Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG11G015720 Citrullus lanatus HOM05D006879 ORTHO05D008452 2.3e-66 255.4 125 100.0
MELO3C010476.2 Cucumis melo HOM05D006879 ORTHO05D008452 8.5e-53 210.3 124 82.3
CsaV3_4G028290 Cucumis sativus L. HOM05D006879 ORTHO05D008452 4.2e-52 208.0 124 81.5
Sed0023358 Sechium edule HOM05D006879 ORTHO05D008452 2.2e-48 195.7 125 78.4
QL09p034330 Quercus lobata HOM05D006879 ORTHO05D008452 5.2e-42 174.5 127 64.6
QL09p034374 Quercus lobata HOM05D006879 ORTHO05D008452 5.2e-42 174.5 127 64.6
Haze_00431 Corylus avellana HOM05D000586 ORTHO05D008452 6.8e-42 174.1 112 71.4
Thecc.08G126700 Theobroma cacao HOM05D006879 ORTHO05D008452 6.8e-42 174.1 123 65.9
Gohir.D01G180300 Gossypium hirsutum HOM05D006879 ORTHO05D008452 1.5e-41 172.9 123 65.0
Cfa016025 Carpinus fangiana HOM05D006879 ORTHO05D008452 3.4e-41 171.8 112 69.6
FAN20G0093 Fragaria x ananassa HOM05D006879 ORTHO05D008452 3.4e-41 171.8 125 63.2
Gohir.A01G189200 Gossypium hirsutum HOM05D006879 ORTHO05D008452 3.4e-41 171.8 121 65.3
Dinv07211 Davidia involucrata HOM05D006879 ORTHO05D008452 9.8e-41 170.2 120 65.8
COL.COLO4_03398 Corchorus olitorius HOM05D006879 ORTHO05D008452 1.7e-40 169.5 129 62.8
FvH4_2g27080 Fragaria vesca HOM05D006879 ORTHO05D008452 1.7e-40 169.5 125 62.4
CSS0011792 Camellia sinensis var. sinensis HOM05D006879 ORTHO05D008452 2.2e-40 169.1 120 63.3
Dinv27305 Davidia involucrata HOM05D006879 ORTHO05D008452 2.8e-40 168.7 120 64.2
FAN24G0949 Fragaria x ananassa HOM05D006879 ORTHO05D008452 6.3e-40 167.5 125 61.6
Gorai.002G222300 Gossypium raimondii HOM05D006879 ORTHO05D008452 6.3e-40 167.5 123 62.6
Nn5g28321 Nelumbo nucifera HOM05D006879 ORTHO05D008452 1.8e-39 166.0 114 65.8
Eucgr.F03793 Eucalyptus grandis HOM05D006879 ORTHO05D008452 3.1e-39 165.2 127 63.0
Manes.02G164300 Manihot esculenta HOM05D006879 ORTHO05D008452 5.4e-39 164.5 123 58.5
CiPaw.06G031600 Carya illinoinensis HOM05D006879 ORTHO05D008452 7.0e-39 164.1 124 60.5
Duzib041G0788 Durio zibethinus HOM05D006879 ORTHO05D008452 7.0e-39 164.1 123 61.0
RcHm_v2.0_Chr6g0295961 Rosa chinensis HOM05D006879 ORTHO05D008452 9.1e-39 163.7 125 62.4
FAN15G3590 Fragaria x ananassa HOM05D006879 ORTHO05D008452 5.9e-38 161.0 148 54.1
Sc02g0005010 Simmondsia chinensis HOM05D006879 ORTHO05D008452 5.9e-38 161.0 124 61.3
Ciclev10002899m.g Citrus clementina HOM05D006879 ORTHO05D008452 7.7e-38 160.6 113 61.1
Aqoxy6G00233 Aquilegia oxysepala HOM05D006879 ORTHO05D008452 1.0e-37 160.2 125 60.0
PGR083G2398 Punica granatum HOM05D006879 ORTHO05D008452 1.7e-37 159.5 117 61.5
Lsat_1_v5_gn_6_93360 Lactuca sativa HOM05D006879 ORTHO05D008452 2.9e-37 158.7 115 66.1
Aa31LG4G7630 Aethionema arabicum HOM05D006879 ORTHO05D008452 1.1e-36 156.8 114 60.5
HanXRQChr03g0088981 Helianthus annuus HOM05D006879 ORTHO05D008452 1.1e-36 156.8 117 63.2
Potri.005G178501 Populus trichocarpa HOM05D006879 ORTHO05D008452 1.1e-36 156.8 125 57.6
AUR62014329 Chenopodium quinoa HOM05D006879 ORTHO05D008452 1.5e-36 156.4 119 65.5
Phvul.008G160300 Phaseolus vulgaris HOM05D006879 ORTHO05D008452 3.3e-36 155.2 117 62.4
Prupe.1G494800 Prunus persica HOM05D006879 ORTHO05D008452 3.3e-36 155.2 105 65.7
BcaB02g07111 Brassica carinata HOM05D006879 ORTHO05D008452 4.2e-36 154.8 125 58.4
VMungo0647G0471 Vigna mungo HOM05D006879 ORTHO05D008452 4.2e-36 154.8 125 58.4
Hund17297 Selenicereus undatus HOM05D006879 ORTHO05D008452 5.5e-36 154.5 118 62.7
BraA07t30441Z Brassica rapa HOM05D006879 ORTHO05D008452 9.5e-36 153.7 125 57.6
C06p31190 Brassica napus HOM05D006879 ORTHO05D008452 1.2e-35 153.3 125 58.4
Lj1g0005641 Lotus japonicus HOM05D006879 ORTHO05D008452 1.2e-35 153.3 125 59.2
PSO528G0112 Papaver somniferum HOM05D006879 ORTHO05D008452 1.2e-35 153.3 117 60.7
Solyc08g067800.3 Solanum lycopersicum HOM05D006879 ORTHO05D008452 1.2e-35 153.3 114 59.6
BcaC08g45472 Brassica carinata HOM05D006879 ORTHO05D008452 1.6e-35 152.9 125 57.6
BolC6t38260H Brassica oleracea HOM05D006879 ORTHO05D008452 1.6e-35 152.9 125 57.6
Sopen08g021740 Solanum pennellii HOM05D006879 ORTHO05D008452 1.6e-35 152.9 114 59.6
Atru.chr13.1490 Acer truncatum HOM05D006879 ORTHO05D008452 2.1e-35 152.5 115 60.9
Glyma.14G151700 Glycine max HOM05D006879 ORTHO05D008452 2.1e-35 152.5 115 62.6
Hma1.2p1_0054F.1_g031040 Hydrangea macrophylla HOM05D006879 ORTHO05D008452 2.1e-35 152.5 123 56.9
A07p27940 Brassica napus HOM05D006879 ORTHO05D008452 2.8e-35 152.1 125 56.8
Cc10_g12010 Coffea canephora HOM05D006879 ORTHO05D008452 4.7e-35 151.4 120 59.2
AL2G37750 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 6.1e-35 151.0 123 56.1
AUR62019072 Chenopodium quinoa HOM05D006879 ORTHO05D008452 6.1e-35 151.0 118 63.6
Medtr3g088570 Medicago truncatula HOM05D006879 ORTHO05D008452 8.0e-35 150.6 115 59.1
TAR628G0734 Trochodendron aralioides HOM05D006879 ORTHO05D008452 8.0e-35 150.6 108 63.0
AT1G77540 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 1.0e-34 150.2 123 55.3
CAN.G21.5 Capsicum annuum HOM05D006879 ORTHO05D008452 2.3e-34 149.1 123 56.9
Thhalv10019334m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 2.3e-34 149.1 107 61.7
Actinidia03466 Actinidia chinensis HOM05D006879 ORTHO05D008452 3.0e-34 148.7 125 56.8
Carub.0002s2444 Capsella rubella HOM05D006879 ORTHO05D008452 4.0e-34 148.3 113 61.1
arahy.Tifrunner.gnm1.ann1.0SZ2NS Arachis hypogaea HOM05D006879 ORTHO05D008452 5.2e-34 147.9 110 60.9
arahy.Tifrunner.gnm1.ann1.61DA9N Arachis hypogaea HOM05D006879 ORTHO05D008452 5.2e-34 147.9 110 60.9
arahy.Tifrunner.gnm1.ann1.GV74HV Arachis hypogaea HOM05D006879 ORTHO05D008452 5.2e-34 147.9 110 60.9
Lalb_Chr11g0066061 Lupinus albus HOM05D006879 ORTHO05D008452 5.2e-34 147.9 130 55.4
THA.LOC104813659 Tarenaya hassleriana HOM05D006879 ORTHO05D008452 5.2e-34 147.9 118 58.5
Sp5g32720 Schrenkiella parvula HOM05D006879 ORTHO05D008452 6.8e-34 147.5 127 54.3
TWI32G0821 Tripterygium wilfordii HOM05D006879 ORTHO05D008452 6.8e-34 147.5 106 63.2
PSO170G0506 Papaver somniferum HOM05D006879 ORTHO05D008452 1.2e-33 146.7 117 60.7
CDE07G0981 Ceratophyllum demersum HOM05D006879 ORTHO05D008452 1.5e-33 146.4 115 57.4
AT1G21770 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 2.6e-33 145.6 117 56.4
ECA240G3722 Erigeron canadensis HOM05D006879 ORTHO05D008452 3.4e-33 145.2 117 63.2
EL10Ac1g01022 Beta vulgaris HOM05D006879 ORTHO05D008452 4.4e-33 144.8 117 60.7
Carub.0001s2123 Capsella rubella HOM05D006879 ORTHO05D008452 4.4e-33 144.8 115 55.7
Ca_28182_v3 Cicer arietinum L. HOM05D006879 ORTHO05D008452 4.4e-33 144.8 109 61.5
Nitab4.5_0004334g0040 Nicotiana tabacum HOM05D006879 ORTHO05D008452 4.4e-33 144.8 113 61.9
Nitab4.5_0005583g0080 Nicotiana tabacum HOM05D006879 ORTHO05D008452 4.4e-33 144.8 115 60.9
Psat5g086200 Pisum sativum HOM05D006879 ORTHO05D008452 4.4e-33 144.8 115 59.1
CANSAT56G2034 Cannabis sativa HOM05D006879 ORTHO05D008452 5.7e-33 144.4 124 57.3
Migut.C01128 Erythranthe guttata HOM05D006879 ORTHO05D008452 1.3e-32 143.3 113 62.8
MD15G1347100 Malus domestica HOM05D006879 ORTHO05D008452 1.7e-32 142.9 105 61.9
CARHR071070 Cardamine hirsuta HOM05D006879 ORTHO05D008452 2.2e-32 142.5 113 57.5
AL1G34970 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 4.9e-32 141.4 112 55.4
BcaC05g26099 Brassica carinata HOM05D006879 ORTHO05D008452 6.3e-32 141.0 107 56.1
Aa31LG7G5750 Aethionema arabicum HOM05D006879 ORTHO05D008452 8.3e-32 140.6 108 55.6
Sp1g19330 Schrenkiella parvula HOM05D006879 ORTHO05D008452 1.4e-31 139.8 110 55.5
MSTRG.25382 Avicennia marina HOM05D006879 ORTHO05D008452 1.8e-31 139.4 112 60.7
ATR0584G146 Amborella trichopoda HOM05D006879 ORTHO05D008452 2.4e-31 139.0 102 59.8
Thhalv10009164m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 2.4e-31 139.0 110 54.5
BolC5t30777H Brassica oleracea HOM05D006879 ORTHO05D008452 3.1e-31 138.7 107 55.1
BcaB07g32176 Brassica carinata HOM05D006879 ORTHO05D008452 2.0e-30 136.0 107 54.2
Cpa.g.sc418.6 Carica papaya HOM05D006879 ORTHO05D008452 1.0e-29 133.7 94 63.8
A06p17880 Brassica napus HOM05D006879 ORTHO05D008452 1.3e-29 133.3 107 54.2
BraA06t24878Z Brassica rapa HOM05D006879 ORTHO05D008452 1.3e-29 133.3 107 54.2
C05p20780 Brassica napus HOM05D006879 ORTHO05D008452 2.3e-29 132.5 107 54.2
RhsimUnG0092300 Rhododendron simsii HOM05D000586 ORTHO05D008452 6.6e-29 131.0 82 67.1
TPR.G20905 Trifolium pratense HOM05D006879 ORTHO05D008452 1.1e-28 130.2 79 72.2
vmacro00838 Vaccinium macrocarpon HOM05D006879 ORTHO05D008452 1.1e-28 130.2 85 65.9
SGA_v2.0_scaffold52G18964 Striga asiatica HOM05D006879 ORTHO05D008452 1.4e-26 123.2 115 54.8
Ah.05g171050 Amaranthus hybridus HOM05D006879 ORTHO05D008452 4.0e-26 121.7 81 70.4
GSVIVG01008857001 Vitis vinifera HOM05D006879 ORTHO05D008452 2.2e-24 115.9 80 70.0
CAN.G21.4 Capsicum annuum HOM05D006879 ORTHO05D008452 8.3e-24 114.0 115 44.3
HanXRQChr04g0101301 Helianthus annuus HOM05D006879 ORTHO05D008452 2.0e-22 109.4 66 74.2
Peaxi162Scf00332g00015 Petunia axillaris HOM05D006879 ORTHO05D008452 2.0e-22 109.4 79 63.3
HanXRQChr01g0005251 Helianthus annuus HOM05D006879 ORTHO05D008452 2.7e-22 109.0 64 73.4
Oeu059437.1 Olea europaea HOM05D006879 ORTHO05D008452 4.6e-22 108.2 80 62.5
SEGI_19819 Sequoiadendron giganteum HOM05D006879 ORTHO05D008452 3.3e-20 102.1 85 57.6
Pp3c12_9490 Physcomitrium patens HOM05D006879 ORTHO05D008452 1.6e-19 99.8 113 45.1
Zm00001eb082730 Zea mays HOM05D006879 ORTHO05D008452 4.0e-18 95.1 120 41.7
SMO146G0286 Selaginella moellendorffii HOM05D006879 ORTHO05D008452 3.4e-17 92.0 107 43.9
Mapoly0075s0062 Marchantia polymorpha HOM05D006879 ORTHO05D008452 7.5e-17 90.9 125 44.0
Eucgr.H03927 Eucalyptus grandis HOM05D006879 ORTHO05D008452 6.4e-16 87.8 92 52.2
Eucgr.H03925 Eucalyptus grandis HOM05D006879 ORTHO05D008452 7.0e-15 84.3 64 60.9
AagrBONN_evm.TU.Sc2ySwM_117.2168 Anthoceros agrestis HOM05D006879 ORTHO05D008452 3.0e-13 79.0 103 40.8
Os04g0431300 Oryza sativa ssp. japonica HOM05D006879 ORTHO05D008452 5.1e-13 78.2 74 50.0
HanXRQChr09g0244451 Helianthus annuus HOM05D006879 ORTHO05D008452 2.5e-12 75.9 49 73.5
CBR_g36233 Chara braunii HOM05D006879 ORTHO05D008452 2.2e-08 62.8 74 40.5


User provided reference genes

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