Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG11G015440 Citrullus lanatus HOM05D003923 ORTHO05D004553 1.0e-163 580.1 315 100.0
MELO3C010430.2 Cucumis melo HOM05D003923 ORTHO05D004553 1.0e-123 447.2 326 78.2
CsaV3_4G028650 Cucumis sativus L. HOM05D003923 ORTHO05D004553 2.0e-114 416.4 332 73.2
CiPaw.07G181200 Carya illinoinensis HOM05D003923 ORTHO05D004553 1.5e-74 283.9 350 51.4
Cfa013623 Carpinus fangiana HOM05D003923 ORTHO05D004553 5.8e-74 282.0 348 52.9
Gohir.D05G230200 Gossypium hirsutum HOM05D003923 ORTHO05D004553 1.3e-73 280.8 349 52.1
Gohir.A05G227800 Gossypium hirsutum HOM05D003923 ORTHO05D004553 3.8e-73 279.3 355 51.0
Gorai.009G238400 Gossypium raimondii HOM05D003923 ORTHO05D004553 3.8e-73 279.3 350 52.0
Lalb_Chr08g0241981 Lupinus albus HOM05D003923 ORTHO05D004553 6.4e-73 278.5 354 50.8
Sed0003612 Sechium edule HOM05D003923 ORTHO05D004553 2.1e-71 273.5 313 52.7
FAN13G1718 Fragaria x ananassa HOM05D003923 ORTHO05D004553 6.0e-71 271.9 359 49.6
FAN18G1313 Fragaria x ananassa HOM05D003923 ORTHO05D004553 7.8e-71 271.6 360 49.4
QL12p036407 Quercus lobata HOM05D003923 ORTHO05D004553 7.8e-71 271.6 365 47.4
FAN04G1592 Fragaria x ananassa HOM05D003923 ORTHO05D004553 1.0e-70 271.2 359 49.9
FvH4_5g37730 Fragaria vesca HOM05D003923 ORTHO05D004553 1.3e-70 270.8 360 49.4
FAN08G0462 Fragaria x ananassa HOM05D003923 ORTHO05D004553 3.0e-70 269.6 359 49.3
Haze_22250 Corylus avellana HOM05D003923 ORTHO05D004553 5.1e-70 268.9 352 49.1
Lalb_Chr11g0065491 Lupinus albus HOM05D003923 ORTHO05D004553 8.7e-70 268.1 362 46.7
CSS0021337 Camellia sinensis var. sinensis HOM05D003923 ORTHO05D004553 4.3e-69 265.8 338 51.5
Nn5g29082 Nelumbo nucifera HOM05D003923 ORTHO05D004553 4.3e-69 265.8 327 53.2
Duzib041G0577 Durio zibethinus HOM05D003923 ORTHO05D004553 6.2e-68 261.9 353 47.3
Lj1g0006284 Lotus japonicus HOM05D003923 ORTHO05D004553 8.1e-68 261.5 354 52.3
TWI56G0888 Tripterygium wilfordii HOM05D003923 ORTHO05D004553 1.1e-67 261.2 358 52.0
CSS0001866 Camellia sinensis var. sinensis HOM05D003923 ORTHO05D004553 1.4e-67 260.8 344 47.7
RcHm_v2.0_Chr7g0239471 Rosa chinensis HOM05D003923 ORTHO05D004553 1.4e-67 260.8 360 48.1
CiPaw.08G044000 Carya illinoinensis HOM05D003923 ORTHO05D004553 5.3e-67 258.8 353 47.6
Gohir.A06G036700 Gossypium hirsutum HOM05D003923 ORTHO05D004553 6.9e-67 258.5 350 49.1
Thecc.08G109100 Theobroma cacao HOM05D003923 ORTHO05D004553 1.5e-66 257.3 273 53.5
Phvul.009G029900 Phaseolus vulgaris HOM05D003923 ORTHO05D004553 2.0e-66 256.9 347 52.2
Medtr3g074210 Medicago truncatula HOM05D003923 ORTHO05D004553 3.4e-66 256.1 368 49.5
Prupe.1G514400 Prunus persica HOM05D003923 ORTHO05D004553 7.6e-66 255.0 374 46.5
Eucgr.F00301 Eucalyptus grandis HOM05D003923 ORTHO05D004553 1.7e-65 253.8 279 54.1
Hma1.2p1_0120F.1_g057290 Hydrangea macrophylla HOM05D003923 ORTHO05D004553 1.7e-65 253.8 267 55.1
Gohir.D06G037500 Gossypium hirsutum HOM05D003923 ORTHO05D004553 2.4e-64 250.0 350 50.0
MD15G1366500 Malus domestica HOM05D003923 ORTHO05D004553 3.2e-64 249.6 380 47.4
Cpa.g.sc36.119 Carica papaya HOM05D003923 ORTHO05D004553 3.5e-63 246.1 349 49.0
Gorai.010G042400 Gossypium raimondii HOM05D003923 ORTHO05D004553 3.5e-63 246.1 350 49.4
Rhsim06G0083500 Rhododendron simsii HOM05D003923 ORTHO05D004553 3.5e-63 246.1 353 43.3
Manes.18G068600 Manihot esculenta HOM05D003923 ORTHO05D004553 4.6e-63 245.7 368 47.3
TWI12G0076 Tripterygium wilfordii HOM05D003923 ORTHO05D004553 6.0e-63 245.4 353 48.4
MD08G1180900 Malus domestica HOM05D003923 ORTHO05D004553 2.3e-62 243.4 371 46.4
Sed0022190 Sechium edule HOM05D003923 ORTHO05D004553 3.0e-62 243.0 317 50.5
Duzib093G1759 Durio zibethinus HOM05D003923 ORTHO05D004553 5.1e-62 242.3 368 43.5
Potri.005G166400 Populus trichocarpa HOM05D003923 ORTHO05D004553 5.1e-62 242.3 272 52.2
Peaxi162Scf00041g01015 Petunia axillaris HOM05D003923 ORTHO05D004553 8.7e-62 241.5 358 47.2
Ciclev10001646m.g Citrus clementina HOM05D003923 ORTHO05D004553 1.1e-61 241.1 366 43.2
Oeu024542.1 Olea europaea HOM05D003923 ORTHO05D004553 1.3e-60 237.7 342 49.7
Cc10_g07380 Coffea canephora HOM05D003923 ORTHO05D004553 2.8e-60 236.5 367 46.6
Psat5g138360 Pisum sativum HOM05D003923 ORTHO05D004553 3.7e-60 236.1 363 46.3
TAR628G1119 Trochodendron aralioides HOM05D003923 ORTHO05D004553 4.8e-60 235.7 341 47.2
CANSAT25G0676 Cannabis sativa HOM05D003923 ORTHO05D004553 1.8e-59 233.8 353 49.9
Sabra05G0125400 Salix brachista HOM05D003923 ORTHO05D004553 4.0e-59 232.6 275 50.5
Potri.002G094700 Populus trichocarpa HOM05D003923 ORTHO05D004553 9.0e-59 231.5 357 44.5
Oeu061492.1 Olea europaea HOM05D003923 ORTHO05D004553 1.2e-58 231.1 280 51.8
TPR.G35206 Trifolium pratense HOM05D003923 ORTHO05D004553 4.5e-58 229.2 363 47.1
MSTRG.24466 Avicennia marina HOM05D003923 ORTHO05D004553 5.8e-58 228.8 347 47.0
Ca_15243_v3 Cicer arietinum L. HOM05D003923 ORTHO05D004553 5.8e-58 228.8 365 46.8
EL10Ac1g01249 Beta vulgaris HOM05D003923 ORTHO05D004553 1.3e-57 227.6 333 46.5
COL.COLO4_16427 Corchorus olitorius HOM05D003923 ORTHO05D004553 3.8e-57 226.1 345 45.2
Aqoxy5G01999 Aquilegia oxysepala HOM05D003923 ORTHO05D004553 2.4e-56 223.4 330 46.1
Eucgr.F02437 Eucalyptus grandis HOM05D003923 ORTHO05D004553 3.2e-56 223.0 308 45.5
Glyma.04G103500 Glycine max HOM05D003923 ORTHO05D004553 5.5e-56 222.2 319 48.0
Glyma.06G104700 Glycine max HOM05D003923 ORTHO05D004553 5.5e-56 222.2 359 45.7
vmacro21241 Vaccinium macrocarpon HOM05D003923 ORTHO05D004553 3.5e-55 219.5 338 47.0
HanXRQChr15g0491381 Helianthus annuus HOM05D003923 ORTHO05D004553 3.9e-54 216.1 353 46.5
THA.LOC104809709 Tarenaya hassleriana HOM05D003923 ORTHO05D004553 6.7e-54 215.3 360 44.2
CAN.G1261.5 Capsicum annuum HOM05D003923 ORTHO05D004553 1.1e-53 214.5 336 46.7
Lsat_1_v5_gn_9_43840 Lactuca sativa HOM05D003923 ORTHO05D004553 4.3e-53 212.6 340 47.4
Sabra02G0074700 Salix brachista HOM05D003923 ORTHO05D004553 4.3e-53 212.6 226 53.5
PGR042G1650 Punica granatum HOM05D003923 ORTHO05D004553 7.4e-53 211.8 349 41.5
Sc23g0000110 Simmondsia chinensis HOM05D003923 ORTHO05D004553 4.8e-52 209.1 266 54.9
Aa31LG4G8160 Aethionema arabicum HOM05D003923 ORTHO05D004553 1.1e-51 208.0 337 44.5
BcaB03g15981 Brassica carinata HOM05D003923 ORTHO05D004553 1.4e-51 207.6 336 47.3
BcaC08g47387 Brassica carinata HOM05D003923 ORTHO05D004553 1.4e-51 207.6 336 44.6
C06p52080 Brassica napus HOM05D003923 ORTHO05D004553 1.4e-51 207.6 336 44.6
BolC6t40231H Brassica oleracea HOM05D003923 ORTHO05D004553 1.4e-51 207.6 336 44.6
ECA232G2894 Erigeron canadensis HOM05D003923 ORTHO05D004553 1.8e-51 207.2 354 41.2
Manes.02G153800 Manihot esculenta HOM05D003923 ORTHO05D004553 5.3e-51 205.7 260 45.4
PSO210G6507 Papaver somniferum HOM05D003923 ORTHO05D004553 5.8e-50 202.2 362 42.5
PSO447G0218 Papaver somniferum HOM05D003923 ORTHO05D004553 2.2e-49 200.3 362 42.3
MBI02_g08739_MAGBIO Magnolia biondii HOM05D003923 ORTHO05D004553 3.8e-49 199.5 333 44.1
Actinidia30763 Actinidia chinensis HOM05D003923 ORTHO05D004553 5.5e-48 195.7 329 39.2
ECA246G1087 Erigeron canadensis HOM05D003923 ORTHO05D004553 5.5e-48 195.7 342 37.7
BcaB05g25102 Brassica carinata HOM05D003923 ORTHO05D004553 1.2e-47 194.5 328 42.1
VMungo1309G2192 Vigna mungo HOM05D003923 ORTHO05D004553 2.1e-47 193.7 205 60.0
Duzib116G0286 Durio zibethinus HOM05D003923 ORTHO05D004553 3.5e-47 193.0 290 44.8
Nitab4.5_0000421g0080 Nicotiana tabacum HOM05D003923 ORTHO05D004553 4.6e-47 192.6 271 47.2
PGSC0003DMG400009479 Solanum tuberosum HOM05D003923 ORTHO05D004553 7.9e-47 191.8 226 51.8
ClCG08G011040 Citrullus lanatus HOM05D003923 ORTHO05D004553 1.1e-45 188.0 245 53.5
Peaxi162Scf00160g00147 Petunia axillaris HOM05D003923 ORTHO05D004553 1.5e-45 187.6 324 45.4
MSTRG.22149 Avicennia marina HOM05D003923 ORTHO05D004553 2.5e-45 186.8 223 53.8
CARHR071570 Cardamine hirsuta HOM05D003923 ORTHO05D004553 3.3e-45 186.4 345 45.2
Carub.0002s2500 Capsella rubella HOM05D003923 ORTHO05D004553 5.7e-45 185.7 347 46.4
Nitab4.5_0001992g0040 Nicotiana tabacum HOM05D003923 ORTHO05D004553 5.7e-45 185.7 219 53.0
Sopen04g029130 Solanum pennellii HOM05D003923 ORTHO05D004553 7.4e-45 185.3 170 56.5
Nitab4.5_0000675g0060 Nicotiana tabacum HOM05D003923 ORTHO05D004553 9.7e-45 184.9 346 40.8
Sed0005628 Sechium edule HOM05D003923 ORTHO05D004553 2.2e-44 183.7 330 40.0
BraA07t31856Z Brassica rapa HOM05D003923 ORTHO05D004553 8.2e-44 181.8 329 46.5
Sp5g33250 Schrenkiella parvula HOM05D003923 ORTHO05D004553 1.1e-43 181.4 346 46.0
Migut.N02906 Erythranthe guttata HOM05D003923 ORTHO05D004553 3.1e-43 179.9 349 42.7
A07p43360 Brassica napus HOM05D003923 ORTHO05D004553 5.3e-43 179.1 333 45.6
Lalb_Chr17g0344141 Lupinus albus HOM05D003923 ORTHO05D004553 5.3e-43 179.1 323 39.6
Thhalv10018798m.g Eutrema salsugineum HOM05D003923 ORTHO05D004553 1.2e-42 177.9 343 44.3
MELO3C011359.2 Cucumis melo HOM05D003923 ORTHO05D004553 1.5e-42 177.6 335 44.8
Migut.O00455 Erythranthe guttata HOM05D003923 ORTHO05D004553 1.5e-42 177.6 231 53.7
Solyc12g056990.1 Solanum lycopersicum HOM05D003923 ORTHO05D004553 3.4e-42 176.4 330 42.1
PGSC0003DMG400008539 Solanum tuberosum HOM05D003923 ORTHO05D004553 3.4e-42 176.4 331 40.5
AL2G38420 Arabidopsis lyrata HOM05D003923 ORTHO05D004553 1.0e-41 174.9 347 43.8
CsaV3_2G024220 Cucumis sativus L. HOM05D003923 ORTHO05D004553 2.9e-41 173.3 340 41.2
BcaB02g07147 Brassica carinata HOM05D003923 ORTHO05D004553 6.5e-41 172.2 340 43.2
Atru.chr13.1213 Acer truncatum HOM05D003923 ORTHO05D004553 8.5e-41 171.8 149 68.5
Ah.05g170190 Amaranthus hybridus HOM05D003923 ORTHO05D004553 1.1e-40 171.4 334 38.0
BraA02t07205Z Brassica rapa HOM05D003923 ORTHO05D004553 1.4e-40 171.0 334 44.9
CARHR022580 Cardamine hirsuta HOM05D003923 ORTHO05D004553 1.4e-40 171.0 333 40.8
A02p22020 Brassica napus HOM05D003923 ORTHO05D004553 1.9e-40 170.6 335 44.8
AT1G78110 Arabidopsis thaliana HOM05D003923 ORTHO05D004553 7.2e-40 168.7 342 43.0
Nitab4.5_0002243g0010 Nicotiana tabacum HOM05D003923 ORTHO05D004553 9.4e-40 168.3 307 42.0
Sp1g19740 Schrenkiella parvula HOM05D003923 ORTHO05D004553 9.4e-40 168.3 341 40.5
A09p42540 Brassica napus HOM05D003923 ORTHO05D004553 1.2e-39 167.9 330 42.7
Lalb_Chr04g0253191 Lupinus albus HOM05D003923 ORTHO05D004553 2.7e-39 166.8 326 37.4
BraA09t39730Z Brassica rapa HOM05D003923 ORTHO05D004553 6.1e-39 165.6 330 42.4
BcaC03g15795 Brassica carinata HOM05D003923 ORTHO05D004553 1.4e-38 164.5 331 44.7
C02p35410 Brassica napus HOM05D003923 ORTHO05D004553 1.4e-38 164.5 331 43.8
BolC2t09553H Brassica oleracea HOM05D003923 ORTHO05D004553 3.0e-38 163.3 331 44.4
Carub.0001s2178 Capsella rubella HOM05D003923 ORTHO05D004553 3.9e-38 162.9 344 41.9
BraA07t30411Z Brassica rapa HOM05D003923 ORTHO05D004553 6.7e-38 162.2 369 39.8
AUR62027732 Chenopodium quinoa HOM05D003923 ORTHO05D004553 1.5e-37 161.0 211 46.0
Solyc04g072940.4 Solanum lycopersicum HOM05D003923 ORTHO05D004553 5.7e-37 159.1 192 51.0
AL1G35680 Arabidopsis lyrata HOM05D003923 ORTHO05D004553 1.7e-36 157.5 339 39.2
AT1G22230 Arabidopsis thaliana HOM05D003923 ORTHO05D004553 2.8e-36 156.8 334 40.1
unitig_21.g20601 Utricularia gibba HOM05D003923 ORTHO05D004553 3.1e-35 153.3 337 34.4
HanXRQChr05g0162921 Helianthus annuus HOM05D003923 ORTHO05D004553 2.0e-34 150.6 226 48.7
A07p27700 Brassica napus HOM05D003923 ORTHO05D004553 3.4e-34 149.8 374 39.3
BcaB07g32243 Brassica carinata HOM05D003923 ORTHO05D004553 4.5e-34 149.4 329 40.7
BcaC05g26150 Brassica carinata HOM05D003923 ORTHO05D004553 4.5e-34 149.4 329 40.7
C05p21350 Brassica napus HOM05D003923 ORTHO05D004553 4.5e-34 149.4 329 40.7
BolC5t30833H Brassica oleracea HOM05D003923 ORTHO05D004553 5.9e-34 149.1 332 40.1
ATR0564G364 Amborella trichopoda HOM05D003923 ORTHO05D004553 1.3e-33 147.9 339 35.7
BcaB07g32245 Brassica carinata HOM05D003923 ORTHO05D004553 2.2e-33 147.1 333 41.7
BraA07t29207Z Brassica rapa HOM05D003923 ORTHO05D004553 2.2e-33 147.1 318 37.4
PSO541G2428 Papaver somniferum HOM05D003923 ORTHO05D004553 2.2e-33 147.1 390 34.9
BcaC08g45438 Brassica carinata HOM05D003923 ORTHO05D004553 6.5e-33 145.6 372 40.1
C06p30680 Brassica napus HOM05D003923 ORTHO05D004553 6.5e-33 145.6 372 40.1
BolC6t38232H Brassica oleracea HOM05D003923 ORTHO05D004553 6.5e-33 145.6 372 40.1
Sopen00g003260 Solanum pennellii HOM05D003923 ORTHO05D004553 6.5e-33 145.6 269 45.0
PSO781G0128 Papaver somniferum HOM05D003923 ORTHO05D004553 3.2e-32 143.3 381 32.8
Thhalv10008264m.g Eutrema salsugineum HOM05D003923 ORTHO05D004553 5.5e-32 142.5 334 34.7
unitig_744.g24093 Utricularia gibba HOM05D003923 ORTHO05D004553 9.4e-32 141.7 263 42.2
Dinv13027 Davidia involucrata HOM05D003923 ORTHO05D004553 4.7e-31 139.4 232 40.9
A07p14630 Brassica napus HOM05D003923 ORTHO05D004553 1.8e-30 137.5 318 36.2
Aqoxy6G00599 Aquilegia oxysepala HOM05D003923 ORTHO05D004553 1.1e-29 134.8 323 33.4
SEGI_41423 Sequoiadendron giganteum HOM05D003923 ORTHO05D004553 1.7e-28 131.0 261 36.8
SalBow7G0529 Salvia bowleyana HOM05D003923 ORTHO05D004553 4.8e-28 129.4 294 33.7
Zm00001eb098670 Zea mays HOM05D003923 ORTHO05D004553 4.8e-28 129.4 382 34.3
BcaC06g34942 Brassica carinata HOM05D003923 ORTHO05D004553 1.5e-26 124.4 318 35.2
CDE12G0356 Ceratophyllum demersum HOM05D003923 ORTHO05D004553 3.4e-26 123.2 205 39.0
Zm00001eb311240 Zea mays HOM05D003923 ORTHO05D004553 1.9e-24 117.5 358 31.6
C07p21520 Brassica napus HOM05D003923 ORTHO05D004553 1.2e-23 114.8 318 34.0
ATR0122G028 Amborella trichopoda HOM05D003923 ORTHO05D004553 2.1e-23 114.0 314 32.5
Aa31LG7G6170 Aethionema arabicum HOM05D003923 ORTHO05D004553 2.7e-23 113.6 320 30.0
BolC7t42678H Brassica oleracea HOM05D003923 ORTHO05D004553 8.2e-20 102.1 153 43.8
Zm00001eb255200 Zea mays HOM05D003923 ORTHO05D004553 8.2e-20 102.1 343 30.3
Zm00001eb194180 Zea mays HOM05D003923 ORTHO05D004553 1.1e-19 101.7 337 33.2
Os09g0370000 Oryza sativa ssp. japonica HOM05D003923 ORTHO05D004553 7.7e-18 95.5 174 38.5
A07p43420 Brassica napus HOM05D003923 ORTHO05D004553 7.2e-16 89.0 92 55.4
HPP92_002331 Vanilla planifolia HOM05D003923 ORTHO05D004553 6.1e-15 85.9 323 31.9
GSVIVG01009013001 Vitis vinifera HOM05D003923 ORTHO05D004553 1.8e-11 74.3 82 52.4
Os02g0753400 Oryza sativa ssp. japonica HOM05D003923 ORTHO05D004553 3.1e-11 73.6 337 34.1
ATR0153G027 Amborella trichopoda HOM05D003923 ORTHO05D004553 7.7e-10 68.9 190 30.0
SEGI_08873 Sequoiadendron giganteum HOM05D004118 ORTHO05D004686 6.5e-09 65.9 235 26.4
unitig_578.g16204 Utricularia gibba HOM05D003923 ORTHO05D004553 2.1e-07 60.8 234 29.1
ATR0602G295 Amborella trichopoda HOM05D004118 ORTHO05D004686 6.1e-07 59.3 293 28.0
Lj8C153G19 Lonicera japonica HOM05D004118 ORTHO05D004686 6.1e-07 59.3 289 26.3
HanXRQChr03g0070941 Helianthus annuus HOM05D004118 ORTHO05D004686 8.0e-07 58.9 318 25.5
Haze_09381 Corylus avellana HOM05D004118 ORTHO05D004686 1.4e-06 58.2 311 23.8
CiPaw.12G116800 Carya illinoinensis HOM05D004118 ORTHO05D004686 1.8e-06 57.8 323 23.5
Cfa020624 Carpinus fangiana HOM05D004118 ORTHO05D004686 3.0e-06 57.0 314 23.9
Sp3g13300 Schrenkiella parvula HOM05D004118 ORTHO05D004686 4.0e-06 56.6 301 26.9
FAN05G3415 Fragaria x ananassa HOM05D004499 ORTHO05D004928 6.8e-06 55.8 236 27.5


User provided reference genes

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