Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 4.8e-260 900.6 435 100.0
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 2.1e-199 699.1 436 79.6
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 2.3e-198 695.7 441 78.2
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 3.4e-165 585.5 436 65.1
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 5.8e-165 584.7 438 66.9
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 2.8e-159 565.8 424 64.9
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 6.2e-159 564.7 435 62.3
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 2.4e-158 562.8 424 63.4
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 6.4e-156 554.7 431 62.9
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.1e-155 553.9 426 64.6
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 1.1e-155 553.9 431 63.6
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 6.6e-153 544.7 431 61.7
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 8.7e-153 544.3 431 61.7
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 7.3e-152 541.2 435 60.9
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 7.3e-152 541.2 422 63.5
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 9.6e-152 540.8 438 58.9
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 9.6e-152 540.8 425 62.6
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 2.1e-151 539.7 425 61.6
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 2.8e-151 539.3 432 62.0
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 6.2e-151 538.1 424 62.0
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 1.4e-150 537.0 424 61.6
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 3.1e-150 535.8 433 62.1
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 5.3e-150 535.0 425 62.6
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 1.2e-149 533.9 424 61.3
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.2e-149 533.9 433 61.7
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 2.0e-149 533.1 432 60.2
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 9.9e-149 530.8 426 62.0
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 2.2e-148 529.6 424 61.6
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 6.4e-148 528.1 434 61.1
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 8.4e-148 527.7 438 59.4
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 1.9e-147 526.6 431 60.8
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 4.2e-147 525.4 431 59.6
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 7.8e-146 521.2 431 59.6
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 1.7e-145 520.0 442 58.4
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 3.0e-145 519.2 428 60.5
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 3.0e-145 519.2 428 60.5
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 3.0e-145 519.2 428 60.5
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 3.9e-145 518.8 431 59.2
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 5.1e-145 518.5 436 59.4
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 2.5e-144 516.2 428 60.5
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 2.5e-144 516.2 346 67.3
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 4.3e-144 515.4 427 58.3
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 9.6e-144 514.2 346 67.3
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 1.3e-143 513.8 428 60.0
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 1.6e-143 513.5 430 59.8
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 2.8e-143 512.7 428 60.3
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 3.6e-143 512.3 433 57.0
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 3.6e-143 512.3 430 59.8
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 4.8e-143 511.9 358 67.0
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 1.1e-142 510.8 345 66.7
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 1.1e-142 510.8 418 61.0
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.4e-142 510.4 430 57.9
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 1.8e-142 510.0 397 60.5
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 4.0e-142 508.8 424 59.4
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 5.3e-142 508.4 434 56.5
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 6.9e-142 508.1 429 59.0
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 6.9e-142 508.1 428 58.9
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 6.9e-142 508.1 434 57.8
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 9.0e-142 507.7 428 58.9
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 9.0e-142 507.7 437 57.0
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 9.0e-142 507.7 437 56.3
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 1.2e-141 507.3 428 58.9
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 1.2e-141 507.3 425 58.1
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 1.2e-141 507.3 425 58.1
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.5e-141 506.9 434 56.2
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 5.8e-141 505.0 435 58.6
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 5.8e-141 505.0 427 57.1
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 5.8e-141 505.0 427 56.9
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 5.8e-141 505.0 446 55.6
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 7.6e-141 504.6 428 59.3
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 7.6e-141 504.6 428 59.3
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 7.6e-141 504.6 428 59.3
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 7.6e-141 504.6 433 59.1
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 2.9e-140 502.7 425 59.1
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 4.9e-140 501.9 430 58.8
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 6.4e-140 501.5 432 59.0
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 8.4e-140 501.1 432 57.6
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 2.4e-139 499.6 428 58.2
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 2.4e-139 499.6 425 57.6
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 4.2e-139 498.8 429 58.0
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 7.1e-139 498.0 445 55.7
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 9.3e-139 497.7 426 58.5
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 9.3e-139 497.7 424 58.5
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 1.2e-138 497.3 426 58.5
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 1.6e-138 496.9 425 58.8
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 2.1e-138 496.5 423 58.4
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.0e-137 494.2 433 55.2
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.3e-137 493.8 427 56.2
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 1.8e-137 493.4 343 64.7
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 3.9e-137 492.3 425 57.2
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 3.9e-137 492.3 362 62.7
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 5.1e-137 491.9 393 62.1
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 6.7e-137 491.5 428 56.1
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 1.1e-136 490.7 426 55.9
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 1.5e-136 490.3 424 55.9
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 5.6e-136 488.4 428 55.8
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 9.6e-136 487.6 392 59.7
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 1.6e-135 486.9 430 56.3
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 1.8e-134 483.4 389 59.4
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 5.3e-134 481.9 435 55.6
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 9.0e-134 481.1 345 63.2
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 1.2e-133 480.7 384 61.2
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 3.4e-133 479.2 346 62.4
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 4.5e-133 478.8 431 55.5
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 4.5e-133 478.8 425 55.8
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 4.9e-132 475.3 346 63.3
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 8.4e-132 474.6 349 61.9
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 1.9e-131 473.4 451 53.2
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 5.5e-131 471.9 344 62.2
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 4.6e-130 468.8 428 56.8
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 6.0e-130 468.4 424 55.2
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 1.5e-128 463.8 430 56.0
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 5.7e-128 461.8 425 53.4
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 1.3e-127 460.7 424 52.8
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 4.8e-127 458.8 348 60.1
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 1.8e-126 456.8 426 55.9
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 4.0e-126 455.7 333 62.2
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 1.5e-125 453.8 346 60.7
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 2.6e-125 453.0 431 54.5
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 7.6e-125 451.4 424 52.6
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 3.8e-124 449.1 438 53.2
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 3.5e-122 442.6 347 61.4
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 1.8e-121 440.3 431 53.6
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 2.3e-121 439.9 426 53.8
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 3.9e-121 439.1 425 54.6
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 5.1e-121 438.7 341 58.4
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 9.7e-120 434.5 435 52.0
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 1.3e-119 434.1 441 51.2
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 1.8e-118 430.3 430 51.6
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 1.8e-118 430.3 427 52.0
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 4.1e-118 429.1 421 54.2
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 6.9e-118 428.3 367 56.1
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 5.0e-116 422.2 350 56.9
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 7.2e-115 418.3 449 50.6
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.7e-114 416.4 340 56.8
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 7.9e-114 414.8 427 49.6
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 3.9e-113 412.5 291 64.9
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 3.9e-113 412.5 340 56.5
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.4e-105 387.5 379 52.5
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 5.9e-101 372.1 347 50.4
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 5.0e-100 369.0 250 67.2
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 7.2e-99 365.2 369 48.0
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 1.2e-98 364.4 303 57.1
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 1.4e-97 360.9 347 49.0
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 1.5e-96 357.5 239 67.4
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 2.0e-96 357.1 428 46.5
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 1.3e-95 354.4 249 63.5
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 4.8e-95 352.4 345 48.7
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 6.3e-95 352.1 345 48.1
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 5.5e-91 339.0 358 47.2
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 1.2e-90 337.8 338 47.0
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 6.1e-90 335.5 345 47.2
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 1.4e-89 334.3 277 62.1
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.4e-89 334.3 399 43.9
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 2.3e-89 333.6 338 47.6
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 8.8e-89 331.6 241 62.2
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 1.2e-88 331.3 341 46.3
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 7.2e-83 312.0 433 43.4
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 4.4e-80 302.8 237 55.3
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 3.8e-76 289.7 237 53.6
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 5.5e-75 285.8 346 39.9
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 2.8e-74 283.5 346 41.3
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 4.7e-74 282.7 343 42.0
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 8.9e-73 278.5 340 39.7
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 8.3e-71 271.9 378 38.9
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 4.1e-70 269.6 299 43.8
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 5.9e-69 265.8 415 37.6
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 1.5e-64 251.1 241 46.1
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.6e-61 241.1 343 36.7
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 1.5e-56 224.6 352 36.1
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 5.2e-41 172.9 152 56.6
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 1.9e-38 164.5 154 53.9
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 1.1e-35 155.2 417 26.9
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.6e-21 108.2 132 40.2
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 3.0e-20 104.0 126 41.3
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.3e-18 98.6 122 50.0
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 1.8e-17 94.7 85 47.1
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.2e-15 87.8 118 37.3
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 2.5e-14 84.3 79 40.5
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 3.0e-12 77.4 107 42.1
ATR0555G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.6e-08 64.3 65 41.5
Prupe.6G163800 Prunus persica HOM05D003764 ORTHO05D335910 7.6e-08 62.8 47 68.1


User provided reference genes

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