Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG11G012230 Citrullus lanatus HOM05D007179 ORTHO05D009124 3.4e-121 438.3 221 100.0
Sed0008122 Sechium edule HOM05D007179 ORTHO05D009124 2.2e-51 206.5 120 86.7
MELO3C004033.2 Cucumis melo HOM05D007179 ORTHO05D009124 4.8e-51 205.3 113 91.2
CsaV3_2G008330 Cucumis sativus L. HOM05D007179 ORTHO05D009124 1.5e-47 193.7 113 88.5
arahy.Tifrunner.gnm1.ann1.7FN6WP Arachis hypogaea HOM05D007179 ORTHO05D009124 6.1e-38 161.8 115 72.2
arahy.Tifrunner.gnm1.ann1.8TJD28 Arachis hypogaea HOM05D007179 ORTHO05D009124 1.8e-37 160.2 115 72.2
Medtr4g129320 Medicago truncatula HOM05D007179 ORTHO05D009124 1.8e-37 160.2 119 67.2
CiPaw.07G187200 Carya illinoinensis HOM05D007179 ORTHO05D009124 3.0e-37 159.5 117 70.1
Psat0s236g0160 Pisum sativum HOM05D007179 ORTHO05D009124 6.8e-37 158.3 120 65.0
Cpa.g.c29666.1 Carica papaya HOM05D007179 ORTHO05D009124 8.9e-37 157.9 115 68.7
Glyma.17G067900 Glycine max HOM05D007179 ORTHO05D009124 1.2e-36 157.5 116 69.8
CANSAT11G0330 Cannabis sativa HOM05D007179 ORTHO05D009124 9.8e-36 154.5 116 68.1
TWI63G0613 Tripterygium wilfordii HOM05D007179 ORTHO05D009124 6.4e-35 151.8 115 67.8
Rhsim01G0010000 Rhododendron simsii HOM05D007179 ORTHO05D009124 8.3e-35 151.4 115 67.8
Lj4g0019685 Lotus japonicus HOM05D007179 ORTHO05D009124 2.4e-34 149.8 133 61.7
Lalb_Chr13g0300481 Lupinus albus HOM05D007179 ORTHO05D009124 3.2e-34 149.4 125 64.0
CiPaw.08G039500 Carya illinoinensis HOM05D007179 ORTHO05D009124 5.4e-34 148.7 117 66.7
Nn1g04316 Nelumbo nucifera HOM05D007179 ORTHO05D009124 2.0e-33 146.7 114 69.3
Dinv41297 Davidia involucrata HOM05D007179 ORTHO05D009124 1.7e-32 143.7 115 67.0
Gohir.D05G007500 Gossypium hirsutum HOM05D007179 ORTHO05D009124 2.3e-32 143.3 115 67.8
Gorai.009G007600 Gossypium raimondii HOM05D007179 ORTHO05D009124 3.0e-32 142.9 115 67.8
Atru.chr7.533 Acer truncatum HOM05D007179 ORTHO05D009124 3.9e-32 142.5 113 68.1
Potri.006G175600 Populus trichocarpa HOM05D007179 ORTHO05D009124 5.0e-32 142.1 115 65.2
RcHm_v2.0_Chr4g0404651 Rosa chinensis HOM05D007179 ORTHO05D009124 8.6e-32 141.4 118 63.6
Gohir.A05G006600 Gossypium hirsutum HOM05D007179 ORTHO05D009124 1.1e-31 141.0 115 67.0
VMungo1215G3157 Vigna mungo HOM05D007179 ORTHO05D009124 1.5e-31 140.6 112 67.0
SalBow1G0390 Salvia bowleyana HOM05D007179 ORTHO05D009124 3.3e-31 139.4 144 54.9
Thecc.09G162500 Theobroma cacao HOM05D007179 ORTHO05D009124 3.3e-31 139.4 115 67.8
MSTRG.26242 Avicennia marina HOM05D007179 ORTHO05D009124 4.3e-31 139.0 110 68.2
ECA236G0374 Erigeron canadensis HOM05D007179 ORTHO05D009124 4.3e-31 139.0 117 59.8
FvH4_4g08570 Fragaria vesca HOM05D007179 ORTHO05D009124 4.3e-31 139.0 119 63.0
Oeu058831.1 Olea europaea HOM05D007179 ORTHO05D009124 4.3e-31 139.0 114 64.9
Lsat_1_v5_gn_8_65641 Lactuca sativa HOM05D007179 ORTHO05D009124 5.6e-31 138.7 116 59.5
Phvul.003G150500 Phaseolus vulgaris HOM05D007179 ORTHO05D009124 5.6e-31 138.7 119 62.2
Prupe.1G095600 Prunus persica HOM05D007179 ORTHO05D009124 7.3e-31 138.3 116 62.1
Sabra06G0134300 Salix brachista HOM05D007179 ORTHO05D009124 9.5e-31 137.9 115 61.7
TAR626G0641 Trochodendron aralioides HOM05D007179 ORTHO05D009124 1.6e-30 137.1 117 62.4
GSVIVG01032307001 Vitis vinifera HOM05D007179 ORTHO05D009124 1.6e-30 137.1 117 64.1
CSS0047035 Camellia sinensis var. sinensis HOM05D007179 ORTHO05D009124 2.1e-30 136.7 115 63.5
Actinidia24032 Actinidia chinensis HOM05D007179 ORTHO05D009124 3.1e-29 132.9 102 68.6
MD16G1263600 Malus domestica HOM05D007179 ORTHO05D009124 4.0e-29 132.5 113 61.1
PGR102G1777 Punica granatum HOM05D007179 ORTHO05D009124 5.2e-29 132.1 108 63.9
THA.LOC104811817 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 5.2e-29 132.1 133 57.9
Ciclev10009752m.g Citrus clementina HOM05D007179 ORTHO05D009124 6.8e-29 131.7 124 57.3
THA.LOC104817810 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 2.6e-28 129.8 114 61.4
DCAR_017946 Daucus carota HOM05D007179 ORTHO05D009124 4.4e-28 129.0 116 63.8
Eucgr.C02437 Eucalyptus grandis HOM05D007179 ORTHO05D009124 4.4e-28 129.0 98 68.4
Migut.K00269 Erythranthe guttata HOM05D007179 ORTHO05D009124 7.5e-28 128.3 122 58.2
COL.COLO4_16058 Corchorus olitorius HOM05D007179 ORTHO05D009124 1.3e-27 127.5 101 70.3
Hund08993 Selenicereus undatus HOM05D007179 ORTHO05D009124 2.9e-27 126.3 145 52.4
Manes.06G029800 Manihot esculenta HOM05D007179 ORTHO05D009124 3.7e-27 125.9 112 60.7
Peaxi162Scf00457g00318 Petunia axillaris HOM05D007179 ORTHO05D009124 3.7e-27 125.9 107 61.7
Lj9A729T43 Lonicera japonica HOM05D007179 ORTHO05D009124 1.1e-26 124.4 117 58.1
MBI15_g26085_MAGBIO Magnolia biondii HOM05D007179 ORTHO05D009124 1.1e-26 124.4 98 66.3
HanXRQChr05g0136491 Helianthus annuus HOM05D007179 ORTHO05D009124 1.9e-26 123.6 112 60.7
vmacro13080 Vaccinium macrocarpon HOM05D007179 ORTHO05D009124 1.9e-26 123.6 85 75.3
Nitab4.5_0011540g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 3.2e-26 122.9 98 65.3
BcaNung01603 Brassica carinata HOM05D007179 ORTHO05D009124 5.4e-26 122.1 135 54.8
Duzib150G1658 Durio zibethinus HOM05D007179 ORTHO05D009124 7.0e-26 121.7 96 67.7
EL10Ac8g18859 Beta vulgaris HOM05D007179 ORTHO05D009124 9.2e-26 121.3 90 67.8
Thhalv10026434m.g Eutrema salsugineum HOM05D007179 ORTHO05D009124 9.2e-26 121.3 114 59.6
Sc14g0001110 Simmondsia chinensis HOM05D007179 ORTHO05D009124 9.2e-26 121.3 101 65.3
BolC1t02394H Brassica oleracea HOM05D007179 ORTHO05D009124 1.2e-25 120.9 116 58.6
C01p24450 Brassica napus HOM05D007179 ORTHO05D009124 1.6e-25 120.6 114 58.8
FAN22G0121 Fragaria x ananassa HOM05D007179 ORTHO05D009124 1.6e-25 120.6 85 75.3
PGSC0003DMG400027448 Solanum tuberosum HOM05D007179 ORTHO05D009124 2.0e-25 120.2 100 62.0
AL7G24590 Arabidopsis lyrata HOM05D007179 ORTHO05D009124 2.7e-25 119.8 115 58.3
BraA01t01881Z Brassica rapa HOM05D007179 ORTHO05D009124 2.7e-25 119.8 145 50.3
Cc06_g13840 Coffea canephora HOM05D007179 ORTHO05D009124 2.7e-25 119.8 116 56.9
Solyc07g006490.3 Solanum lycopersicum HOM05D007179 ORTHO05D009124 2.7e-25 119.8 135 48.9
A01p19410 Brassica napus HOM05D007179 ORTHO05D009124 3.5e-25 119.4 145 49.7
Sp7g25970 Schrenkiella parvula HOM05D007179 ORTHO05D009124 4.6e-25 119.0 111 60.4
Sopen07g002570 Solanum pennellii HOM05D007179 ORTHO05D009124 6.0e-25 118.6 135 48.1
Aa31LG3G160 Aethionema arabicum HOM05D007179 ORTHO05D009124 1.0e-24 117.9 111 58.6
C07p55870 Brassica napus HOM05D007179 ORTHO05D009124 1.0e-24 117.9 113 61.1
Carub.0007s1277 Capsella rubella HOM05D007179 ORTHO05D009124 1.7e-24 117.1 115 58.3
AT4G28025 Arabidopsis thaliana HOM05D007179 ORTHO05D009124 2.3e-24 116.7 115 58.3
BraA03t14832Z Brassica rapa HOM05D007179 ORTHO05D009124 2.3e-24 116.7 113 60.2
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 3.0e-24 116.3 114 57.9
A03p57660 Brassica napus HOM05D007179 ORTHO05D009124 3.9e-24 115.9 113 60.2
AUR62040282 Chenopodium quinoa HOM05D007179 ORTHO05D009124 3.9e-24 115.9 86 69.8
BcaC06g32651 Brassica carinata HOM05D007179 ORTHO05D009124 5.0e-24 115.5 113 60.2
FAN17G2417 Fragaria x ananassa HOM05D007179 ORTHO05D009124 1.5e-23 114.0 72 80.6
HPP92_018535 Vanilla planifolia HOM05D007179 ORTHO05D009124 1.5e-23 114.0 101 56.4
CAN.G584.44 Capsicum annuum HOM05D007179 ORTHO05D009124 1.9e-23 113.6 105 60.0
Ca_21187_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009942 4.3e-23 112.5 75 76.0
Aqoxy7G03201 Aquilegia oxysepala HOM05D007179 ORTHO05D009124 5.6e-23 112.1 138 47.8
AUR62039974 Chenopodium quinoa HOM05D007179 ORTHO05D009124 5.6e-23 112.1 107 60.7
Hund26395 Selenicereus undatus HOM05D007179 ORTHO05D009124 5.6e-23 112.1 130 51.5
CARHR235720 Cardamine hirsuta HOM05D007179 ORTHO05D009124 4.7e-22 109.0 112 55.4
Actinidia24777 Actinidia chinensis HOM05D007179 ORTHO05D009124 6.2e-22 108.6 70 78.6
unitig_37.g12688 Utricularia gibba HOM05D007179 ORTHO05D009124 6.8e-21 105.1 109 55.0
Nitab4.5_0002004g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 1.2e-20 104.4 73 71.2
PSO063G6628 Papaver somniferum HOM05D007179 ORTHO05D009124 9.8e-20 101.3 88 60.2
PSO782G3484 Papaver somniferum HOM05D007179 ORTHO05D009124 1.3e-19 100.9 88 60.2
Zm00001eb246810 Zea mays HOM05D007179 ORTHO05D009124 2.2e-19 100.1 124 50.8
CDE05G2983 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 3.7e-19 99.4 87 59.8
CDE02G2992 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 6.4e-19 98.6 87 58.6
ATR0580G253 Amborella trichopoda HOM05D007179 ORTHO05D009124 1.9e-18 97.1 114 46.5
Medtr4g129300 Medicago truncatula HOM05D007179 ORTHO05D009124 5.4e-18 95.5 65 73.8
Mapoly0124s0027 Marchantia polymorpha HOM05D007179 ORTHO05D009124 2.1e-17 93.6 77 59.7
AagrBONN_evm.TU.Sc2ySwM_362.2423 Anthoceros agrestis HOM05D007179 ORTHO05D009124 3.5e-17 92.8 74 62.2
SMO358G0032 Selaginella moellendorffii HOM05D007179 ORTHO05D009124 3.9e-16 89.4 99 48.5
SGA_v2.0_scaffold325G48698 Striga asiatica HOM05D007179 ORTHO05D009124 1.1e-15 87.8 78 60.3
Pp3c12_25950 Physcomitrium patens HOM05D007179 ORTHO05D009124 2.8e-14 83.2 74 52.7
Haze_22156 Corylus avellana HOM05D007179 ORTHO05D009124 6.2e-14 82.0 67 61.2
BcaC09g50519 Brassica carinata HOM05D000147 ORTHO05D013131 5.2e-13 79.0 57 68.4
Haze_22155 Corylus avellana HOM05D007179 ORTHO05D009124 6.4e-11 72.0 47 74.5
Dinv42771 Davidia involucrata HOM05D007179 ORTHO05D009124 4.3e-07 59.3 69 50.7
Zm00001eb184420 Zea mays HOM05D007179 ORTHO05D009124 8.1e-06 55.1 97 38.1


User provided reference genes

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