Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG11G012350 Citrullus lanatus HOM05D000003 ORTHO05D000004 4.7e-88 327.8 161 100.0
ClCG02G006510 Citrullus lanatus HOM05D000003 ORTHO05D000004 1.2e-43 180.3 182 52.2
ClCG05G011780 Citrullus lanatus HOM05D000003 ORTHO05D000004 2.8e-16 89.4 171 30.4
ClCG06G006800 Citrullus lanatus HOM05D000176 ORTHO05D000013 4.5e-14 82.0 141 32.6
ClCG07G008810 Citrullus lanatus HOM05D000003 ORTHO05D000004 7.7e-14 81.3 50 70.0
Sed0015894 Sechium edule HOM05D000003 ORTHO05D000004 3.6e-11 72.4 155 31.0
ClCG10G006050 Citrullus lanatus HOM05D000003 ORTHO05D000004 8.0e-11 71.2 126 29.4
ClCG05G019380 Citrullus lanatus HOM05D000003 ORTHO05D000004 2.6e-09 66.2 47 59.6
CANSAT01G3175 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-08 63.9 57 49.1
ClCG10G002860 Citrullus lanatus HOM05D000003 ORTHO05D000004 1.7e-08 63.5 50 54.0
MELO3C022264.2 Cucumis melo HOM05D000003 ORTHO05D000004 2.2e-08 63.2 166 27.1
PSO302G0073 Papaver somniferum HOM05D000003 ORTHO05D000004 6.3e-08 61.6 165 27.3
QL12p039879 Quercus lobata HOM05D000003 ORTHO05D000004 6.3e-08 61.6 204 23.5
Hund30603 Selenicereus undatus HOM05D000003 ORTHO05D000004 8.2e-08 61.2 50 52.0
Hund30604 Selenicereus undatus HOM05D000003 ORTHO05D000004 8.2e-08 61.2 50 52.0
Atru.chr8.2073 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-07 60.8 211 24.2
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 1.1e-07 60.8 49 53.1
Hund12803 Selenicereus undatus HOM05D000003 ORTHO05D000004 1.4e-07 60.5 50 52.0
PSO349G0279 Papaver somniferum HOM05D000003 ORTHO05D000004 1.8e-07 60.1 169 24.9
PSO675G3943 Papaver somniferum HOM05D000003 ORTHO05D000004 1.8e-07 60.1 166 27.7
Hund20535 Selenicereus undatus HOM05D000003 ORTHO05D000004 3.1e-07 59.3 50 52.0
Atru.chr8.1166 Acer truncatum HOM05D003047 ORTHO05D000627 4.1e-07 58.9 128 32.8
Aqoxy4G01729 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.1e-07 58.9 180 26.1
ClCG05G011070 Citrullus lanatus HOM05D000003 ORTHO05D000004 5.3e-07 58.5 127 29.9
HanXRQChr04g0113211 Helianthus annuus HOM05D000003 ORTHO05D000004 5.3e-07 58.5 50 50.0
Hund14265 Selenicereus undatus HOM05D003118 ORTHO05D003618 5.3e-07 58.5 50 52.0
CSS0007786 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.0e-07 58.2 50 50.0
CSS0040993 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.0e-07 58.2 96 35.4
PSO017G4751 Papaver somniferum HOM05D000003 ORTHO05D000004 7.0e-07 58.2 109 32.1
PSO832G4384 Papaver somniferum HOM05D000003 ORTHO05D000004 7.0e-07 58.2 152 27.0
QL08p027209 Quercus lobata HOM05D000003 ORTHO05D000004 7.0e-07 58.2 90 32.2
ClCG03G010470 Citrullus lanatus HOM05D000003 ORTHO05D000004 9.1e-07 57.8 149 25.5
MD02G1293300 Malus domestica HOM05D000003 ORTHO05D000004 9.1e-07 57.8 63 38.1
ClCG04G012890 Citrullus lanatus HOM05D000003 ORTHO05D000004 1.2e-06 57.4 50 48.0
ClCG05G011290 Citrullus lanatus HOM05D000003 ORTHO05D000004 1.2e-06 57.4 202 24.3
QL01p047991 Quercus lobata HOM05D000399 ORTHO05D000304 1.2e-06 57.4 49 49.0
QL93p0089_0059 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-06 57.4 49 46.9
QL93p0340_0006 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-06 57.4 49 46.9
CSS0009894 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-06 57.0 61 41.0
CSS0044712 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-06 57.0 171 27.5
MBI17_g14629_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.6e-06 57.0 50 44.0
PSO675G2039 Papaver somniferum HOM05D000003 ORTHO05D000004 2.0e-06 56.6 119 26.9
CSS0007662 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.6e-06 56.2 50 48.0
CiPaw.11G108300 Carya illinoinensis HOM05D007585 ORTHO05D009515 2.6e-06 56.2 49 44.9
ClCG08G005070 Citrullus lanatus HOM05D000003 ORTHO05D016241 2.6e-06 56.2 153 28.1
GSVIVG01037358001 Vitis vinifera HOM05D004500 ORTHO05D005775 2.6e-06 56.2 49 46.9
MD06G1023000 Malus domestica HOM05D000003 ORTHO05D000004 3.5e-06 55.8 63 34.9
PSO151G0217 Papaver somniferum HOM05D000003 ORTHO05D000004 3.5e-06 55.8 50 46.0
PSO302G0219 Papaver somniferum HOM05D000003 ORTHO05D000004 3.5e-06 55.8 50 48.0
Hund00002 Selenicereus undatus HOM05D005986 ORTHO05D007467 3.5e-06 55.8 52 50.0
Atru.chr4.2177 Acer truncatum HOM05D000003 ORTHO05D000004 4.5e-06 55.5 49 51.0
Manes.09G048028 Manihot esculenta HOM05D000003 ORTHO05D000004 4.5e-06 55.5 108 29.6
Cpa.g.sc214.3 Carica papaya HOM05D000003 ORTHO05D000004 5.9e-06 55.1 133 31.6
CSS0041535 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.7e-06 54.7 81 34.6
ECA248G2389 Erigeron canadensis HOM05D000003 ORTHO05D000004 7.7e-06 54.7 50 50.0
HanXRQChr17g0536011 Helianthus annuus HOM05D000003 ORTHO05D000004 7.7e-06 54.7 50 44.0
PSO384G2607 Papaver somniferum HOM05D000003 ORTHO05D000004 7.7e-06 54.7 50 48.0
TPR.G40209 Trifolium pratense HOM05D000003 ORTHO05D000004 7.7e-06 54.7 73 45.2
GSVIVG01004860001 Vitis vinifera HOM05D000660 ORTHO05D000766 7.7e-06 54.7 49 42.9


User provided reference genes

Program Settings