Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG11G008540 Citrullus lanatus HOM05D007776 ORTHO05D009812 7.5e-74 280.4 139 100.0
Sed0008767 Sechium edule HOM05D007776 ORTHO05D009812 4.9e-41 171.4 137 66.4
RcHm_v2.0_Chr7g0227891 Rosa chinensis HOM05D007776 ORTHO05D009812 1.0e-22 110.5 142 47.2
TWI59G0674 Tripterygium wilfordii HOM05D007776 ORTHO05D009812 1.9e-21 106.3 123 52.0
Prupe.1G555000 Prunus persica HOM05D007776 ORTHO05D009812 4.3e-21 105.1 113 51.3
CANSAT25G0596 Cannabis sativa HOM05D007776 ORTHO05D009812 2.1e-20 102.8 111 49.5
Ciclev10002690m.g Citrus clementina HOM05D007776 ORTHO05D009812 4.7e-20 101.7 129 48.8
MD15G1406800 Malus domestica HOM05D007776 ORTHO05D009812 6.2e-20 101.3 147 48.3
Manes.02G198100 Manihot esculenta HOM05D007776 ORTHO05D009812 6.2e-20 101.3 139 45.3
Potri.013G107300 Populus trichocarpa HOM05D007776 ORTHO05D009812 6.2e-20 101.3 140 45.7
TWI14G0313 Tripterygium wilfordii HOM05D007776 ORTHO05D009812 8.1e-20 100.9 139 46.0
Haze_21304 Corylus avellana HOM05D007776 ORTHO05D009812 1.1e-19 100.5 140 46.4
FAN04G1877 Fragaria x ananassa HOM05D007776 ORTHO05D009812 1.4e-19 100.1 143 46.9
FAN04G0521 Fragaria x ananassa HOM05D007776 ORTHO05D009812 1.8e-19 99.8 143 46.9
FAN08G2421 Fragaria x ananassa HOM05D007776 ORTHO05D009812 4.0e-19 98.6 143 46.2
FvH4_5g31870 Fragaria vesca HOM05D007776 ORTHO05D009812 6.8e-19 97.8 143 46.2
CiPaw.07G236300 Carya illinoinensis HOM05D007776 ORTHO05D009812 8.9e-19 97.4 139 47.5
Cfa012949 Carpinus fangiana HOM05D007776 ORTHO05D009812 1.2e-18 97.1 139 44.6
Sabra19G0091100 Salix brachista HOM05D007776 ORTHO05D009812 1.5e-18 96.7 139 46.0
Potri.019G079800 Populus trichocarpa HOM05D007776 ORTHO05D009812 2.0e-18 96.3 140 44.3
FAN18G1270 Fragaria x ananassa HOM05D007776 ORTHO05D009812 2.6e-18 95.9 135 45.2
CiPaw.05G123100 Carya illinoinensis HOM05D007776 ORTHO05D009812 7.6e-18 94.4 139 46.8
PGR042G2621 Punica granatum HOM05D007776 ORTHO05D009812 9.9e-18 94.0 149 45.0
Sabra13G0092600 Salix brachista HOM05D007776 ORTHO05D009812 3.8e-17 92.0 139 45.3
THA.LOC104806792 Tarenaya hassleriana HOM05D007776 ORTHO05D009812 6.4e-17 91.3 155 43.2
Ca_14480_v3 Cicer arietinum L. HOM05D007776 ORTHO05D009812 1.9e-16 89.7 115 44.3
BcaC08g43737 Brassica carinata HOM05D007776 ORTHO05D009812 9.3e-16 87.4 117 47.0
VMungo1080G1686 Vigna mungo HOM05D007776 ORTHO05D009812 9.3e-16 87.4 114 44.7
C06p11140 Brassica napus HOM05D007776 ORTHO05D009812 1.2e-15 87.0 117 47.0
BolC6t36249H Brassica oleracea HOM05D007776 ORTHO05D009812 1.2e-15 87.0 117 47.0
AT1G35430 Arabidopsis thaliana HOM05D007776 ORTHO05D009812 1.6e-15 86.7 110 48.2
CARHR034200 Cardamine hirsuta HOM05D007776 ORTHO05D009812 2.7e-15 85.9 107 46.7
BraA09t38716Z Brassica rapa HOM05D007776 ORTHO05D009812 3.5e-15 85.5 117 46.2
AL1G50270 Arabidopsis lyrata HOM05D007776 ORTHO05D009812 6.0e-15 84.7 109 47.7
Dinv41753 Davidia involucrata HOM05D000238 ORTHO05D002999 7.8e-15 84.3 115 43.5
Gohir.D05G288000 Gossypium hirsutum HOM05D007776 ORTHO05D009812 1.0e-14 84.0 137 40.9
Gorai.009G303100 Gossypium raimondii HOM05D007776 ORTHO05D009812 1.0e-14 84.0 137 40.9
Sp1g30150 Schrenkiella parvula HOM05D007776 ORTHO05D009812 1.3e-14 83.6 108 47.2
Gohir.A05G287000 Gossypium hirsutum HOM05D007776 ORTHO05D009812 1.7e-14 83.2 137 40.9
A09p31800 Brassica napus HOM05D007776 ORTHO05D009812 3.0e-14 82.4 111 45.9
Psat5g210040 Pisum sativum HOM05D007776 ORTHO05D009812 3.9e-14 82.0 135 40.0
Cpa.g.sc507.3 Carica papaya HOM05D007776 ORTHO05D009812 8.7e-14 80.9 118 44.1
Carub.0001s3303 Capsella rubella HOM05D007776 ORTHO05D009812 1.1e-13 80.5 111 46.8
Duzib177G0943 Durio zibethinus HOM05D007776 ORTHO05D009812 1.5e-13 80.1 122 41.8
Medtr0045s0130 Medicago truncatula HOM05D007776 ORTHO05D009812 1.5e-13 80.1 113 42.5
Phvul.005G023800 Phaseolus vulgaris HOM05D007776 ORTHO05D009812 2.5e-13 79.3 112 44.6
Nn5g27525 Nelumbo nucifera HOM05D007776 ORTHO05D009812 4.3e-13 78.6 136 37.5
Aa31LG6G8730 Aethionema arabicum HOM05D007776 ORTHO05D009812 7.3e-13 77.8 109 45.9
Lalb_Chr25g0282901 Lupinus albus HOM05D007776 ORTHO05D009812 1.6e-12 76.6 113 41.6
Lj3g0020626 Lotus japonicus HOM05D007776 ORTHO05D009812 3.6e-12 75.5 114 44.7
Duzib116G0238 Durio zibethinus HOM05D007776 ORTHO05D009812 1.1e-11 73.9 120 35.8
TPR.G27845 Trifolium pratense HOM05D000479 ORTHO05D009812 2.4e-11 72.8 137 34.3
QL02p026198 Quercus lobata HOM05D007776 ORTHO05D009812 3.1e-11 72.4 138 37.7
Thhalv10001838m.g Eutrema salsugineum HOM05D007776 ORTHO05D009812 6.9e-11 71.2 117 43.6
Solyc01g087860.2 Solanum lycopersicum HOM05D007776 ORTHO05D009812 2.6e-10 69.3 114 42.1
CSS0049282 Camellia sinensis var. sinensis HOM05D007776 ORTHO05D009812 5.8e-10 68.2 108 40.7
Thhalv10029064m.g Eutrema salsugineum HOM05D007776 ORTHO05D009812 9.9e-10 67.4 131 36.6
Thecc.08G190700 Theobroma cacao HOM05D007776 ORTHO05D009812 1.7e-09 66.6 117 35.0
Migut.C01313 Erythranthe guttata HOM05D007776 ORTHO05D009812 3.8e-09 65.5 119 37.8
Glyma.15G276200 Glycine max HOM05D007776 ORTHO05D009812 3.8e-09 65.5 82 46.3
Sopen01g034790 Solanum pennellii HOM05D007776 ORTHO05D009812 3.8e-09 65.5 112 42.0
PGSC0003DMG400006837 Solanum tuberosum HOM05D007776 ORTHO05D009812 3.8e-09 65.5 117 40.2
CARHR260240 Cardamine hirsuta HOM05D007776 ORTHO05D009812 8.4e-09 64.3 106 36.8
Sp6g08370 Schrenkiella parvula HOM05D007776 ORTHO05D009812 5.4e-08 61.6 109 33.9
Glyma.10G090400 Glycine max HOM05D007776 ORTHO05D009812 7.1e-08 61.2 80 42.5
Lsat_1_v5_gn_3_48301 Lactuca sativa HOM05D007776 ORTHO05D009812 1.2e-07 60.5 119 37.8
Ah.05g178510 Amaranthus hybridus HOM05D007776 ORTHO05D009812 4.6e-07 58.5 119 37.8
TAR628G0395 Trochodendron aralioides HOM05D007776 ORTHO05D009812 7.9e-07 57.8 108 37.0
Cc10_g10000 Coffea canephora HOM05D007776 ORTHO05D009812 3.0e-06 55.8 109 39.4
MD08G1218400 Malus domestica HOM05D007776 ORTHO05D009812 3.0e-06 55.8 78 41.0
COL.COLO4_25869 Corchorus olitorius HOM05D007776 ORTHO05D009812 3.9e-06 55.5 54 46.3
BcaC01g04727 Brassica carinata HOM05D007776 ORTHO05D009812 5.1e-06 55.1 132 35.6
SalBow7G1484 Salvia bowleyana HOM05D007776 ORTHO05D009812 5.1e-06 55.1 82 36.6
Rhsim12G0006900 Rhododendron simsii HOM05D007776 ORTHO05D009812 6.6e-06 54.7 97 41.2


User provided reference genes

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