Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG11G006990 Citrullus lanatus HOM05D000135 ORTHO05D000816 6.9e-19 97.8 47 100.0
MELO3C008204.2 Cucumis melo HOM05D000135 ORTHO05D000816 2.2e-17 92.8 47 93.6
CsaV3_2G034220 Cucumis sativus L. HOM05D000135 ORTHO05D000816 2.2e-17 92.8 47 93.6
Sed0013041 Sechium edule HOM05D000135 ORTHO05D000816 2.6e-13 79.3 47 80.9
MD17G1014200 Malus domestica HOM05D000135 ORTHO05D000816 4.5e-10 68.6 47 61.7
FvH4_6g53150 Fragaria vesca HOM05D000135 ORTHO05D000816 5.0e-09 65.1 47 59.6
FAN14G0778 Fragaria x ananassa HOM05D000135 ORTHO05D000816 5.0e-09 65.1 47 59.6
MD09G1013600 Malus domestica HOM05D000135 ORTHO05D000816 5.0e-09 65.1 47 57.4
Prupe.3G303600 Prunus persica HOM05D000135 ORTHO05D000816 4.2e-08 62.0 47 55.3
TWI12G0256 Tripterygium wilfordii HOM05D000135 ORTHO05D000816 4.2e-08 62.0 47 57.4
Lsat_1_v5_gn_9_1180 Lactuca sativa HOM05D000135 ORTHO05D000816 5.5e-08 61.6 44 61.4
RcHm_v2.0_Chr2g0175201 Rosa chinensis HOM05D000135 ORTHO05D000816 5.5e-08 61.6 47 57.4
ECA232G4862 Erigeron canadensis HOM05D000135 ORTHO05D000816 9.4e-08 60.8 46 54.3
FAN02G0421 Fragaria x ananassa HOM05D000135 ORTHO05D000816 2.1e-07 59.7 47 55.3
Lsat_1_v5_gn_4_185301 Lactuca sativa HOM05D000135 ORTHO05D000816 3.6e-07 58.9 46 56.5
QL02p071822 Quercus lobata HOM05D000135 ORTHO05D000816 3.6e-07 58.9 47 53.2
SalBow1G7946 Salvia bowleyana HOM05D000135 ORTHO05D000816 3.6e-07 58.9 47 51.1
SalBow7G1515 Salvia bowleyana HOM05D000135 ORTHO05D000816 3.6e-07 58.9 47 51.1
DCAR_015089 Daucus carota HOM05D000135 ORTHO05D000816 4.7e-07 58.5 47 53.2
Lalb_Chr14g0363211 Lupinus albus HOM05D000135 ORTHO05D000816 6.1e-07 58.2 47 51.1
Atru.chr6.2532 Acer truncatum HOM05D000135 ORTHO05D000816 8.0e-07 57.8 47 53.2
Actinidia05909 Actinidia chinensis HOM05D000135 ORTHO05D000816 1.4e-06 57.0 47 51.1
COL.COLO4_17166 Corchorus olitorius HOM05D000135 ORTHO05D000816 1.4e-06 57.0 47 55.3
Thecc.04G033300 Theobroma cacao HOM05D000135 ORTHO05D000816 1.8e-06 56.6 47 53.2
Migut.K01450 Erythranthe guttata HOM05D000135 ORTHO05D000816 2.3e-06 56.2 47 48.9
Glyma.16G059300 Glycine max HOM05D000135 ORTHO05D000816 2.3e-06 56.2 47 48.9
GSVIVG01010383001 Vitis vinifera HOM05D000135 ORTHO05D000816 2.3e-06 56.2 47 51.1
Cfa021347 Carpinus fangiana HOM05D000135 ORTHO05D000816 3.0e-06 55.8 47 51.1
Cc07_g00660 Coffea canephora HOM05D000135 ORTHO05D000816 3.0e-06 55.8 47 48.9
Lj7C609T6 Lonicera japonica HOM05D000135 ORTHO05D000816 3.0e-06 55.8 41 58.5
Duzib147G0709 Durio zibethinus HOM05D000135 ORTHO05D000816 4.0e-06 55.5 47 53.2
Eucgr.J02318 Eucalyptus grandis HOM05D000135 ORTHO05D000816 4.0e-06 55.5 47 53.2
TAR381G0615 Trochodendron aralioides HOM05D000135 ORTHO05D000816 4.0e-06 55.5 45 57.8
CAN.G1463.22 Capsicum annuum HOM05D000135 ORTHO05D000816 5.2e-06 55.1 46 54.3
Duzib264G0451 Durio zibethinus HOM05D000135 ORTHO05D000816 5.2e-06 55.1 47 53.2
Duzib264G0910 Durio zibethinus HOM05D000135 ORTHO05D000816 5.2e-06 55.1 47 53.2
SalBow7G4318 Salvia bowleyana HOM05D016915 ORTHO05D000816 5.2e-06 55.1 47 46.8
Sc07g0004160 Simmondsia chinensis HOM05D000135 ORTHO05D000816 5.2e-06 55.1 47 55.3
GSVIVG01008516001 Vitis vinifera HOM05D000135 ORTHO05D000816 5.2e-06 55.1 47 55.3
HanXRQChr15g0486921 Helianthus annuus HOM05D000135 ORTHO05D000816 6.7e-06 54.7 46 54.3
Manes.15G159100 Manihot esculenta HOM05D000135 ORTHO05D000816 6.7e-06 54.7 41 58.5
Manes.17G104400 Manihot esculenta HOM05D000135 ORTHO05D000816 6.7e-06 54.7 45 51.1
SGA_v2.0_scaffold47G17572 Striga asiatica HOM05D000135 ORTHO05D000816 6.7e-06 54.7 47 46.8
Migut.K01452 Erythranthe guttata HOM05D016915 ORTHO05D000816 8.8e-06 54.3 47 46.8
QL03p054203 Quercus lobata HOM05D000135 ORTHO05D000816 8.8e-06 54.3 47 51.1
SalBow1G3513 Salvia bowleyana HOM05D016915 ORTHO05D000816 8.8e-06 54.3 47 46.8
GSVIVG01010378001 Vitis vinifera HOM05D000135 ORTHO05D000816 8.8e-06 54.3 42 54.8
GSVIVG01010385001 Vitis vinifera HOM05D000135 ORTHO05D000816 8.8e-06 54.3 42 52.4


User provided reference genes

Program Settings