Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG11G016310 Citrullus lanatus HOM05D007146 ORTHO05D008971 0.0e+00 1153.3 574 100.0
CsaV3_2G022170 Cucumis sativus L. HOM05D007146 ORTHO05D008971 1.0e-294 1016.1 573 88.1
Sed0009835 Sechium edule HOM05D007146 ORTHO05D008971 1.7e-265 919.1 574 82.4
MELO3C010557.2 Cucumis melo HOM05D007146 ORTHO05D008971 2.4e-243 845.5 591 75.8
Atru.chr2.1879 Acer truncatum HOM05D007146 ORTHO05D008971 1.9e-187 659.8 584 59.2
CiPaw.11G069000 Carya illinoinensis HOM05D007146 ORTHO05D008971 2.1e-186 656.4 576 59.7
MD05G1215600 Malus domestica HOM05D007146 ORTHO05D008971 4.6e-186 655.2 583 59.2
RcHm_v2.0_Chr5g0027001 Rosa chinensis HOM05D007146 ORTHO05D008971 4.3e-184 648.7 578 59.2
Prupe.4G143400 Prunus persica HOM05D007146 ORTHO05D008971 3.6e-183 645.6 582 57.9
FvH4_3g16020 Fragaria vesca HOM05D007146 ORTHO05D008971 7.6e-181 637.9 581 57.7
FAN11G2635 Fragaria x ananassa HOM05D007146 ORTHO05D008971 2.9e-180 636.0 581 58.0
TWI38G0129 Tripterygium wilfordii HOM05D007146 ORTHO05D008971 3.8e-180 635.6 601 56.1
COL.COLO4_05069 Corchorus olitorius HOM05D007146 ORTHO05D008971 2.4e-179 632.9 581 56.8
Lalb_Chr25g0285151 Lupinus albus HOM05D007146 ORTHO05D008971 2.3e-177 626.3 576 55.6
Gorai.004G269700 Gossypium raimondii HOM05D007146 ORTHO05D008971 1.1e-176 624.0 583 56.8
Eucgr.F01450 Eucalyptus grandis HOM05D007146 ORTHO05D008971 1.5e-176 623.6 557 59.2
Glyma.08G173200 Glycine max HOM05D007146 ORTHO05D008971 2.5e-176 622.9 569 56.8
Phvul.005G055600 Phaseolus vulgaris HOM05D007146 ORTHO05D008971 2.5e-176 622.9 570 55.8
CSS0042492 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 4.3e-176 622.1 565 57.9
Lj3g0000430 Lotus japonicus HOM05D007146 ORTHO05D008971 2.1e-175 619.8 572 56.5
CSS0033590 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 2.8e-175 619.4 608 54.1
Potri.007G065300 Populus trichocarpa HOM05D007146 ORTHO05D008971 2.8e-175 619.4 579 56.3
TPR.G9764 Trifolium pratense HOM05D007146 ORTHO05D008971 8.1e-175 617.8 570 56.0
GSVIVG01020477001 Vitis vinifera HOM05D007146 ORTHO05D008971 1.1e-174 617.5 564 56.6
PGR083G2275 Punica granatum HOM05D007146 ORTHO05D008971 3.4e-173 612.5 558 57.7
Sabra07G0052900 Salix brachista HOM05D007146 ORTHO05D008971 6.4e-172 608.2 578 55.5
Rhsim06G0237700 Rhododendron simsii HOM05D007146 ORTHO05D008971 3.2e-171 605.9 621 53.1
Medtr2g064450 Medicago truncatula HOM05D007146 ORTHO05D008971 1.6e-170 603.6 576 54.7
FAN25G2803 Fragaria x ananassa HOM05D007146 ORTHO05D008971 1.3e-169 600.5 558 57.5
Nn7g37748 Nelumbo nucifera HOM05D007146 ORTHO05D008971 1.8e-169 600.1 587 54.9
THA.LOC104812351 Tarenaya hassleriana HOM05D007146 ORTHO05D008971 1.8e-169 600.1 559 56.9
DCAR_009636 Daucus carota HOM05D007146 ORTHO05D008971 6.7e-169 598.2 581 55.2
A06p12640 Brassica napus HOM05D007146 ORTHO05D008971 1.4e-166 590.5 563 55.8
CAN.G943.29 Capsicum annuum HOM05D007146 ORTHO05D008971 6.9e-166 588.2 563 54.5
Cc05_g15970 Coffea canephora HOM05D007146 ORTHO05D008971 2.6e-165 586.3 589 52.3
Sopen07g034520 Solanum pennellii HOM05D007146 ORTHO05D008971 3.4e-165 585.9 557 55.1
vmacro11655 Vaccinium macrocarpon HOM05D007146 ORTHO05D008971 4.5e-165 585.5 640 51.4
AT1G16650 Arabidopsis thaliana HOM05D007146 ORTHO05D008971 5.8e-165 585.1 559 54.6
C05p14940 Brassica napus HOM05D007146 ORTHO05D008971 7.6e-165 584.7 559 54.9
Solyc07g066340.3 Solanum lycopersicum HOM05D007146 ORTHO05D008971 1.3e-164 583.9 562 55.2
BolC5t30209H Brassica oleracea HOM05D007146 ORTHO05D008971 8.4e-164 581.3 560 55.0
Thhalv10007372m.g Eutrema salsugineum HOM05D007146 ORTHO05D008971 8.4e-164 581.3 560 54.3
PGSC0003DMG401022133 Solanum tuberosum HOM05D007146 ORTHO05D008971 9.3e-163 577.8 557 53.7
Aa31LG7G1140 Aethionema arabicum HOM05D007146 ORTHO05D008971 1.6e-162 577.0 558 54.3
arahy.Tifrunner.gnm1.ann1.5W7G8A Arachis hypogaea HOM05D007146 ORTHO05D008971 6.0e-162 575.1 613 50.4
SalBow8G2846 Salvia bowleyana HOM05D007146 ORTHO05D008971 1.3e-161 573.9 562 53.0
AL1G28820 Arabidopsis lyrata HOM05D007146 ORTHO05D008971 5.1e-161 572.0 559 54.4
Carub.0001s1639 Capsella rubella HOM05D007146 ORTHO05D008971 5.1e-161 572.0 560 53.9
BcaC05g25529 Brassica carinata HOM05D007146 ORTHO05D008971 8.7e-161 571.2 567 54.0
BraA06t24425Z Brassica rapa HOM05D007146 ORTHO05D008971 1.5e-160 570.5 579 53.4
arahy.Tifrunner.gnm1.ann1.L14HV7 Arachis hypogaea HOM05D007146 ORTHO05D008971 7.4e-160 568.2 613 49.8
Aqoxy4G00043_Aqoxy4G00044 Aquilegia oxysepala HOM05D007146 ORTHO05D008971 3.1e-158 562.8 590 50.7
PSO675G2245 Papaver somniferum HOM05D007146 ORTHO05D008971 1.5e-157 560.5 585 52.1
Peaxi162Scf00232g01133 Petunia axillaris HOM05D007146 ORTHO05D008971 2.0e-157 560.1 557 53.3
Oeu002808.1 Olea europaea HOM05D007146 ORTHO05D008971 2.9e-156 556.2 659 48.7
HanXRQChr05g0160631 Helianthus annuus HOM05D007146 ORTHO05D008971 3.8e-156 555.8 557 52.1
Manes.03G082700 Manihot esculenta HOM05D007146 ORTHO05D008971 5.0e-156 555.4 572 52.6
SGA_v2.0_scaffold186G40227 Striga asiatica HOM05D007146 ORTHO05D008971 5.0e-156 555.4 571 52.7
PSO541G2405 Papaver somniferum HOM05D007146 ORTHO05D008971 5.5e-155 552.0 592 51.9
FAN21G1125 Fragaria x ananassa HOM05D007146 ORTHO05D008971 3.1e-150 536.2 521 55.5
Gohir.D08G252900 Gossypium hirsutum HOM05D007146 ORTHO05D008971 1.2e-149 534.3 523 54.9
HPP92_018693 Vanilla planifolia HOM05D007146 ORTHO05D008971 3.4e-149 532.7 595 51.1
ATR1098G072 Amborella trichopoda HOM05D007146 ORTHO05D008971 2.5e-147 526.6 589 48.0
VMungo1080G0158 Vigna mungo HOM05D007146 ORTHO05D008971 8.8e-145 518.1 513 53.2
EL10Ac4g08556 Beta vulgaris HOM05D007146 ORTHO05D008971 7.4e-144 515.0 526 52.1
Os12g0610500 Oryza sativa ssp. japonica HOM05D007146 ORTHO05D008971 1.3e-140 504.2 596 47.5
Duzib213G0540 Durio zibethinus HOM05D007146 ORTHO05D008971 2.9e-140 503.1 536 52.4
Lsat_1_v5_gn_9_46800 Lactuca sativa HOM05D007146 ORTHO05D008971 1.1e-139 501.1 589 47.4
HPP92_018676 Vanilla planifolia HOM05D007146 ORTHO05D008971 2.7e-138 496.5 531 52.5
MBI02_g25677_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 1.4e-137 494.2 541 49.5
Nitab4.5_0002933g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 1.9e-131 473.8 563 47.8
Psat1g002520 Pisum sativum HOM05D007146 ORTHO05D008971 7.2e-131 471.9 411 58.2
Gohir.A08G232700 Gossypium hirsutum HOM05D007146 ORTHO05D008971 7.0e-126 455.3 521 48.6
Zm00001eb135900 Zea mays HOM05D007146 ORTHO05D008971 5.0e-124 449.1 513 49.7
unitig_749.g13702 Utricularia gibba HOM05D007146 ORTHO05D008971 7.0e-118 428.7 585 43.8
Nitab4.5_0000313g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 1.6e-117 427.6 388 56.7
Pp3c14_6050 Physcomitrium patens HOM05D007146 ORTHO05D008971 1.5e-112 411.0 579 41.6
Pp3c1_21800 Physcomitrium patens HOM05D007146 ORTHO05D008971 1.9e-107 394.0 611 38.5
SMO143G0033 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 2.5e-99 367.1 550 39.5
TAR627G0841 Trochodendron aralioides HOM05D007146 ORTHO05D008971 2.5e-99 367.1 373 54.2
Migut.M01565 Erythranthe guttata HOM05D007146 ORTHO05D008971 5.6e-99 365.9 364 53.6
Ah.06g187050 Amaranthus hybridus HOM05D007146 ORTHO05D008971 2.0e-96 357.5 451 44.1
Ciclev10021587m.g Citrus clementina HOM05D007146 ORTHO05D008971 1.5e-91 341.3 296 60.5
Lj8C186T10 Lonicera japonica HOM05D007146 ORTHO05D008971 6.8e-89 332.4 370 50.8
Sp1g14790 Schrenkiella parvula HOM05D007146 ORTHO05D008971 1.3e-87 328.2 352 51.7
Thecc.07G156000 Theobroma cacao HOM05D007146 ORTHO05D008971 9.2e-86 322.0 295 59.0
AagrBONN_evm.TU.Sc2ySwM_368.537 Anthoceros agrestis HOM05D007146 ORTHO05D008971 3.0e-84 317.0 436 42.7
MSTRG.16117 Avicennia marina HOM05D007146 ORTHO05D008971 3.9e-76 290.0 304 51.6
CDE03G0452 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 3.8e-71 273.5 430 40.9
Thecc.07G156300 Theobroma cacao HOM05D007146 ORTHO05D008971 1.4e-70 271.6 247 57.1
AUR62041925 Chenopodium quinoa HOM05D007146 ORTHO05D008971 2.0e-64 251.1 298 48.3
Ca_03693_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 3.8e-63 246.9 212 57.5
Ciclev10022203m.g Citrus clementina HOM05D007146 ORTHO05D008971 2.7e-53 214.2 216 53.2
SEGI_13316 Sequoiadendron giganteum HOM05D007146 ORTHO05D008971 2.1e-50 204.5 239 47.3
Ca_03695_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 1.2e-45 188.7 189 52.4
Ca_03700_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 1.2e-45 188.7 189 52.4
DCAR_002379 Daucus carota HOM05D007146 ORTHO05D008971 1.1e-41 175.6 206 47.1
Cpa.g.sc10.33 Carica papaya HOM05D007146 ORTHO05D008971 1.1e-38 165.6 100 76.0
CARHR017120 Cardamine hirsuta HOM05D007146 ORTHO05D008971 1.4e-38 165.2 163 54.0
Ah.06g187020 Amaranthus hybridus HOM05D007146 ORTHO05D008971 1.2e-37 162.2 175 50.3
Hund10273 Selenicereus undatus HOM05D007146 ORTHO05D008971 8.8e-36 156.0 138 55.1
Cpa.g.sc10.30 Carica papaya HOM05D007146 ORTHO05D008971 2.5e-35 154.5 194 49.5
Sc07g0003080 Simmondsia chinensis HOM05D007146 ORTHO05D008971 2.2e-31 141.4 98 67.3
CDE03G0405 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 2.7e-29 134.4 132 50.0
Hund10306 Selenicereus undatus HOM05D007146 ORTHO05D008971 2.8e-26 124.4 135 54.8
Haze_08528 Corylus avellana HOM05D007146 ORTHO05D008971 2.6e-19 101.3 131 44.3
MBI02_g40068_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 2.7e-13 81.3 148 35.1
SMO246G0022 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 3.7e-10 70.9 70 51.4
Cfa023972 Carpinus fangiana HOM05D007146 ORTHO05D008971 3.1e-09 67.8 346 25.7


User provided reference genes

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