Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG11G018420 Citrullus lanatus HOM05D000461 ORTHO05D009768 3.5e-244 847.8 421 100.0
Sed0023337 Sechium edule HOM05D000461 ORTHO05D009768 1.8e-224 782.3 454 86.8
CsaV3_3G044400 Cucumis sativus L. HOM05D000461 ORTHO05D009768 2.0e-218 762.3 455 85.7
RcHm_v2.0_Chr5g0035161 Rosa chinensis HOM05D000461 ORTHO05D009768 3.0e-195 685.3 455 75.4
MD03G1220100 Malus domestica HOM05D000461 ORTHO05D009768 1.5e-194 682.9 453 75.3
Potri.011G127400 Populus trichocarpa HOM05D000461 ORTHO05D009768 1.3e-193 679.9 454 75.8
Prupe.4G188800 Prunus persica HOM05D000461 ORTHO05D009768 6.3e-193 677.6 453 74.2
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 1.2e-191 673.3 450 76.0
QL93p2023_0115 Quercus lobata HOM05D000461 ORTHO05D009768 1.6e-191 672.9 466 73.8
Ca_17659_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009768 3.5e-191 671.8 453 74.6
Medtr8g093250 Medicago truncatula HOM05D000461 ORTHO05D009768 1.3e-190 669.8 453 74.2
Lj3g0022224 Lotus japonicus HOM05D000461 ORTHO05D009768 5.0e-190 667.9 446 75.6
TAR626G0736 Trochodendron aralioides HOM05D000461 ORTHO05D009768 8.6e-190 667.2 452 74.8
MELO3C018201.2 Cucumis melo HOM05D000461 ORTHO05D009768 2.5e-189 665.6 457 78.6
Hma1.2p1_1003F.1_g246700 Hydrangea macrophylla HOM05D000461 ORTHO05D009768 2.5e-189 665.6 446 76.0
TPR.G37406 Trifolium pratense HOM05D000461 ORTHO05D009768 4.3e-189 664.8 453 73.7
Dinv08334 Davidia involucrata HOM05D000461 ORTHO05D009768 7.3e-189 664.1 448 75.0
Manes.03G115700 Manihot esculenta HOM05D000461 ORTHO05D009768 9.5e-189 663.7 453 75.5
Sopen07g031690 Solanum pennellii HOM05D000461 ORTHO05D009768 2.1e-188 662.5 444 75.5
FvH4_3g20850 Fragaria vesca HOM05D000461 ORTHO05D009768 3.6e-188 661.8 456 73.5
Solyc07g063510.3 Solanum lycopersicum HOM05D000461 ORTHO05D009768 3.6e-188 661.8 444 75.5
Lalb_Chr19g0134451 Lupinus albus HOM05D000461 ORTHO05D009768 8.0e-188 660.6 455 74.1
Glyma.12G147900 Glycine max HOM05D000461 ORTHO05D009768 1.4e-187 659.8 449 75.1
TWI39G0712 Tripterygium wilfordii HOM05D000461 ORTHO05D009768 1.4e-187 659.8 453 74.2
Peaxi162Scf01111g00017 Petunia axillaris HOM05D000461 ORTHO05D009768 2.3e-187 659.1 443 74.5
Gorai.002G075600 Gossypium raimondii HOM05D000461 ORTHO05D009768 6.8e-187 657.5 417 78.9
CANSAT11G0348 Cannabis sativa HOM05D000461 ORTHO05D009768 2.6e-186 655.6 481 70.7
Gohir.D01G055500 Gossypium hirsutum HOM05D000461 ORTHO05D009768 4.4e-186 654.8 417 78.4
PGSC0003DMG400019289 Solanum tuberosum HOM05D000461 ORTHO05D009768 5.7e-186 654.4 444 74.5
Atru.chr2.2833 Acer truncatum HOM05D000461 ORTHO05D009768 9.8e-186 653.7 404 80.7
arahy.Tifrunner.gnm1.ann1.58XN2N Arachis hypogaea HOM05D000461 ORTHO05D009768 4.9e-185 651.4 474 71.3
arahy.Tifrunner.gnm1.ann1.QNW6LA Arachis hypogaea HOM05D000461 ORTHO05D009768 6.4e-185 651.0 474 71.3
VMungo1127G1042 Vigna mungo HOM05D000461 ORTHO05D009768 6.4e-185 651.0 427 76.3
Nn1g03933 Nelumbo nucifera HOM05D000461 ORTHO05D009768 8.3e-185 650.6 459 72.1
QL08p018730 Quercus lobata HOM05D000461 ORTHO05D009768 1.4e-184 649.8 515 66.8
Phvul.011G154500 Phaseolus vulgaris HOM05D000461 ORTHO05D009768 3.2e-184 648.7 410 78.8
ECA236G2753 Erigeron canadensis HOM05D000461 ORTHO05D009768 4.1e-184 648.3 432 75.5
Migut.M00870 Erythranthe guttata HOM05D000461 ORTHO05D009768 4.1e-184 648.3 458 73.1
Nitab4.5_0002565g0060 Nicotiana tabacum HOM05D000461 ORTHO05D009768 2.0e-183 646.0 433 75.3
MSTRG.6849 Avicennia marina HOM05D000461 ORTHO05D009768 2.7e-183 645.6 455 73.2
CAN.G162.98 Capsicum annuum HOM05D000461 ORTHO05D009768 2.7e-183 645.6 412 78.4
Lsat_1_v5_gn_7_106360 Lactuca sativa HOM05D000461 ORTHO05D009768 3.5e-183 645.2 445 73.5
Eucgr.H00422 Eucalyptus grandis HOM05D000461 ORTHO05D009768 1.7e-182 642.9 428 76.2
Cpa.g.sc80.105 Carica papaya HOM05D000461 ORTHO05D009768 3.0e-182 642.1 405 80.0
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 3.9e-182 641.7 451 73.2
Thecc.07G073000 Theobroma cacao HOM05D000461 ORTHO05D009768 6.6e-182 641.0 423 76.4
HanXRQChr11g0330921 Helianthus annuus HOM05D000461 ORTHO05D009768 8.6e-182 640.6 423 75.4
Sc03g0009640 Simmondsia chinensis HOM05D000461 ORTHO05D009768 8.6e-182 640.6 454 71.4
SGA_v2.0_scaffold34G13718 Striga asiatica HOM05D000461 ORTHO05D009768 2.5e-181 639.0 429 74.6
Cc05_g12580 Coffea canephora HOM05D000461 ORTHO05D009768 4.3e-181 638.3 426 75.6
Rhsim04G0018400 Rhododendron simsii HOM05D000461 ORTHO05D009768 7.3e-181 637.5 473 69.3
MBI02_g10553_MAGBIO Magnolia biondii HOM05D000461 ORTHO05D009768 3.6e-180 635.2 466 70.4
Ah.04g164990 Amaranthus hybridus HOM05D000461 ORTHO05D009768 1.1e-179 633.6 453 71.5
vmacro09551 Vaccinium macrocarpon HOM05D000461 ORTHO05D009768 4.9e-177 624.8 474 68.4
Haze_09517 Corylus avellana HOM05D000461 ORTHO05D009768 1.6e-175 619.8 450 71.8
AUR62029323 Chenopodium quinoa HOM05D000461 ORTHO05D009768 1.1e-173 613.6 442 70.8
Duzib213G0388 Durio zibethinus HOM05D000461 ORTHO05D009768 7.3e-173 610.9 433 71.8
HPP92_016586 Vanilla planifolia HOM05D000461 ORTHO05D009768 7.3e-173 610.9 429 70.6
AUR62015610 Chenopodium quinoa HOM05D000461 ORTHO05D009768 6.8e-171 604.4 496 64.7
SalBow8G3533 Salvia bowleyana HOM05D000461 ORTHO05D009768 8.9e-171 604.0 458 69.0
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 2.0e-170 602.8 439 71.3
CiPaw.11G175300 Carya illinoinensis HOM05D000461 ORTHO05D009768 5.4e-168 594.7 370 80.0
EL10Ac4g08080 Beta vulgaris HOM05D000461 ORTHO05D009768 2.5e-165 585.9 434 69.8
Zm00001eb069190 Zea mays HOM05D000461 ORTHO05D009768 3.3e-165 585.5 451 66.5
SEGI_18811 Sequoiadendron giganteum HOM05D000461 ORTHO05D009768 2.1e-164 582.8 453 64.0
unitig_747.g21565 Utricularia gibba HOM05D000461 ORTHO05D009768 4.4e-162 575.1 444 66.2
Lj1C852T3 Lonicera japonica HOM05D000461 ORTHO05D009768 8.4e-161 570.9 413 71.9
Nitab4.5_0000297g0070 Nicotiana tabacum HOM05D000461 ORTHO05D009768 3.2e-160 568.9 418 71.3
Mapoly0032s0012 Marchantia polymorpha HOM05D000461 ORTHO05D009768 1.3e-158 563.5 416 65.6
Hund27427 Selenicereus undatus HOM05D000461 ORTHO05D009768 3.9e-158 562.0 442 66.7
Psat7g047120 Pisum sativum HOM05D000461 ORTHO05D009768 6.2e-156 554.7 348 79.0
Pp3c15_6180 Physcomitrium patens HOM05D000461 ORTHO05D009768 1.1e-152 543.9 450 61.1
CDE12G0333 Ceratophyllum demersum HOM05D000461 ORTHO05D009768 1.0e-150 537.3 330 78.8
SMO137G0173 Selaginella moellendorffii HOM05D000461 ORTHO05D009768 3.1e-147 525.8 408 63.2
AagrBONN_evm.TU.Sc2ySwM_344.1693 Anthoceros agrestis HOM05D000461 ORTHO05D009768 4.0e-147 525.4 461 57.7
Oeu019359.1 Olea europaea HOM05D000461 ORTHO05D009768 1.7e-145 520.0 345 76.5
CBR_g31136 Chara braunii HOM05D000461 ORTHO05D009768 2.4e-139 499.6 411 58.9
Cre06.g301650 Chlamydomonas reinhardtii HOM05D000461 ORTHO05D009768 5.9e-122 441.8 408 54.9
PRCOL_00003908 Prasinoderma coloniale HOM05D000461 ORTHO05D009768 1.4e-110 404.1 386 55.7
Glyma.06G253602 Glycine max HOM05D000461 ORTHO05D009768 1.1e-101 374.4 243 75.7
Gohir.A01G068201 Gossypium hirsutum HOM05D000461 ORTHO05D009768 3.0e-86 323.2 200 80.5
GSVIVG01014420001 Vitis vinifera HOM05D000461 ORTHO05D009768 1.3e-84 317.8 228 71.1
Zm00001eb291490 Zea mays HOM05D000461 ORTHO05D009768 4.4e-77 292.7 183 76.5
Zm00001eb057620 Zea mays HOM05D000461 ORTHO05D009768 1.3e-76 291.2 183 76.0
Zm00001eb222780 Zea mays HOM05D000461 ORTHO05D009768 1.3e-76 291.2 183 76.0
Zm00001eb308580 Zea mays HOM05D000461 ORTHO05D009768 1.3e-76 291.2 183 76.0
ATR0274G001 Amborella trichopoda HOM05D000461 ORTHO05D009768 4.6e-66 256.1 146 84.9
Os04g0636300 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009768 1.3e-49 201.4 154 66.9
Gohir.A01G068251 Gossypium hirsutum HOM05D000461 ORTHO05D009768 5.1e-41 172.9 140 67.1
SEGI_34047 Sequoiadendron giganteum HOM05D000461 ORTHO05D009768 1.1e-38 165.2 219 46.1
GSVIVG01014419001 Vitis vinifera HOM05D000461 ORTHO05D009768 6.4e-36 156.0 135 63.7
arahy.Tifrunner.gnm1.ann1.AV15VC Arachis hypogaea HOM05D000296 ORTHO05D000175 8.2e-15 85.9 44 93.2
Lalb_Chr19g0134431 Lupinus albus HOM05D000461 ORTHO05D038317 2.5e-11 74.3 89 49.4
ATR0693G093 Amborella trichopoda HOM05D000461 ORTHO05D038317 7.1e-11 72.8 90 50.0
SEGI_16587 Sequoiadendron giganteum HOM05D000415 ORTHO05D385778 7.4e-08 62.8 47 59.6


User provided reference genes

Program Settings