Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG11G014680 Citrullus lanatus HOM05D005594 ORTHO05D006403 3.4e-118 428.3 213 100.0
ClCG02G008140 Citrullus lanatus HOM05D005594 ORTHO05D006403 8.2e-64 247.7 206 68.9
MELO3C003509.2 Cucumis melo HOM05D005594 ORTHO05D006403 3.8e-61 238.8 205 65.9
CsaV3_3G048080 Cucumis sativus L. HOM05D005594 ORTHO05D006403 7.2e-60 234.6 207 63.8
Sed0005434 Sechium edule HOM05D005594 ORTHO05D006403 2.6e-57 226.1 206 63.6
Sed0022235 Sechium edule HOM05D005594 ORTHO05D006403 1.2e-46 190.7 157 66.9
CSS0014517 Camellia sinensis var. sinensis HOM05D005594 ORTHO05D006403 1.8e-42 176.8 205 50.7
CSS0029582 Camellia sinensis var. sinensis HOM05D005594 ORTHO05D006403 3.0e-42 176.0 205 50.7
Eucgr.F02158 Eucalyptus grandis HOM05D005594 ORTHO05D006403 1.5e-41 173.7 205 48.3
Ciclev10001834m.g Citrus clementina HOM05D005594 ORTHO05D006403 2.6e-41 172.9 207 47.3
Thecc.08G073300 Theobroma cacao HOM05D005594 ORTHO05D006403 3.4e-41 172.6 203 47.3
Actinidia19620 Actinidia chinensis HOM05D005594 ORTHO05D006403 1.7e-40 170.2 205 47.3
GSVIVG01009200001 Vitis vinifera HOM05D005594 ORTHO05D006403 4.8e-40 168.7 215 48.4
TAR381G1609 Trochodendron aralioides HOM05D005594 ORTHO05D006403 1.8e-39 166.8 205 48.8
vmacro21357 Vaccinium macrocarpon HOM05D005594 ORTHO05D006403 2.4e-39 166.4 207 45.9
GSVIVG01026918001 Vitis vinifera HOM05D005594 ORTHO05D006403 4.1e-39 165.6 207 49.8
MBI16_g06011_MAGBIO Magnolia biondii HOM05D005594 ORTHO05D006403 1.2e-38 164.1 205 46.3
Oeu040880.1 Olea europaea HOM05D005594 ORTHO05D006403 3.5e-38 162.5 204 46.1
SalBow3G3026 Salvia bowleyana HOM05D005594 ORTHO05D006403 3.5e-38 162.5 203 45.8
Prupe.1G535400 Prunus persica HOM05D005594 ORTHO05D006403 4.5e-38 162.2 207 45.9
CiPaw.07G163500 Carya illinoinensis HOM05D005594 ORTHO05D006403 7.7e-38 161.4 210 44.3
Gohir.A05G218700 Gossypium hirsutum HOM05D005594 ORTHO05D006403 7.7e-38 161.4 204 45.1
PGR042G0833 Punica granatum HOM05D005594 ORTHO05D006403 7.7e-38 161.4 205 44.9
PGSC0003DMG400008701 Solanum tuberosum HOM05D005594 ORTHO05D006403 1.0e-37 161.0 208 44.7
Dinv42597 Davidia involucrata HOM05D005594 ORTHO05D006403 1.7e-37 160.2 205 46.8
TAR625G0360 Trochodendron aralioides HOM05D005594 ORTHO05D006403 1.7e-37 160.2 205 46.3
Duzib093G1195 Durio zibethinus HOM05D005594 ORTHO05D006403 2.2e-37 159.8 203 43.8
Gorai.009G228600 Gossypium raimondii HOM05D005594 ORTHO05D006403 2.2e-37 159.8 204 45.1
MD08G1202000 Malus domestica HOM05D005594 ORTHO05D006403 2.2e-37 159.8 206 45.1
Peaxi162Scf01112g00131 Petunia axillaris HOM05D005594 ORTHO05D006403 2.9e-37 159.5 203 45.8
Gohir.D05G221400 Gossypium hirsutum HOM05D005594 ORTHO05D006403 3.8e-37 159.1 204 45.1
Solyc04g076560.3 Solanum lycopersicum HOM05D005594 ORTHO05D006403 3.8e-37 159.1 208 45.2
Sopen04g030280 Solanum pennellii HOM05D005594 ORTHO05D006403 3.8e-37 159.1 208 45.2
Rhsim05G0205900 Rhododendron simsii HOM05D005594 ORTHO05D006403 5.0e-37 158.7 216 45.4
CiPaw.01G111900 Carya illinoinensis HOM05D005594 ORTHO05D006403 8.5e-37 157.9 201 45.3
Lj8A490G28 Lonicera japonica HOM05D005594 ORTHO05D006403 1.5e-36 157.1 205 43.9
Lj8A496G24 Lonicera japonica HOM05D005594 ORTHO05D006403 2.5e-36 156.4 205 43.9
CDE02G1340 Ceratophyllum demersum HOM05D005594 ORTHO05D006403 4.2e-36 155.6 208 44.7
CANSAT35G1072 Cannabis sativa HOM05D005594 ORTHO05D006403 9.4e-36 154.5 205 45.4
Nitab4.5_0000131g0040 Nicotiana tabacum HOM05D005594 ORTHO05D006403 1.2e-35 154.1 202 44.6
Sc15g0003090 Simmondsia chinensis HOM05D005594 ORTHO05D006403 1.2e-35 154.1 204 42.6
COL.COLO4_35271 Corchorus olitorius HOM05D005594 ORTHO05D006403 1.6e-35 153.7 203 42.9
Nn1g05624 Nelumbo nucifera HOM05D005594 ORTHO05D006403 1.6e-35 153.7 211 41.2
HanXRQChr09g0253981 Helianthus annuus HOM05D005594 ORTHO05D006403 2.1e-35 153.3 208 44.2
Nitab4.5_0009755g0010 Nicotiana tabacum HOM05D005594 ORTHO05D006403 3.6e-35 152.5 202 44.1
Rhsim06G0070100 Rhododendron simsii HOM05D005594 ORTHO05D006403 8.0e-35 151.4 207 45.4
Atru.chr13.987 Acer truncatum HOM05D005594 ORTHO05D006403 1.8e-34 150.2 207 43.5
Haze_22483 Corylus avellana HOM05D005594 ORTHO05D006403 1.8e-34 150.2 225 41.8
Hund26823 Selenicereus undatus HOM05D005594 ORTHO05D006403 1.8e-34 150.2 204 41.7
Migut.N00274 Erythranthe guttata HOM05D005594 ORTHO05D006403 2.3e-34 149.8 210 41.9
QL09p018366 Quercus lobata HOM05D005594 ORTHO05D006403 3.0e-34 149.4 212 42.0
PGSC0003DMG400009352 Solanum tuberosum HOM05D005594 ORTHO05D006403 3.0e-34 149.4 162 50.0
QL12p040902 Quercus lobata HOM05D005594 ORTHO05D006403 6.8e-34 148.3 212 42.0
HPP92_001778 Vanilla planifolia HOM05D005594 ORTHO05D006403 1.5e-33 147.1 207 41.5
CAN.G193.4 Capsicum annuum HOM05D005594 ORTHO05D006403 2.0e-33 146.7 211 42.2
SGA_v2.0_scaffold62G21352 Striga asiatica HOM05D000582 ORTHO05D006403 2.6e-33 146.4 217 40.6
arahy.Tifrunner.gnm1.ann1.7TC8PB Arachis hypogaea HOM05D005594 ORTHO05D006403 4.4e-33 145.6 206 42.2
arahy.Tifrunner.gnm1.ann1.X1J0TB Arachis hypogaea HOM05D005594 ORTHO05D006403 4.4e-33 145.6 206 42.2
Manes.18G056600 Manihot esculenta HOM05D005594 ORTHO05D006403 7.5e-33 144.8 205 42.4
MSTRG.24680 Avicennia marina HOM05D005594 ORTHO05D006403 9.8e-33 144.4 205 40.5
EL10Ac1g00491 Beta vulgaris HOM05D005594 ORTHO05D006403 9.8e-33 144.4 204 39.7
SGA_v2.0_scaffold13G06499 Striga asiatica HOM05D005594 ORTHO05D006403 9.8e-33 144.4 212 41.0
TWI31G0793 Tripterygium wilfordii HOM05D005594 ORTHO05D006403 9.8e-33 144.4 205 42.0
ECA248G0412 Erigeron canadensis HOM05D005594 ORTHO05D006403 1.3e-32 144.1 209 42.6
Cc10_g08520 Coffea canephora HOM05D005594 ORTHO05D006403 2.2e-32 143.3 206 40.8
Lsat_1_v5_gn_3_110060 Lactuca sativa HOM05D005594 ORTHO05D006403 3.7e-32 142.5 209 44.0
unitig_26.g9553 Utricularia gibba HOM05D005594 ORTHO05D006403 4.9e-32 142.1 210 40.0
MD08G1202600 Malus domestica HOM05D005594 ORTHO05D006403 1.8e-31 140.2 208 41.8
Glyma.06G098500 Glycine max HOM05D005594 ORTHO05D006403 1.2e-30 137.5 202 41.1
Medtr3g099850 Medicago truncatula HOM05D005594 ORTHO05D006403 1.6e-30 137.1 206 40.8
Potri.005G152200 Populus trichocarpa HOM05D005594 ORTHO05D006403 2.7e-30 136.3 204 42.2
TPR.G6332 Trifolium pratense HOM05D005594 ORTHO05D006403 2.7e-30 136.3 205 42.0
Cpa.g.sc1556.4 Carica papaya HOM05D005594 ORTHO05D006403 7.7e-30 134.8 156 48.7
Glyma.04G096700 Glycine max HOM05D005594 ORTHO05D006403 1.0e-29 134.4 204 39.7
THA.LOC104800630 Tarenaya hassleriana HOM05D005594 ORTHO05D006403 1.0e-29 134.4 205 39.0
FvH4_5g34380 Fragaria vesca HOM05D005594 ORTHO05D006403 1.3e-29 134.0 209 40.7
FAN08G3514 Fragaria x ananassa HOM05D005594 ORTHO05D006403 1.3e-29 134.0 209 40.7
FAN18G0194 Fragaria x ananassa HOM05D005594 ORTHO05D006403 1.3e-29 134.0 209 40.7
Ah.07g203840 Amaranthus hybridus HOM05D005594 ORTHO05D006403 1.7e-29 133.7 204 38.2
VMungo1309G0327 Vigna mungo HOM05D005594 ORTHO05D006403 2.3e-29 133.3 204 38.7
RcHm_v2.0_Chr7g0234971 Rosa chinensis HOM05D005594 ORTHO05D006403 3.8e-29 132.5 210 40.5
FAN04G0064 Fragaria x ananassa HOM05D005594 ORTHO05D006403 6.6e-29 131.7 200 41.0
ATR0767G044 Amborella trichopoda HOM05D005594 ORTHO05D006403 8.6e-29 131.3 202 41.1
DCAR_028088 Daucus carota HOM05D005594 ORTHO05D006403 8.6e-29 131.3 204 40.7
Lalb_Chr23g0269971 Lupinus albus HOM05D005594 ORTHO05D006403 8.6e-29 131.3 205 39.5
Sabra05G0119000 Salix brachista HOM05D005594 ORTHO05D006403 1.1e-28 131.0 204 41.2
Phvul.009G035100 Phaseolus vulgaris HOM05D005594 ORTHO05D006403 1.5e-28 130.6 204 38.7
Lj1g0021697 Lotus japonicus HOM05D005594 ORTHO05D006403 1.9e-28 130.2 205 40.5
CiPaw.01G112000 Carya illinoinensis HOM05D005594 ORTHO05D006403 7.3e-28 128.3 150 50.7
Pp3c26_12080 Physcomitrium patens HOM05D005594 ORTHO05D006403 3.6e-27 125.9 197 40.1
Aa31LG1G6880 Aethionema arabicum HOM05D005594 ORTHO05D006403 6.1e-27 125.2 205 36.1
Os01g0911000 Oryza sativa ssp. japonica HOM05D005594 ORTHO05D006403 1.4e-26 124.0 161 44.1
Ca_26381_v3 Cicer arietinum L. HOM05D005594 ORTHO05D006403 1.8e-26 123.6 203 38.4
Psat5g049560 Pisum sativum HOM05D005594 ORTHO05D006403 4.0e-26 122.5 205 36.1
Ca_11286_v3 Cicer arietinum L. HOM05D005594 ORTHO05D006403 8.9e-26 121.3 203 37.9
SEGI_07360 Sequoiadendron giganteum HOM05D005594 ORTHO05D006403 1.5e-25 120.6 158 43.7
AUR62014367 Chenopodium quinoa HOM05D005594 ORTHO05D006403 3.4e-25 119.4 205 37.6
SMO140G0091 Selaginella moellendorffii HOM05D005594 ORTHO05D006403 4.4e-25 119.0 150 42.7
Zm00001eb388820 Zea mays HOM05D005594 ORTHO05D006403 4.4e-25 119.0 161 44.1
Aqoxy5G01356 Aquilegia oxysepala HOM05D005594 ORTHO05D006403 5.7e-25 118.6 202 36.6
AUR62019109 Chenopodium quinoa HOM05D005594 ORTHO05D006403 7.5e-25 118.2 205 36.6
CARHR007650 Cardamine hirsuta HOM05D005594 ORTHO05D006403 2.2e-24 116.7 204 37.7
AT1G07840 Arabidopsis thaliana HOM05D005594 ORTHO05D006403 4.9e-24 115.5 202 34.7
Mapoly0041s0093 Marchantia polymorpha HOM05D005056 ORTHO05D006403 2.4e-23 113.2 150 41.3
Carub.0001s0718 Capsella rubella HOM05D005594 ORTHO05D006403 7.0e-23 111.7 204 37.3
PSO170G0052 Papaver somniferum HOM05D005594 ORTHO05D006403 2.0e-22 110.2 211 36.5
PSO541G2296 Papaver somniferum HOM05D005594 ORTHO05D006403 2.0e-22 110.2 205 37.1
AL1G18120 Arabidopsis lyrata HOM05D005594 ORTHO05D006403 4.6e-22 109.0 204 35.8
PSO675G6381 Papaver somniferum HOM05D005594 ORTHO05D006403 1.0e-21 107.8 205 37.6
Sp1g06520 Schrenkiella parvula HOM05D005594 ORTHO05D006403 1.3e-21 107.5 204 34.3
C05p05910 Brassica napus HOM05D005594 ORTHO05D006403 3.9e-21 105.9 201 35.3
A06p04960 Brassica napus HOM05D005594 ORTHO05D006403 5.0e-21 105.5 201 35.3
BolC5t29354H Brassica oleracea HOM05D000310 ORTHO05D000509 5.0e-21 105.5 201 35.3
BraA06t23703Z Brassica rapa HOM05D005594 ORTHO05D006403 5.0e-21 105.5 201 35.3
Thhalv10008245m.g Eutrema salsugineum HOM05D005594 ORTHO05D006403 1.5e-20 104.0 158 39.2
Lj4g0023762 Lotus japonicus HOM05D005594 ORTHO05D006403 3.3e-20 102.8 151 39.1
AagrBONN_evm.TU.Sc2ySwM_117.2374 Anthoceros agrestis HOM05D005594 ORTHO05D006403 5.6e-20 102.1 149 38.3
HanXRQChr13g0407601 Helianthus annuus HOM05D005594 ORTHO05D006403 7.3e-20 101.7 130 46.2
Aqoxy4G03010 Aquilegia oxysepala HOM05D005594 ORTHO05D006403 1.8e-18 97.1 141 39.7
Zm00001eb365030 Zea mays HOM05D005594 ORTHO05D006403 1.2e-17 94.4 198 35.4
CBR_g34512 Chara braunii HOM05D005056 ORTHO05D006403 3.4e-17 92.8 168 32.1
Lj4A740T30 Lonicera japonica HOM05D005594 ORTHO05D006403 1.4e-15 87.4 156 40.4
AagrBONN_evm.TU.Sc2ySwM_228.4407 Anthoceros agrestis HOM05D005056 ORTHO05D006403 4.1e-15 85.9 199 29.1
CAN.G375.34 Capsicum annuum HOM05D005594 ORTHO05D006403 1.6e-14 84.0 92 48.9
MCO16G233 Micromonas commoda HOM05D005594 ORTHO05D006403 1.5e-12 77.4 183 33.3
HanXRQChr15g0472131 Helianthus annuus HOM05D005594 ORTHO05D006403 3.6e-11 72.8 125 36.8
HanXRQChr17g0561001 Helianthus annuus HOM05D005594 ORTHO05D006403 1.2e-09 67.8 78 47.4
Oeu034716.2 Olea europaea HOM05D005594 ORTHO05D006403 3.4e-09 66.2 90 43.3
Zm00001eb306590 Zea mays HOM05D005594 ORTHO05D006403 1.2e-06 57.8 64 48.4
Cre09.g394399 Chlamydomonas reinhardtii HOM05D005056 ORTHO05D006403 2.1e-06 57.0 192 29.2


User provided reference genes

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