Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG11G015710 Citrullus lanatus HOM05D007246 ORTHO05D009066 5.4e-57 224.2 119 100.0
Sed0023701 Sechium edule HOM05D007246 ORTHO05D009066 5.6e-46 187.6 119 80.7
CsaV3_4G028300 Cucumis sativus L. HOM05D007246 ORTHO05D009066 2.1e-45 185.7 119 82.4
MELO3C010475.2 Cucumis melo HOM05D007246 ORTHO05D009066 2.6e-43 178.7 119 79.8
Manes.18G076600 Manihot esculenta HOM05D007246 ORTHO05D009066 2.5e-33 145.6 119 63.9
CiPaw.05G222500 Carya illinoinensis HOM05D007246 ORTHO05D009066 3.2e-33 145.2 120 64.2
CANSAT25G3837 Cannabis sativa HOM05D007246 ORTHO05D009066 5.1e-31 137.9 119 56.3
Potri.002G084400 Populus trichocarpa HOM05D007246 ORTHO05D009066 1.5e-30 136.3 119 59.7
QL09p034990 Quercus lobata HOM05D007246 ORTHO05D009066 3.3e-30 135.2 121 62.0
Lj5g0017876 Lotus japonicus HOM05D007246 ORTHO05D009066 4.3e-30 134.8 121 61.2
Ciclev10002868m.g Citrus clementina HOM05D007246 ORTHO05D009066 1.6e-29 132.9 121 53.7
Glyma.20G199500 Glycine max HOM05D007246 ORTHO05D009066 2.1e-29 132.5 119 56.3
RcHm_v2.0_Chr6g0295671 Rosa chinensis HOM05D007246 ORTHO05D009066 2.1e-29 132.5 119 59.7
TPR.G18552 Trifolium pratense HOM05D007246 ORTHO05D009066 2.1e-29 132.5 121 60.3
TWI36G0927 Tripterygium wilfordii HOM05D007246 ORTHO05D009066 1.4e-28 129.8 119 58.8
Eucgr.F03786 Eucalyptus grandis HOM05D007246 ORTHO05D009066 1.8e-28 129.4 119 58.0
Prupe.1G499600 Prunus persica HOM05D007246 ORTHO05D009066 4.1e-28 128.3 121 57.0
Thecc.08G124300 Theobroma cacao HOM05D007246 ORTHO05D009066 4.1e-28 128.3 119 57.1
MD08G1164500 Malus domestica HOM05D007246 ORTHO05D009066 5.3e-28 127.9 120 57.5
Phvul.L001676 Phaseolus vulgaris HOM05D007246 ORTHO05D009066 6.9e-28 127.5 118 55.9
Duzib093G0837 Durio zibethinus HOM05D007246 ORTHO05D009066 9.0e-28 127.1 120 55.8
Lalb_Chr06g0169561 Lupinus albus HOM05D007246 ORTHO05D009066 9.0e-28 127.1 114 57.9
Nn5g28257 Nelumbo nucifera HOM05D007246 ORTHO05D009066 2.6e-27 125.6 111 55.9
Atru.chr10.1388 Acer truncatum HOM05D007246 ORTHO05D009066 3.4e-27 125.2 119 55.5
Rhsim03G0059000 Rhododendron simsii HOM05D007246 ORTHO05D009066 5.8e-27 124.4 120 54.2
Haze_00452 Corylus avellana HOM05D007246 ORTHO05D009066 7.6e-27 124.0 120 59.2
Gorai.010G050000 Gossypium raimondii HOM05D007246 ORTHO05D009066 7.6e-27 124.0 100 63.0
Actinidia02617 Actinidia chinensis HOM05D007246 ORTHO05D009066 1.0e-26 123.6 120 58.3
FAN15G0425 Fragaria x ananassa HOM05D007246 ORTHO05D009066 1.0e-26 123.6 100 64.0
Gohir.A06G044000 Gossypium hirsutum HOM05D007246 ORTHO05D009066 1.7e-26 122.9 100 62.0
arahy.Tifrunner.gnm1.ann1.B2XLC5 Arachis hypogaea HOM05D007246 ORTHO05D009066 2.9e-26 122.1 111 56.8
arahy.Tifrunner.gnm1.ann1.HQB0BQ Arachis hypogaea HOM05D007246 ORTHO05D009066 2.9e-26 122.1 111 56.8
GSVIVG01008877001 Vitis vinifera HOM05D007246 ORTHO05D009066 2.9e-26 122.1 119 57.1
FAN27G1944 Fragaria x ananassa HOM05D007246 ORTHO05D009066 5.0e-26 121.3 88 68.2
Cfa016011 Carpinus fangiana HOM05D007246 ORTHO05D009066 6.5e-26 120.9 123 56.1
FvH4_2g26810 Fragaria vesca HOM05D007246 ORTHO05D009066 6.5e-26 120.9 100 62.0
Psat6g131200 Pisum sativum HOM05D007246 ORTHO05D009066 6.5e-26 120.9 121 56.2
Aqoxy6G00205 Aquilegia oxysepala HOM05D007246 ORTHO05D009066 8.4e-26 120.6 116 54.3
VMungo0720G2760 Vigna mungo HOM05D003112 ORTHO05D003660 1.4e-25 119.8 98 61.2
Gohir.D06G044900 Gossypium hirsutum HOM05D007246 ORTHO05D009066 1.9e-25 119.4 101 62.4
Hma1.2p1_0186F.1_g081760 Hydrangea macrophylla HOM05D007246 ORTHO05D009066 3.2e-25 118.6 120 55.0
CSS0048322 Camellia sinensis var. sinensis HOM05D007246 ORTHO05D009066 5.5e-25 117.9 121 52.9
Medtr1g073190 Medicago truncatula HOM05D007246 ORTHO05D009066 9.3e-25 117.1 121 55.4
PGR142G2996 Punica granatum HOM05D007246 ORTHO05D009066 9.3e-25 117.1 120 55.8
Ca_09797_v3 Cicer arietinum L. HOM05D007246 ORTHO05D009066 2.1e-24 115.9 121 52.9
Peaxi162Scf00537g00034 Petunia axillaris HOM05D007246 ORTHO05D009066 3.5e-24 115.2 119 50.4
Nitab4.5_0001803g0080 Nicotiana tabacum HOM05D007246 ORTHO05D009066 7.9e-24 114.0 119 51.3
TAR381G0547 Trochodendron aralioides HOM05D007246 ORTHO05D009066 3.0e-23 112.1 104 56.7
EL10Ac1g01002 Beta vulgaris HOM05D007246 ORTHO05D009066 3.9e-23 111.7 113 53.1
COL.COLO4_35932 Corchorus olitorius HOM05D007246 ORTHO05D009066 6.7e-23 110.9 116 53.4
Oeu040422.1 Olea europaea HOM05D007246 ORTHO05D009066 6.7e-23 110.9 117 53.8
PGSC0003DMG400000898 Solanum tuberosum HOM05D007246 ORTHO05D009066 1.1e-22 110.2 102 53.9
Nitab4.5_0001273g0060 Nicotiana tabacum HOM05D007246 ORTHO05D009066 2.5e-22 109.0 106 50.0
Aa31LG10G5550 Aethionema arabicum HOM05D007246 ORTHO05D009066 4.3e-22 108.2 118 50.8
Carub.0001s3729 Capsella rubella HOM05D007246 ORTHO05D009066 4.3e-22 108.2 118 50.0
PSO170G1503 Papaver somniferum HOM05D007246 ORTHO05D009066 5.7e-22 107.8 113 52.2
AT1G48200 Arabidopsis thaliana HOM05D007246 ORTHO05D009066 7.4e-22 107.5 118 49.2
PSO528G0221 Papaver somniferum HOM05D007246 ORTHO05D009066 9.7e-22 107.1 113 52.2
Sopen11g007630 Solanum pennellii HOM05D007246 ORTHO05D009066 1.6e-21 106.3 102 52.0
Solyc11g012890.2 Solanum lycopersicum HOM05D007246 ORTHO05D009066 2.2e-21 105.9 102 52.0
Thhalv10011824m.g Eutrema salsugineum HOM05D007246 ORTHO05D009066 3.7e-21 105.1 118 50.8
Sp1g35150 Schrenkiella parvula HOM05D007246 ORTHO05D009066 3.7e-21 105.1 118 50.0
Sc25g0000500 Simmondsia chinensis HOM05D007246 ORTHO05D009066 1.8e-20 102.8 103 54.4
Cpa.g.sc36.60 Carica papaya HOM05D007246 ORTHO05D009066 4.1e-20 101.7 102 54.9
AL1G54790 Arabidopsis lyrata HOM05D007246 ORTHO05D009066 6.9e-20 100.9 111 50.5
A06p47840 Brassica napus HOM05D007246 ORTHO05D009066 6.9e-20 100.9 118 48.3
BraA06t27654Z Brassica rapa HOM05D007246 ORTHO05D009066 6.9e-20 100.9 118 48.3
Ah.05g171160 Amaranthus hybridus HOM05D007246 ORTHO05D009066 9.0e-20 100.5 94 55.3
C06p02690 Brassica napus HOM05D007246 ORTHO05D009066 9.0e-20 100.5 116 49.1
BolC6t35395H Brassica oleracea HOM05D007246 ORTHO05D009066 9.0e-20 100.5 116 49.1
Lsat_1_v5_gn_5_179321 Lactuca sativa HOM05D007246 ORTHO05D009066 9.0e-20 100.5 99 48.5
HanXRQChr13g0407621 Helianthus annuus HOM05D007246 ORTHO05D009066 1.5e-19 99.8 120 42.5
BcaC06g31695 Brassica carinata HOM05D007246 ORTHO05D009066 2.0e-19 99.4 118 47.5
Hund17288 Selenicereus undatus HOM05D007246 ORTHO05D009066 2.0e-19 99.4 100 52.0
A06p04630 Brassica napus HOM05D007246 ORTHO05D009066 2.6e-19 99.0 120 46.7
BcaC08g43014 Brassica carinata HOM05D007246 ORTHO05D009066 5.9e-19 97.8 116 48.3
BcaC06g34651 Brassica carinata HOM05D007246 ORTHO05D009066 7.7e-19 97.4 118 47.5
C07p26120 Brassica napus HOM05D007246 ORTHO05D009066 7.7e-19 97.4 118 47.5
BolC7t43138H Brassica oleracea HOM05D007246 ORTHO05D009066 1.7e-18 96.3 118 47.5
Sp1g35170 Schrenkiella parvula HOM05D007246 ORTHO05D009066 1.7e-18 96.3 118 46.6
Migut.C01135 Erythranthe guttata HOM05D007246 ORTHO05D009066 3.8e-18 95.1 119 42.9
MSTRG.1448 Avicennia marina HOM05D007246 ORTHO05D009066 5.0e-18 94.7 112 50.0
BraA06t23667Z Brassica rapa HOM05D007246 ORTHO05D009066 1.4e-17 93.2 119 46.2
DCAR_003548 Daucus carota HOM05D007246 ORTHO05D009066 2.5e-17 92.4 102 47.1
SGA_v2.0_scaffold24G10465 Striga asiatica HOM05D007246 ORTHO05D009066 3.2e-17 92.0 89 51.7
THA.LOC104821809 Tarenaya hassleriana HOM05D007246 ORTHO05D009066 7.2e-17 90.9 110 47.3
CARHR037830 Cardamine hirsuta HOM05D007246 ORTHO05D009066 7.9e-16 87.4 76 56.6
ECA248G1302 Erigeron canadensis HOM05D007246 ORTHO05D009066 1.4e-15 86.7 120 40.0
CDE06G1719 Ceratophyllum demersum HOM05D007246 ORTHO05D009066 3.0e-15 85.5 114 40.4
MBI01_g01254_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 3.9e-15 85.1 96 49.0
Carub.0007s3396 Capsella rubella HOM05D007246 ORTHO05D009066 6.7e-15 84.3 116 42.2
MBI01_g01252_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 6.7e-15 84.3 96 47.9
MBI01_g01253_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 8.8e-15 84.0 79 51.9
MBI01_g01255_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 1.5e-14 83.2 96 47.9
unitig_37.g12972 Utricularia gibba HOM05D007246 ORTHO05D009066 1.3e-13 80.1 113 41.6
ATR0716G022 Amborella trichopoda HOM05D007246 ORTHO05D009066 2.2e-13 79.3 74 55.4
BcaB07g33783 Brassica carinata HOM05D007246 ORTHO05D009066 9.1e-12 73.9 107 43.9
SGA_v2.0_scaffold52G18970 Striga asiatica HOM05D007246 ORTHO05D009066 9.1e-12 73.9 100 41.0
FAN20G0163 Fragaria x ananassa HOM05D007246 ORTHO05D009066 5.9e-11 71.2 63 58.7
BcaB07g33731 Brassica carinata HOM05D007246 ORTHO05D009066 2.2e-10 69.3 75 48.0
BcaB07g33733 Brassica carinata HOM05D007246 ORTHO05D009066 2.2e-10 69.3 75 48.0
SGA_v2.0_scaffold52G18969 Striga asiatica HOM05D007246 ORTHO05D009066 8.5e-10 67.4 103 37.9
SalBow7G0738 Salvia bowleyana HOM05D007246 ORTHO05D009066 1.1e-09 67.0 95 37.9
HPP92_002815 Vanilla planifolia HOM05D007246 ORTHO05D009066 1.4e-09 66.6 66 50.0
Peaxi162Scf17552g00001 Petunia axillaris HOM05D007246 ORTHO05D009066 1.6e-08 63.2 63 52.4
Os06g0149500 Oryza sativa ssp. japonica HOM05D007246 ORTHO05D009066 2.1e-08 62.8 86 40.7
Lsat_1_v5_gn_4_16480 Lactuca sativa HOM05D007246 ORTHO05D009066 1.1e-06 57.0 38 60.5
SEGI_11751 Sequoiadendron giganteum HOM05D007246 ORTHO05D009066 5.7e-06 54.7 76 36.8


User provided reference genes

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