Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG11G008520 Citrullus lanatus HOM05D000014 ORTHO05D000016 8.0e-149 530.4 268 100.0
ClCG02G010720 Citrullus lanatus HOM05D000014 ORTHO05D000016 8.8e-55 218.0 276 51.4
ClCG10G006240 Citrullus lanatus HOM05D000014 ORTHO05D000016 1.1e-36 157.9 281 40.6
ClCG05G013100 Citrullus lanatus HOM05D000014 ORTHO05D000093 3.6e-32 142.9 277 38.6
ClCG07G006040 Citrullus lanatus HOM05D000014 ORTHO05D000016 2.8e-29 133.3 278 38.5
CANSAT25G2739 Cannabis sativa HOM05D000014 ORTHO05D000016 2.5e-25 120.2 293 33.1
CANSAT80G0547 Cannabis sativa HOM05D000014 ORTHO05D000016 2.5e-25 120.2 293 32.8
CANSAT54G2205 Cannabis sativa HOM05D000014 ORTHO05D000016 3.2e-25 119.8 306 32.4
CANSAT01G1538 Cannabis sativa HOM05D000014 ORTHO05D000016 3.6e-24 116.3 309 32.4
CANSAT78G1031 Cannabis sativa HOM05D000014 ORTHO05D000016 1.0e-23 114.8 310 32.6
CANSAT01G1394 Cannabis sativa HOM05D000014 ORTHO05D000016 1.4e-23 114.4 301 31.2
CANSAT01G2079 Cannabis sativa HOM05D000014 ORTHO05D000016 1.8e-23 114.0 309 32.4
CANSAT25G0834 Cannabis sativa HOM05D000014 ORTHO05D000016 1.8e-23 114.0 305 33.8
CANSAT64G2873 Cannabis sativa HOM05D000014 ORTHO05D000016 1.8e-23 114.0 171 40.4
ClCG05G011870 Citrullus lanatus HOM05D000014 ORTHO05D000016 1.8e-23 114.0 237 33.8
CANSAT11G1285 Cannabis sativa HOM05D000014 ORTHO05D000016 8.8e-23 111.7 171 39.2
CANSAT25G2186 Cannabis sativa HOM05D000014 ORTHO05D000016 2.6e-22 110.2 309 32.7
CANSAT78G1781 Cannabis sativa HOM05D000014 ORTHO05D000016 3.4e-22 109.8 271 34.7
CANSAT78G2236 Cannabis sativa HOM05D000014 ORTHO05D000016 5.7e-22 109.0 156 40.4
CANSAT54G0792 Cannabis sativa HOM05D000014 ORTHO05D000016 1.7e-21 107.5 300 31.7
CANSAT78G1382 Cannabis sativa HOM05D000014 ORTHO05D000016 6.3e-21 105.5 156 38.5
CANSAT11G1889 Cannabis sativa HOM05D000014 ORTHO05D000016 1.2e-19 101.3 309 31.4
CANSAT78G0106 Cannabis sativa HOM05D000014 ORTHO05D000016 1.6e-19 100.9 294 31.0
CANSAT78G0146 Cannabis sativa HOM05D000014 ORTHO05D000016 4.5e-19 99.4 156 38.5
CANSAT11G1900 Cannabis sativa HOM05D000014 ORTHO05D000016 1.7e-18 97.4 154 36.4
CANSAT78G1747 Cannabis sativa HOM05D000014 ORTHO05D000016 1.1e-17 94.7 263 29.7
ClCG09G015190 Citrullus lanatus HOM05D000014 ORTHO05D000016 1.1e-17 94.7 256 34.0
CANSAT64G1133 Cannabis sativa HOM05D000014 ORTHO05D000016 1.9e-17 94.0 309 26.9
CANSAT54G2409 Cannabis sativa HOM05D000014 ORTHO05D000016 3.3e-17 93.2 185 34.6
CANSAT80G1806 Cannabis sativa HOM05D000014 ORTHO05D000016 4.2e-17 92.8 310 26.5
CsaV3_7G024730 Cucumis sativus L. HOM05D028019 ORTHO05D000977 1.6e-16 90.9 144 34.0
CANSAT56G2288 Cannabis sativa HOM05D000014 ORTHO05D000016 1.4e-15 87.8 121 38.8
ClCG01G012330 Citrullus lanatus HOM05D000004 ORTHO05D000002 1.2e-14 84.7 267 30.0
CANSAT21G0554 Cannabis sativa HOM05D000014 ORTHO05D000016 2.0e-14 84.0 296 30.1
ClCG01G011220 Citrullus lanatus HOM05D000014 ORTHO05D000016 2.0e-14 84.0 228 34.2
ClCG07G006140 Citrullus lanatus HOM05D000014 ORTHO05D000016 4.4e-14 82.8 114 43.9
Oeu014159.1 Olea europaea HOM05D000014 ORTHO05D000016 1.1e-12 78.2 130 33.8
ClCG07G007610 Citrullus lanatus HOM05D000014 ORTHO05D000016 1.8e-12 77.4 85 45.9
Oeu026335.1 Olea europaea HOM05D000014 ORTHO05D000016 1.8e-12 77.4 141 31.2
Oeu050542.1 Olea europaea HOM05D000014 ORTHO05D000016 2.4e-12 77.0 141 31.2
Oeu062184.1 Olea europaea HOM05D000014 ORTHO05D000016 2.4e-12 77.0 130 33.1
Oeu012510.1 Olea europaea HOM05D000014 ORTHO05D000016 5.4e-12 75.9 154 29.2
Oeu032575.1 Olea europaea HOM05D000014 ORTHO05D000016 5.4e-12 75.9 154 29.2
ClCG00G000610 Citrullus lanatus HOM05D000014 ORTHO05D000016 7.0e-12 75.5 169 33.1
Oeu012463.1 Olea europaea HOM05D000014 ORTHO05D000016 9.2e-12 75.1 141 30.5
Oeu045340.1 Olea europaea HOM05D000014 ORTHO05D000016 4.5e-11 72.8 154 28.6
Oeu015290.1 Olea europaea HOM05D000014 ORTHO05D000016 7.8e-11 72.0 126 33.3
Oeu002512.1 Olea europaea HOM05D000014 ORTHO05D000016 1.0e-10 71.6 121 33.9
PGR004G2403 Punica granatum HOM05D000014 ORTHO05D000016 1.0e-10 71.6 116 35.3
PGR026G0002 Punica granatum HOM05D000014 ORTHO05D000016 1.0e-10 71.6 116 35.3
PGR031G1161 Punica granatum HOM05D000014 ORTHO05D000016 1.0e-10 71.6 116 35.3
PGR031G1474 Punica granatum HOM05D000014 ORTHO05D000016 1.0e-10 71.6 116 35.3
PGR031G3309 Punica granatum HOM05D000014 ORTHO05D000016 1.0e-10 71.6 116 35.3
PGR042G3031 Punica granatum HOM05D000014 ORTHO05D000016 1.0e-10 71.6 116 35.3
PGR102G0067 Punica granatum HOM05D000014 ORTHO05D000016 1.0e-10 71.6 116 35.3
PGR102G0138 Punica granatum HOM05D000014 ORTHO05D000016 1.0e-10 71.6 116 35.3
PGR102G1143 Punica granatum HOM05D000014 ORTHO05D000016 1.0e-10 71.6 116 35.3
PGR142G0256 Punica granatum HOM05D000014 ORTHO05D000093 1.0e-10 71.6 116 35.3
PGR142G0407 Punica granatum HOM05D000014 ORTHO05D000016 1.0e-10 71.6 116 35.3
PGR142G2478 Punica granatum HOM05D000014 ORTHO05D000016 1.0e-10 71.6 116 35.3
PGR031G2833 Punica granatum HOM05D000014 ORTHO05D000016 1.3e-10 71.2 116 35.3
PGR042G2691 Punica granatum HOM05D000014 ORTHO05D000016 1.7e-10 70.9 116 35.3
Ca_11684_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 2.9e-10 70.1 134 34.3
Ca_30791_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 2.9e-10 70.1 134 34.3
PGR013G0002 Punica granatum HOM05D000014 ORTHO05D000016 2.9e-10 70.1 112 35.7
PGR031G1008 Punica granatum HOM05D000014 ORTHO05D000093 2.9e-10 70.1 112 35.7
PGR042G0004 Punica granatum HOM05D000014 ORTHO05D000093 2.9e-10 70.1 112 35.7
PGR044G0742 Punica granatum HOM05D000014 ORTHO05D000093 2.9e-10 70.1 112 35.7
PGR102G0846 Punica granatum HOM05D000014 ORTHO05D000016 2.9e-10 70.1 112 35.7
PGR142G1132 Punica granatum HOM05D000014 ORTHO05D000016 2.9e-10 70.1 112 35.7
PGR142G1552 Punica granatum HOM05D000014 ORTHO05D000093 2.9e-10 70.1 112 35.7
CANSAT11G1627 Cannabis sativa HOM05D000014 ORTHO05D000016 3.9e-10 69.7 269 28.3
FvH4_4g14130 Fragaria vesca HOM05D000014 ORTHO05D000093 5.0e-10 69.3 121 32.2
PGR083G0640 Punica granatum HOM05D000014 ORTHO05D000016 8.6e-10 68.6 116 34.5
Oeu017629.1 Olea europaea HOM05D000014 ORTHO05D000016 1.1e-09 68.2 154 28.6
Oeu053640.1 Olea europaea HOM05D000014 ORTHO05D000016 1.5e-09 67.8 109 34.9
Oeu025149.1 Olea europaea HOM05D000014 ORTHO05D000016 1.9e-09 67.4 154 27.9
CANSAT01G2673 Cannabis sativa HOM05D000014 ORTHO05D000016 2.5e-09 67.0 310 23.9
Oeu011853.1 Olea europaea HOM05D000014 ORTHO05D000016 3.3e-09 66.6 154 29.9
Oeu014642.1 Olea europaea HOM05D000014 ORTHO05D000016 5.6e-09 65.9 157 26.1
AUR62015090 Chenopodium quinoa HOM05D000014 ORTHO05D000016 9.5e-09 65.1 70 42.9
ClCG04G001460 Citrullus lanatus HOM05D000014 ORTHO05D000016 9.5e-09 65.1 122 32.0
AUR62028249 Chenopodium quinoa HOM05D012416 ORTHO05D000016 1.2e-08 64.7 76 39.5
AUR62042040 Chenopodium quinoa HOM05D012416 ORTHO05D000016 1.2e-08 64.7 76 39.5
Oeu007323.1 Olea europaea HOM05D000014 ORTHO05D000016 1.2e-08 64.7 126 31.7
Atru.chr7.342 Acer truncatum HOM05D000014 ORTHO05D000016 1.6e-08 64.3 83 33.7
PGR042G0504 Punica granatum HOM05D000014 ORTHO05D000016 2.1e-08 63.9 110 34.5
AUR62041173 Chenopodium quinoa HOM05D000014 ORTHO05D000016 2.8e-08 63.5 69 42.0
Oeu044885.1 Olea europaea HOM05D000014 ORTHO05D000016 2.8e-08 63.5 81 34.6
Oeu010205.1 Olea europaea HOM05D000014 ORTHO05D000016 3.6e-08 63.2 154 29.2
Oeu055325.1 Olea europaea HOM05D000014 ORTHO05D000016 3.6e-08 63.2 141 26.2
Oeu010981.1 Olea europaea HOM05D000014 ORTHO05D000016 4.7e-08 62.8 155 28.4
TWI15G0694 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 4.7e-08 62.8 170 28.2
Oeu028652.1 Olea europaea HOM05D000014 ORTHO05D000016 6.1e-08 62.4 111 32.4
TWI56G1009 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 1.0e-07 61.6 118 30.5
Oeu064136.1 Olea europaea HOM05D000014 ORTHO05D000016 1.4e-07 61.2 130 29.2
Manes.12G095501 Manihot esculenta HOM05D000014 ORTHO05D000016 1.8e-07 60.8 133 27.8
Ah.01g018090 Amaranthus hybridus HOM05D000014 ORTHO05D000016 2.3e-07 60.5 74 39.2
Ah.12g065520 Amaranthus hybridus HOM05D000014 ORTHO05D000093 2.3e-07 60.5 74 39.2
ClCG08G004620 Citrullus lanatus HOM05D000014 ORTHO05D000016 2.3e-07 60.5 89 43.8
Oeu010207.1 Olea europaea HOM05D000014 ORTHO05D000016 2.3e-07 60.5 111 30.6
Oeu016894.1 Olea europaea HOM05D000014 ORTHO05D000016 3.1e-07 60.1 158 27.2
CANSAT01G1712 Cannabis sativa HOM05D000014 ORTHO05D000016 4.0e-07 59.7 243 30.0
Ca_23929_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 4.0e-07 59.7 128 26.6
Oeu051738.1 Olea europaea HOM05D000014 ORTHO05D000016 4.0e-07 59.7 110 30.9
TWI74G0887 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 4.0e-07 59.7 122 31.1
Ah.01g016530 Amaranthus hybridus HOM05D000014 ORTHO05D000016 5.2e-07 59.3 126 29.4
AUR62030749 Chenopodium quinoa HOM05D000014 ORTHO05D000016 5.2e-07 59.3 56 44.6
Manes.06G029160 Manihot esculenta HOM05D000014 ORTHO05D000016 5.2e-07 59.3 133 27.8
TWI23G1083 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 5.2e-07 59.3 122 31.1
arahy.Tifrunner.gnm1.ann1.FDM7T1 Arachis hypogaea HOM05D000014 ORTHO05D000016 8.9e-07 58.5 119 28.6
CANSAT54G1842 Cannabis sativa HOM05D000014 ORTHO05D000016 8.9e-07 58.5 130 26.9
Ca_11934_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.2e-06 58.2 121 29.8
CANSAT25G0751 Cannabis sativa HOM05D000014 ORTHO05D000016 1.5e-06 57.8 274 25.9
CANSAT80G0958 Cannabis sativa HOM05D000014 ORTHO05D000016 1.5e-06 57.8 216 30.1
Ah.01g010830 Amaranthus hybridus HOM05D000014 ORTHO05D000016 2.0e-06 57.4 129 28.7
Ah.02g117660 Amaranthus hybridus HOM05D000014 ORTHO05D000016 2.0e-06 57.4 129 28.7
ClCG00G000600 Citrullus lanatus HOM05D000014 ORTHO05D000016 2.0e-06 57.4 119 34.5
Oeu051488.1 Olea europaea HOM05D000014 ORTHO05D000016 2.0e-06 57.4 97 28.9
TWI74G1255 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 2.0e-06 57.4 129 27.9
Manes.04G051445 Manihot esculenta HOM05D000014 ORTHO05D000016 2.6e-06 57.0 130 29.2
Oeu013226.1 Olea europaea HOM05D000014 ORTHO05D000016 2.6e-06 57.0 156 25.6
Oeu033705.1 Olea europaea HOM05D000014 ORTHO05D000016 2.6e-06 57.0 75 36.0
PSO063G6299 Papaver somniferum HOM05D000014 ORTHO05D000016 2.6e-06 57.0 85 31.8
PSO782G2329 Papaver somniferum HOM05D000014 ORTHO05D000016 2.6e-06 57.0 85 30.6
Ca_26291_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 3.4e-06 56.6 126 27.0
Oeu017734.1 Olea europaea HOM05D000014 ORTHO05D000016 3.4e-06 56.6 124 29.8
Oeu045886.1 Olea europaea HOM05D000014 ORTHO05D000016 3.4e-06 56.6 154 25.3
PSO017G7079 Papaver somniferum HOM05D000014 ORTHO05D000016 3.4e-06 56.6 85 30.6
Manes.08G076205 Manihot esculenta HOM05D000014 ORTHO05D000016 4.4e-06 56.2 130 27.7
Oeu016732.1 Olea europaea HOM05D000014 ORTHO05D000016 4.4e-06 56.2 201 27.4
TWI53G0394 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 4.4e-06 56.2 179 25.1
arahy.Tifrunner.gnm1.ann1.2128X5 Arachis hypogaea HOM05D000014 ORTHO05D000016 5.8e-06 55.8 119 27.7
arahy.Tifrunner.gnm1.ann1.2273GB Arachis hypogaea HOM05D000014 ORTHO05D000016 5.8e-06 55.8 88 30.7
COL.COLO4_22612 Corchorus olitorius HOM05D057353 ORTHO05D000016 5.8e-06 55.8 81 37.0
Oeu002485.1 Olea europaea HOM05D000014 ORTHO05D000016 5.8e-06 55.8 79 32.9
PSO339G1122 Papaver somniferum HOM05D000014 ORTHO05D000016 5.8e-06 55.8 84 32.1
arahy.Tifrunner.gnm1.ann1.I9FKSU Arachis hypogaea HOM05D000014 ORTHO05D000016 7.5e-06 55.5 149 26.8
arahy.Tifrunner.gnm1.ann1.X5U67K Arachis hypogaea HOM05D000014 ORTHO05D000016 7.5e-06 55.5 149 26.8
Nitab4.5_0008800g0020 Nicotiana tabacum HOM05D000014 ORTHO05D000016 7.5e-06 55.5 79 34.2
Oeu020307.1 Olea europaea HOM05D000014 ORTHO05D000016 7.5e-06 55.5 123 29.3
Ah.11g042020 Amaranthus hybridus HOM05D000014 ORTHO05D000016 9.8e-06 55.1 152 27.6
CANSAT80G0503 Cannabis sativa HOM05D000014 ORTHO05D000016 9.8e-06 55.1 246 28.0
ClCG03G009540 Citrullus lanatus HOM05D022306 ORTHO05D150682 9.8e-06 55.1 70 47.1
PSO017G3975 Papaver somniferum HOM05D000014 ORTHO05D000016 9.8e-06 55.1 81 32.1
PSO541G0146 Papaver somniferum HOM05D000014 ORTHO05D000016 9.8e-06 55.1 77 32.5
PSO541G6078 Papaver somniferum HOM05D000014 ORTHO05D000016 9.8e-06 55.1 77 31.2


User provided reference genes

Program Settings