Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG11G017320 Citrullus lanatus HOM05D008148 ORTHO05D010295 7.3e-30 133.3 69 100.0
CsaV3_4G032950 Cucumis sativus L. HOM05D008148 ORTHO05D010295 3.9e-23 110.9 69 82.6
MELO3C025654.2 Cucumis melo HOM05D008148 ORTHO05D010295 8.6e-23 109.8 69 81.2
Sed0019666 Sechium edule HOM05D008148 ORTHO05D010295 1.5e-22 109.0 69 78.3
Atru.chr2.2119 Acer truncatum HOM05D008148 ORTHO05D010295 7.3e-14 80.1 69 62.3
CiPaw.11G159800 Carya illinoinensis HOM05D008148 ORTHO05D010295 1.4e-12 75.9 69 59.4
Manes.15G095500 Manihot esculenta HOM05D008148 ORTHO05D010295 1.4e-12 75.9 49 73.5
Potri.011G109100 Populus trichocarpa HOM05D008148 ORTHO05D010295 2.0e-11 72.0 68 55.9
Eucgr.F03276 Eucalyptus grandis HOM05D008148 ORTHO05D010295 2.6e-11 71.6 65 56.9
Sabra11G0096700 Salix brachista HOM05D008148 ORTHO05D010295 2.6e-11 71.6 68 55.9
PGR031G2401 Punica granatum HOM05D008148 ORTHO05D010295 4.5e-11 70.9 47 72.3
Cpa.g.sc77.20 Carica papaya HOM05D008148 ORTHO05D010295 1.3e-10 69.3 72 55.6
Thecc.07G117800 Theobroma cacao HOM05D008148 ORTHO05D010295 1.3e-10 69.3 69 56.5
Gohir.A01G053800 Gossypium hirsutum HOM05D008148 ORTHO05D010295 2.2e-10 68.6 69 55.1
Gohir.D01G042712 Gossypium hirsutum HOM05D008148 ORTHO05D010295 2.9e-10 68.2 69 55.1
Gorai.002G054100 Gossypium raimondii HOM05D008148 ORTHO05D010295 2.9e-10 68.2 69 55.1
MD11G1264400 Malus domestica HOM05D008148 ORTHO05D010295 2.9e-10 68.2 64 53.1
Prupe.4G163600 Prunus persica HOM05D008148 ORTHO05D010295 2.9e-10 68.2 50 62.0
RcHm_v2.0_Chr5g0030781 Rosa chinensis HOM05D008148 ORTHO05D010295 2.9e-10 68.2 50 62.0
THA.LOC104812318 Tarenaya hassleriana HOM05D008148 ORTHO05D010295 3.8e-10 67.8 67 53.7
AT1G16916 Arabidopsis thaliana HOM05D008148 ORTHO05D010295 4.9e-10 67.4 62 53.2
Prupe.4G164100 Prunus persica HOM05D008148 ORTHO05D010295 4.9e-10 67.4 57 59.6
arahy.Tifrunner.gnm1.ann1.MJJR0W Arachis hypogaea HOM05D008148 ORTHO05D010295 6.4e-10 67.0 49 65.3
Duzib213G0597 Durio zibethinus HOM05D008148 ORTHO05D010295 8.4e-10 66.6 58 55.2
arahy.Tifrunner.gnm1.ann1.GBF3HF Arachis hypogaea HOM05D008148 ORTHO05D010295 1.4e-09 65.9 58 56.9
COL.COLO4_17536 Corchorus olitorius HOM05D008148 ORTHO05D010295 1.4e-09 65.9 54 61.1
Thhalv10009282m.g Eutrema salsugineum HOM05D008148 ORTHO05D010295 2.4e-09 65.1 64 51.6
AL1G29090 Arabidopsis lyrata HOM05D008148 ORTHO05D010295 3.2e-09 64.7 46 63.0
CARHR017420 Cardamine hirsuta HOM05D008148 ORTHO05D010295 3.2e-09 64.7 64 50.0
Ca_03959_v3 Cicer arietinum L. HOM05D008148 ORTHO05D010295 3.2e-09 64.7 70 48.6
Actinidia12583 Actinidia chinensis HOM05D008148 ORTHO05D010295 4.2e-09 64.3 71 52.1
FAN11G2091 Fragaria x ananassa HOM05D008148 ORTHO05D010295 5.4e-09 63.9 64 50.0
Sp1g15050 Schrenkiella parvula HOM05D008148 ORTHO05D010295 5.4e-09 63.9 64 51.6
Glyma.13G269300 Glycine max HOM05D008148 ORTHO05D010295 7.1e-09 63.5 59 55.9
Medtr2g076020 Medicago truncatula HOM05D008148 ORTHO05D010295 7.1e-09 63.5 62 46.8
Sc03g0010550 Simmondsia chinensis HOM05D008148 ORTHO05D010295 9.3e-09 63.2 65 49.2
TPR.G16053 Trifolium pratense HOM05D008148 ORTHO05D010295 1.2e-08 62.8 50 54.0
CSS0001630 Camellia sinensis var. sinensis HOM05D008148 ORTHO05D010295 1.6e-08 62.4 69 50.7
Glyma.12G230300 Glycine max HOM05D008148 ORTHO05D010295 1.6e-08 62.4 47 61.7
BcaC07g41389 Brassica carinata HOM05D008148 ORTHO05D010295 2.7e-08 61.6 64 50.0
Carub.0001s1665 Capsella rubella HOM05D008148 ORTHO05D010295 2.7e-08 61.6 65 52.3
Lalb_Chr25g0285821 Lupinus albus HOM05D008148 ORTHO05D010295 2.7e-08 61.6 63 47.6
Psat5g237240 Pisum sativum HOM05D008148 ORTHO05D010295 3.5e-08 61.2 62 46.8
FAN21G2680 Fragaria x ananassa HOM05D008148 ORTHO05D010295 6.0e-08 60.5 50 56.0
A09p60700 Brassica napus HOM05D008148 ORTHO05D010295 1.8e-07 58.9 65 49.2
GSVIVG01014187001 Vitis vinifera HOM05D008148 ORTHO05D010295 2.3e-07 58.5 41 68.3
C08p44200 Brassica napus HOM05D008148 ORTHO05D010295 3.0e-07 58.2 65 50.8
Atru.chr1.2298 Acer truncatum HOM05D008148 ORTHO05D010295 3.9e-07 57.8 44 61.4
BraA09t41440Z Brassica rapa HOM05D008148 ORTHO05D010295 8.7e-07 56.6 65 47.7
Lj3g0020996 Lotus japonicus HOM05D008148 ORTHO05D010295 8.7e-07 56.6 47 51.1
Oeu059259.1 Olea europaea HOM05D008148 ORTHO05D010295 1.1e-06 56.2 67 49.3
Cc05_g11020 Coffea canephora HOM05D008148 ORTHO05D010295 1.5e-06 55.8 67 47.8
DCAR_013159 Daucus carota HOM05D008148 ORTHO05D010295 1.5e-06 55.8 44 59.1
Phvul.005G081700 Phaseolus vulgaris HOM05D008148 ORTHO05D010295 3.3e-06 54.7 44 52.3
Migut.M00719 Erythranthe guttata HOM05D008148 ORTHO05D010295 9.6e-06 53.1 48 54.2
FAN25G0037 Fragaria x ananassa HOM05D008148 ORTHO05D010295 9.6e-06 53.1 53 50.9


User provided reference genes

Program Settings