Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG11G015900 Citrullus lanatus HOM05D007332 ORTHO05D009297 1.8e-90 335.9 167 100.0
MELO3C010504.2 Cucumis melo HOM05D007332 ORTHO05D009297 2.1e-67 259.2 165 85.5
CsaV3_4G028070 Cucumis sativus L. HOM05D007332 ORTHO05D009297 2.8e-67 258.8 162 85.8
Sed0015452 Sechium edule HOM05D007332 ORTHO05D009297 1.2e-41 173.7 131 71.0
QL09p033201 Quercus lobata HOM05D007332 ORTHO05D009297 5.7e-36 154.8 192 51.0
TWI34G0633 Tripterygium wilfordii HOM05D007332 ORTHO05D009297 1.4e-34 150.2 183 51.9
Atru.chr13.1537 Acer truncatum HOM05D007332 ORTHO05D009297 7.7e-33 144.4 182 49.5
COL.COLO4_03954 Corchorus olitorius HOM05D007332 ORTHO05D009297 1.7e-32 143.3 205 45.4
Cfa018560 Carpinus fangiana HOM05D007332 ORTHO05D009297 1.9e-31 139.8 178 52.2
CiPaw.15G033700 Carya illinoinensis HOM05D007332 ORTHO05D009297 3.2e-31 139.0 191 51.3
Ciclev10002610m.g Citrus clementina HOM05D007332 ORTHO05D009297 7.2e-31 137.9 185 48.1
Manes.02G166600 Manihot esculenta HOM05D007332 ORTHO05D009297 1.2e-30 137.1 188 47.9
Hma1.2p1_0542F.1_g174970 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 7.9e-30 134.4 186 50.0
Sabra02G0062700 Salix brachista HOM05D007332 ORTHO05D009297 1.0e-29 134.0 181 49.2
FAN27G1631 Fragaria x ananassa HOM05D007332 ORTHO05D009297 2.3e-29 132.9 189 50.3
Dinv27272 Davidia involucrata HOM05D001470 ORTHO05D006430 3.9e-29 132.1 185 47.0
FAN20G0761 Fragaria x ananassa HOM05D007332 ORTHO05D009297 5.1e-29 131.7 189 49.7
Phvul.009G128000 Phaseolus vulgaris HOM05D007332 ORTHO05D009297 8.8e-29 131.0 170 47.6
Duzib093G1986 Durio zibethinus HOM05D007332 ORTHO05D009297 1.5e-28 130.2 198 43.4
Lj1g0005314 Lotus japonicus HOM05D007332 ORTHO05D009297 1.5e-28 130.2 168 51.8
Potri.002G080200 Populus trichocarpa HOM05D007332 ORTHO05D009297 2.0e-28 129.8 212 42.5
Psat5g085840 Pisum sativum HOM05D007332 ORTHO05D009297 2.6e-28 129.4 166 50.6
Duzib116G0046 Durio zibethinus HOM05D007332 ORTHO05D009297 5.7e-28 128.3 194 44.3
Glyma.06G115900 Glycine max HOM05D007332 ORTHO05D009297 9.7e-28 127.5 166 48.2
Glyma.04G246900 Glycine max HOM05D007332 ORTHO05D009297 2.2e-27 126.3 163 49.7
Gohir.D05G239400 Gossypium hirsutum HOM05D007332 ORTHO05D009297 2.2e-27 126.3 197 45.2
CSS0048102 Camellia sinensis var. sinensis HOM05D007332 ORTHO05D009297 2.8e-27 125.9 201 40.3
Gohir.A05G237300 Gossypium hirsutum HOM05D007332 ORTHO05D009297 2.8e-27 125.9 197 45.2
Gorai.009G248200 Gossypium raimondii HOM05D007332 ORTHO05D009297 2.8e-27 125.9 197 45.2
FvH4_2g27560 Fragaria vesca HOM05D007332 ORTHO05D009297 4.8e-27 125.2 189 48.1
FAN24G1344 Fragaria x ananassa HOM05D007332 ORTHO05D009297 6.3e-27 124.8 189 48.1
Gohir.A06G046800 Gossypium hirsutum HOM05D007332 ORTHO05D009297 1.4e-26 123.6 173 47.4
PGSC0003DMG400024564 Solanum tuberosum HOM05D007332 ORTHO05D009297 1.4e-26 123.6 187 45.5
VMungo1309G0081 Vigna mungo HOM05D007332 ORTHO05D009297 2.4e-26 122.9 166 46.4
Sopen03g032530 Solanum pennellii HOM05D007332 ORTHO05D009297 1.2e-25 120.6 194 43.8
arahy.Tifrunner.gnm1.ann1.ILK6IZ Arachis hypogaea HOM05D007332 ORTHO05D009297 1.5e-25 120.2 179 47.5
RcHm_v2.0_Chr6g0296401 Rosa chinensis HOM05D007332 ORTHO05D009297 1.5e-25 120.2 188 46.8
Potri.005G181200 Populus trichocarpa HOM05D007332 ORTHO05D009297 2.6e-25 119.4 191 41.9
TPR.G13457 Trifolium pratense HOM05D007332 ORTHO05D009297 2.6e-25 119.4 167 50.3
Nitab4.5_0006720g0020 Nicotiana tabacum HOM05D007332 ORTHO05D009297 3.4e-25 119.0 189 42.3
Solyc03g113480.1 Solanum lycopersicum HOM05D007332 ORTHO05D009297 3.4e-25 119.0 191 43.5
Medtr3g088400 Medicago truncatula HOM05D007332 ORTHO05D009297 2.9e-24 115.9 169 46.2
CAN.G1486.2 Capsicum annuum HOM05D007332 ORTHO05D009297 6.5e-24 114.8 192 41.7
Ca_16594_v3 Cicer arietinum L. HOM05D007332 ORTHO05D009297 6.5e-24 114.8 140 52.9
PGR044G1395 Punica granatum HOM05D007332 ORTHO05D009297 8.5e-24 114.4 195 41.5
Gorai.010G052700 Gossypium raimondii HOM05D007332 ORTHO05D009297 1.1e-23 114.0 177 46.9
MSTRG.1422 Avicennia marina HOM05D007332 ORTHO05D009297 2.5e-23 112.8 191 44.0
Eucgr.F04333 Eucalyptus grandis HOM05D007332 ORTHO05D009297 2.5e-23 112.8 201 45.3
Nitab4.5_0000111g0100 Nicotiana tabacum HOM05D007332 ORTHO05D009297 4.2e-23 112.1 193 42.5
Dinv14654 Davidia involucrata HOM05D007332 ORTHO05D009297 9.4e-23 110.9 173 43.4
Peaxi162Scf00310g00043 Petunia axillaris HOM05D007332 ORTHO05D009297 9.4e-23 110.9 185 42.7
arahy.Tifrunner.gnm1.ann1.396V4Q Arachis hypogaea HOM05D007332 ORTHO05D009297 2.7e-22 109.4 150 50.0
MD15G1344600 Malus domestica HOM05D007332 ORTHO05D009297 1.0e-21 107.5 189 42.3
Cc10_g12430 Coffea canephora HOM05D007332 ORTHO05D009297 2.3e-21 106.3 207 40.6
TAR381G0705 Trochodendron aralioides HOM05D007332 ORTHO05D009297 3.0e-21 105.9 172 40.1
arahy.Tifrunner.gnm1.ann1.34D5TH Arachis hypogaea HOM05D007332 ORTHO05D009297 5.2e-21 105.1 152 46.7
Sabra05G0137200 Salix brachista HOM05D007332 ORTHO05D009297 1.1e-20 104.0 170 40.6
FAN15G1303 Fragaria x ananassa HOM05D007332 ORTHO05D009297 7.4e-20 101.3 166 46.4
Nn5g28415 Nelumbo nucifera HOM05D007332 ORTHO05D009297 1.3e-19 100.5 169 43.2
Thecc.08G130400 Theobroma cacao HOM05D007332 ORTHO05D009297 1.3e-19 100.5 198 36.4
SalBow7G3495 Salvia bowleyana HOM05D007332 ORTHO05D009297 2.2e-19 99.8 172 41.9
Hma1.2p1_0542F.1_g175020 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 8.2e-19 97.8 154 42.9
ECA232G0093 Erigeron canadensis HOM05D007332 ORTHO05D009297 3.1e-18 95.9 166 44.6
PGSC0003DMG400006046 Solanum tuberosum HOM05D007332 ORTHO05D009297 9.1e-18 94.4 175 41.1
Nn1g08887 Nelumbo nucifera HOM05D007332 ORTHO05D009297 3.5e-17 92.4 199 35.2
Prupe.1G492300 Prunus persica HOM05D007332 ORTHO05D009297 4.5e-17 92.0 189 37.6
SGA_v2.0_scaffold52G18934 Striga asiatica HOM05D007332 ORTHO05D009297 4.5e-17 92.0 184 39.1
Migut.C01053 Erythranthe guttata HOM05D007332 ORTHO05D009297 6.5e-16 88.2 181 39.8
CARHR070880 Cardamine hirsuta HOM05D007332 ORTHO05D009297 4.2e-15 85.5 233 31.3
HanXRQChr09g0260291 Helianthus annuus HOM05D007332 ORTHO05D009297 4.2e-15 85.5 165 38.2
Carub.0002s2429 Capsella rubella HOM05D007332 ORTHO05D009297 5.5e-15 85.1 233 32.2
DCAR_003566 Daucus carota HOM05D007332 ORTHO05D009297 7.2e-15 84.7 189 38.1
MBI06_g33108_MAGBIO Magnolia biondii HOM05D007332 ORTHO05D009297 7.2e-15 84.7 151 39.7
AL2G37600 Arabidopsis lyrata HOM05D007332 ORTHO05D009297 2.1e-14 83.2 227 33.0
BcaB05g25043 Brassica carinata HOM05D007332 ORTHO05D009297 2.1e-14 83.2 220 32.7
AT1G77400 Arabidopsis thaliana HOM05D007332 ORTHO05D009297 3.6e-14 82.4 229 31.4
Lsat_1_v5_gn_4_74261 Lactuca sativa HOM05D007332 ORTHO05D009297 4.7e-14 82.0 163 37.4
Actinidia15225 Actinidia chinensis HOM05D007332 ORTHO05D009297 1.0e-13 80.9 99 53.5
BcaB03g15951 Brassica carinata HOM05D007332 ORTHO05D009297 1.8e-13 80.1 223 30.0
Sp5g32550 Schrenkiella parvula HOM05D007332 ORTHO05D009297 2.3e-13 79.7 224 31.7
THA.LOC104813672 Tarenaya hassleriana HOM05D007332 ORTHO05D009297 3.0e-13 79.3 219 32.4
BcaC08g47611 Brassica carinata HOM05D007332 ORTHO05D009297 5.2e-13 78.6 225 29.3
BolC6t40174H Brassica oleracea HOM05D007332 ORTHO05D009297 5.2e-13 78.6 225 29.3
A07p42920 Brassica napus HOM05D007332 ORTHO05D009297 2.0e-12 76.6 229 28.8
BraA07t31813Z Brassica rapa HOM05D007332 ORTHO05D009297 2.0e-12 76.6 225 30.2
BcaC08g47610 Brassica carinata HOM05D007332 ORTHO05D009297 2.6e-12 76.3 209 31.6
C06p51540 Brassica napus HOM05D007332 ORTHO05D009297 2.6e-12 76.3 225 28.9
C02p17420 Brassica napus HOM05D007332 ORTHO05D009297 4.4e-12 75.5 202 31.2
BolC2t07856H Brassica oleracea HOM05D007332 ORTHO05D009297 4.4e-12 75.5 202 31.2
Aa31LG4G7420 Aethionema arabicum HOM05D007332 ORTHO05D009297 1.7e-11 73.6 225 29.8
Thhalv10019445m.g Eutrema salsugineum HOM05D007332 ORTHO05D009297 3.7e-11 72.4 221 30.3
Lalb_Chr17g0343611 Lupinus albus HOM05D007332 ORTHO05D009297 8.2e-11 71.2 164 40.2
BcaC03g15733 Brassica carinata HOM05D007332 ORTHO05D009297 5.9e-09 65.1 222 31.1
BolC2t09481H Brassica oleracea HOM05D007332 ORTHO05D009297 1.7e-08 63.5 221 31.2
PGSC0003DMG401029181 Solanum tuberosum HOM05D007332 ORTHO05D009297 6.5e-08 61.6 71 54.9
THA.LOC104800214 Tarenaya hassleriana HOM05D007332 ORTHO05D009297 6.5e-08 61.6 146 37.7
CANSAT25G2745 Cannabis sativa HOM05D007332 ORTHO05D009297 8.5e-08 61.2 169 34.9
Aqoxy5G02371 Aquilegia oxysepala HOM05D007332 ORTHO05D009297 4.7e-06 55.5 125 34.4
BraA02t07143Z Brassica rapa HOM05D007332 ORTHO05D009297 6.1e-06 55.1 201 32.3
MBI06_g45442_MAGBIO Magnolia biondii HOM05D007332 ORTHO05D009297 8.0e-06 54.7 156 33.3


User provided reference genes

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