05D007709 4.8e-30 136.0 272 37.9
C07p22820 Brassica napus HOM05D006240 ORTHO05D007709 4.8e-30 136.0 272 37.9
FAN10G2738 Fragaria x ananassa HOM05D006240 ORTHO05D007709 4.8e-30 136.0 243 41.2
BraA07t29290Z Brassica rapa HOM05D006240 ORTHO05D007709 6.2e-30 135.6 269 38.3
BraA08t34862Z Brassica rapa HOM05D006240 ORTHO05D007709 1.1e-29 134.8 264 38.6
CARHR021210 Cardamine hirsuta HOM05D006240 ORTHO05D007709 1.1e-29 134.8 264 38.3
BolC7t42820H Brassica oleracea HOM05D006240 ORTHO05D007709 1.4e-29 134.4 274 38.0
Psat5g009800 Pisum sativum HOM05D006240 ORTHO05D007709 1.4e-29 134.4 262 37.8
Ah.00g001020 Amaranthus hybridus HOM05D006240 ORTHO05D007709 1.8e-29 134.0 276 34.4
HPP92_012646 Vanilla planifolia HOM05D006240 ORTHO05D007709 2.4e-29 133.7 240 39.2
MSTRG.24503 Avicennia marina HOM05D006240 ORTHO05D007709 3.1e-29 133.3 260 38.1
A07p15490 Brassica napus HOM05D006240 ORTHO05D007709 3.1e-29 133.3 266 37.6
Cc04_g09300 Coffea canephora HOM05D006240 ORTHO05D007709 3.1e-29 133.3 289 34.6
Aa31LG7G4930 Aethionema arabicum HOM05D006240 ORTHO05D007709 4.0e-29 132.9 261 37.9
Gohir.D01G089000 Gossypium hirsutum HOM05D006240 ORTHO05D007709 4.0e-29 132.9 263 38.0
MD07G1117600 Malus domestica HOM05D006240 ORTHO05D007709 4.0e-29 132.9 236 40.3
Os04g0509200 Oryza sativa ssp. japonica HOM05D006240 ORTHO05D007709 4.0e-29 132.9 260 41.5
FAN06G3720 Fragaria x ananassa HOM05D006240 ORTHO05D007709 5.3e-29 132.5 243 40.7
CAN.G206.149 Capsicum annuum HOM05D006240 ORTHO05D007709 6.9e-29 132.1 255 35.7
TWI36G0187 Tripterygium wilfordii HOM05D006240 ORTHO05D007709 6.9e-29 132.1 267 38.6
EL10Ac4g09545 Beta vulgaris HOM05D006240 ORTHO05D007709 9.0e-29 131.7 267 36.0
DCAR_020858 Daucus carota HOM05D001217 ORTHO05D007709 9.0e-29 131.7 280 35.4
FAN01G0923 Fragaria x ananassa HOM05D006240 ORTHO05D007709 2.0e-28 130.6 270 38.1
BcaB03g14301 Brassica carinata HOM05D006240 ORTHO05D007709 4.5e-28 129.4 272 38.6
Lsat_1_v5_gn_2_1920 Lactuca sativa HOM05D006240 ORTHO05D007709 3.8e-27 126.3 252 38.5
SGA_v2.0_scaffold54G19646 Striga asiatica HOM05D006240 ORTHO05D007709 3.8e-27 126.3 236 37.7
Eucgr.K03289 Eucalyptus grandis HOM05D006240 ORTHO05D007709 1.1e-26 124.8 306 35.0
Migut.M00585 Erythranthe guttata HOM05D006240 ORTHO05D007709 3.2e-26 123.2 235 36.2
Prupe.2G140800 Prunus persica HOM05D006240 ORTHO05D007709 7.1e-26 122.1 236 38.1
MD02G1098700 Malus domestica HOM05D006240 ORTHO05D007709 1.2e-25 121.3 236 38.6
Atru.chr9.2231 Acer truncatum HOM05D006240 ORTHO05D007709 1.6e-25 120.9 258 35.3
SalBow6G2548 Salvia bowleyana HOM05D006240 ORTHO05D007709 3.5e-25 119.8 265 37.0
Gohir.A01G103700 Gossypium hirsutum HOM05D006240 ORTHO05D007709 7.9e-25 118.6 209 40.2
HanXRQChr16g0516421 Helianthus annuus HOM05D006240 ORTHO05D007709 3.0e-24 116.7 259 35.5
Hund05091 Selenicereus undatus HOM05D006240 ORTHO05D007709 4.3e-23 112.8 259 36.3
Sc15g0004230 Simmondsia chinensis HOM05D006240 ORTHO05D007709 4.3e-23 112.8 214 38.3
arahy.Tifrunner.gnm1.ann1.MR2FC0 Arachis hypogaea HOM05D006240 ORTHO05D007709 7.4e-23 112.1 264 33.3
Migut.N02969 Erythranthe guttata HOM05D006240 ORTHO05D007709 1.6e-22 110.9 234 34.2
Migut.M00223 Erythranthe guttata HOM05D006240 ORTHO05D007709 6.3e-22 109.0 271 32.5
Solyc02g087940.4 Solanum lycopersicum HOM05D006240 ORTHO05D007709 3.8e-19 99.8 126 46.0
Phvul.009G075200 Phaseolus vulgaris HOM05D006240 ORTHO05D007709 4.6e-17 92.8 168 41.7
Zm00001eb077760 Zea mays HOM05D006240 ORTHO05D007709 7.4e-15 85.5 134 47.0
arahy.Tifrunner.gnm1.ann1.W2HKS7 Arachis hypogaea HOM05D006240 ORTHO05D007709 1.7e-14 84.3 104 45.2
FAN10G3076 Fragaria x ananassa HOM05D006240 ORTHO05D007709 4.1e-13 79.7 113 44.2
ATR0807G014 Amborella trichopoda HOM05D006240 ORTHO05D007709 4.5e-12 76.3 71 54.9
SGA_v2.0_scaffold54G19644 Striga asiatica HOM05D006240 ORTHO05D007709 1.7e-11 74.3 300 27.7
Atru.chr9.2243 Acer truncatum HOM05D006240 ORTHO05D007709 3.8e-11 73.2 58 62.1
Atru.chr3.2559 Acer truncatum HOM05D006240 ORTHO05D007709 6.5e-11 72.4 56 62.5
Pp3c17_23460 Physcomitrium patens HOM05D006240 ORTHO05D007709 6.5e-11 72.4 230 30.0
SEGI_13318 Sequoiadendron giganteum HOM05D006240 ORTHO05D007709 5.1e-08 62.8 76 48.7
SEGI_19917 Sequoiadendron giganteum HOM05D006240 ORTHO05D007709 5.1e-08 62.8 183 29.5
Mapoly0189s0009 Marchantia polymorpha HOM05D006240 ORTHO05D007709 8.8e-08 62.0 247 28.7
Atru.chr9.2228 Acer truncatum HOM05D000343 ORTHO05D000975 3.7e-06 56.6 41 65.9


User provided reference genes

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