Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG11G005280 Citrullus lanatus HOM05D002617 ORTHO05D006076 0.0e+00 1216.1 608 100.0
MELO3C022066.2 Cucumis melo HOM05D002617 ORTHO05D006076 0.0e+00 1090.9 618 89.2
CsaV3_5G039050 Cucumis sativus L. HOM05D002617 ORTHO05D006076 1.1e-310 1069.3 618 88.2
Sed0011770 Sechium edule HOM05D002617 ORTHO05D006076 1.4e-270 936.0 612 80.6
Prupe.3G241000 Prunus persica HOM05D002617 ORTHO05D006076 3.5e-152 542.7 606 52.0
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 1.7e-151 540.4 546 56.2
CiPaw.03G005500 Carya illinoinensis HOM05D002617 ORTHO05D006076 2.5e-142 510.0 494 56.7
RcHm_v2.0_Chr2g0163421 Rosa chinensis HOM05D002617 ORTHO05D006076 2.4e-140 503.4 597 50.1
QL02p053118 Quercus lobata HOM05D002617 ORTHO05D006076 6.9e-140 501.9 600 52.5
CANSAT64G0391 Cannabis sativa HOM05D002617 ORTHO05D006076 7.6e-139 498.4 623 50.6
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 1.3e-138 497.7 697 46.5
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 6.4e-138 495.4 544 54.4
Hma1.2p1_0550F.1_g177160 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 2.7e-136 490.0 554 52.5
Duzib177G0627 Durio zibethinus HOM05D002617 ORTHO05D006076 1.5e-134 484.2 551 51.0
Dinv34860 Davidia involucrata HOM05D002617 ORTHO05D006076 1.9e-134 483.8 557 53.1
TAR629G1560 Trochodendron aralioides HOM05D002617 ORTHO05D006076 7.4e-134 481.9 551 53.2
Sabra04G0077200 Salix brachista HOM05D002617 ORTHO05D006076 4.8e-133 479.2 406 62.6
Oeu032874.2 Olea europaea HOM05D002617 ORTHO05D006076 6.2e-133 478.8 549 50.6
Potri.017G111300 Populus trichocarpa HOM05D002617 ORTHO05D006076 8.2e-133 478.4 607 50.1
Manes.02G066000 Manihot esculenta HOM05D002617 ORTHO05D006076 1.1e-132 478.0 506 53.8
MD17G1073100 Malus domestica HOM05D002617 ORTHO05D006076 1.4e-132 477.6 607 48.8
Cpa.g.sc179.38 Carica papaya HOM05D002617 ORTHO05D006076 1.8e-132 477.2 469 58.0
MD09G1082600 Malus domestica HOM05D002617 ORTHO05D006076 2.4e-132 476.9 615 47.6
Duzib235G0774 Durio zibethinus HOM05D002617 ORTHO05D006076 3.1e-132 476.5 569 49.6
Atru.chr8.797 Acer truncatum HOM05D002617 ORTHO05D006076 2.6e-131 473.4 545 52.3
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 2.6e-131 473.4 543 52.7
COL.COLO4_16207 Corchorus olitorius HOM05D002617 ORTHO05D006076 7.6e-131 471.9 420 59.3
Actinidia10244 Actinidia chinensis HOM05D002617 ORTHO05D006076 3.8e-130 469.5 518 52.9
Lj4A130T19 Lonicera japonica HOM05D002617 ORTHO05D006076 6.5e-130 468.8 555 50.8
Thecc.04G140400 Theobroma cacao HOM05D002617 ORTHO05D006076 8.4e-130 468.4 621 47.8
Peaxi162Scf00479g00121 Petunia axillaris HOM05D002617 ORTHO05D006076 3.2e-129 466.5 530 49.8
Potri.004G104400 Populus trichocarpa HOM05D002617 ORTHO05D006076 4.2e-129 466.1 412 61.2
Nitab4.5_0003461g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 1.0e-127 461.5 544 48.3
FAN02G4200 Fragaria x ananassa HOM05D002617 ORTHO05D006076 1.3e-127 461.1 630 47.3
TAR371G0417 Trochodendron aralioides HOM05D002617 ORTHO05D006076 1.3e-127 461.1 532 52.4
TWI74G0354 Tripterygium wilfordii HOM05D002617 ORTHO05D006076 5.1e-127 459.1 545 51.0
FvH4_6g45480 Fragaria vesca HOM05D002617 ORTHO05D006076 1.1e-126 458.0 604 49.8
Sabra17G0092600 Salix brachista HOM05D002617 ORTHO05D006076 5.7e-126 455.7 657 45.4
DCAR_026269 Daucus carota HOM05D002617 ORTHO05D006076 9.7e-126 454.9 548 47.8
Glyma.13G047700 Glycine max HOM05D002617 ORTHO05D006076 1.3e-125 454.5 476 56.1
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 2.2e-125 453.8 774 41.6
arahy.Tifrunner.gnm1.ann1.LH188B Arachis hypogaea HOM05D002617 ORTHO05D006076 4.8e-125 452.6 457 56.5
FAN14G4630 Fragaria x ananassa HOM05D002617 ORTHO05D006076 4.8e-125 452.6 603 48.4
arahy.Tifrunner.gnm1.ann1.B4TVCG Arachis hypogaea HOM05D002617 ORTHO05D006076 6.3e-125 452.2 459 56.2
Gohir.D13G172300 Gossypium hirsutum HOM05D002617 ORTHO05D006076 5.3e-124 449.1 609 47.1
Gorai.013G188400 Gossypium raimondii HOM05D002617 ORTHO05D006076 5.3e-124 449.1 614 47.9
Gohir.A13G161700 Gossypium hirsutum HOM05D002617 ORTHO05D006076 1.5e-123 447.6 609 47.1
Sopen03g009500 Solanum pennellii HOM05D002617 ORTHO05D000002 4.6e-120 436.0 548 47.1
CAN.G153.18 Capsicum annuum HOM05D002617 ORTHO05D006076 7.9e-120 435.3 448 54.0
Lalb_Chr02g0158361 Lupinus albus HOM05D002617 ORTHO05D006076 1.0e-119 434.9 473 53.5
Lalb_Chr21g0317971 Lupinus albus HOM05D002617 ORTHO05D006076 5.1e-119 432.6 444 55.6
Phvul.L003037 Phaseolus vulgaris HOM05D002617 ORTHO05D006076 6.7e-119 432.2 479 53.4
Hma1.2p1_0136F.1_g062020 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 3.3e-118 429.9 426 57.0
Nitab4.5_0004487g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 4.3e-118 429.5 537 46.7
VMungo0540G1549 Vigna mungo HOM05D002617 ORTHO05D006076 1.7e-117 427.6 476 52.7
Solyc03g045060.3 Solanum lycopersicum HOM05D002617 ORTHO05D006076 8.2e-117 425.2 548 46.0
Actinidia19593 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.1e-116 424.9 415 57.1
Lj2g0025982 Lotus japonicus HOM05D002617 ORTHO05D006076 6.9e-116 422.2 402 58.2
MSTRG.23826 Avicennia marina HOM05D002617 ORTHO05D006076 1.0e-114 418.3 529 47.8
Aqoxy3G00424 Aquilegia oxysepala HOM05D002617 ORTHO05D006076 1.7e-114 417.5 529 48.4
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 2.2e-114 417.2 555 47.7
HanXRQChr14g0439661 Helianthus annuus HOM05D002617 ORTHO05D006076 5.0e-114 416.0 552 46.9
Eucgr.J01460 Eucalyptus grandis HOM05D002617 ORTHO05D006076 1.4e-113 414.5 531 48.6
Cc07_g05010 Coffea canephora HOM05D002617 ORTHO05D006076 4.2e-113 412.9 428 53.7
EL10Ac5g11460 Beta vulgaris HOM05D002617 ORTHO05D006076 2.7e-112 410.2 404 55.7
Glyma.19G040800 Glycine max HOM05D002617 ORTHO05D006076 2.7e-112 410.2 453 54.1
Ca_26958_v3 Cicer arietinum L. HOM05D002617 ORTHO05D006076 3.6e-112 409.8 507 50.5
ECA232G1923 Erigeron canadensis HOM05D002617 ORTHO05D006076 4.7e-112 409.5 429 52.2
Psat0s1160g0440 Pisum sativum HOM05D002617 ORTHO05D006076 4.7e-112 409.5 415 57.8
Sc12g0007600 Simmondsia chinensis HOM05D002617 ORTHO05D006076 1.1e-110 404.8 541 47.7
Medtr6g016990 Medicago truncatula HOM05D002617 ORTHO05D006076 3.7e-109 399.8 465 52.3
Rhsim07G0215800 Rhododendron simsii HOM05D002617 ORTHO05D006076 1.4e-108 397.9 556 46.9
Aa31LG9G16990 Aethionema arabicum HOM05D002617 ORTHO05D006076 8.5e-106 388.7 435 52.9
AUR62029876 Chenopodium quinoa HOM05D002617 ORTHO05D006076 5.5e-105 386.0 405 53.1
HanXRQChr15g0489371 Helianthus annuus HOM05D002617 ORTHO05D006076 1.6e-104 384.4 335 60.0
ATR0598G067 Amborella trichopoda HOM05D002617 ORTHO05D006076 3.0e-103 380.2 455 50.8
THA.LOC104822697 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 2.0e-102 377.5 421 53.0
TPR.G9686 Trifolium pratense HOM05D002617 ORTHO05D006076 1.3e-101 374.8 431 51.0
Oeu043861.1 Olea europaea HOM05D002617 ORTHO05D006076 2.8e-101 373.6 648 39.2
PSO478G3319 Papaver somniferum HOM05D002617 ORTHO05D006076 8.2e-101 372.1 433 51.5
THA.LOC104805556 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 1.1e-100 371.7 502 47.8
PSO017G2525 Papaver somniferum HOM05D002617 ORTHO05D006076 2.4e-100 370.5 495 47.1
AUR62025837 Chenopodium quinoa HOM05D002617 ORTHO05D006076 9.1e-100 368.6 416 50.0
Lsat_1_v5_gn_4_175880 Lactuca sativa HOM05D002617 ORTHO05D006076 7.7e-99 365.5 432 49.3
PGR042G0381 Punica granatum HOM05D002617 ORTHO05D006076 7.7e-99 365.5 545 45.7
Carub.0007s3725 Capsella rubella HOM05D002617 ORTHO05D006076 2.2e-98 364.0 531 45.8
Thhalv10027714m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 2.1e-96 357.5 528 45.5
SGA_v2.0_scaffold204G41654 Striga asiatica HOM05D002617 ORTHO05D006076 2.1e-96 357.5 534 43.4
GSVIVG01011977001 Vitis vinifera HOM05D002617 ORTHO05D006076 2.1e-96 357.5 354 57.3
AL7G51930 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 8.0e-96 355.5 409 53.3
AT5G38600 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 8.8e-95 352.1 544 45.4
Sp7g03340 Schrenkiella parvula HOM05D002617 ORTHO05D006076 1.5e-94 351.3 409 53.1
BolC6t37041H Brassica oleracea HOM05D002617 ORTHO05D006076 2.0e-94 350.9 410 52.4
C06p18260 Brassica napus HOM05D000054 ORTHO05D006076 2.6e-94 350.5 410 52.2
AL2G25720 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 3.3e-94 350.1 329 56.8
Carub.0002s1348 Capsella rubella HOM05D002617 ORTHO05D006076 5.7e-94 349.4 392 51.5
BcaC08g44397 Brassica carinata HOM05D002617 ORTHO05D006076 7.5e-94 349.0 410 52.2
A07p19790 Brassica napus HOM05D002617 ORTHO05D006076 2.8e-93 347.1 409 51.8
BraA07t29680Z Brassica rapa HOM05D002617 ORTHO05D006076 2.8e-93 347.1 409 51.8
BcaB02g08001 Brassica carinata HOM05D002617 ORTHO05D006076 6.3e-93 345.9 513 45.4
CARHR214050 Cardamine hirsuta HOM05D002617 ORTHO05D006076 6.3e-93 345.9 470 48.3
unitig_736.g22255 Utricularia gibba HOM05D002617 ORTHO05D006076 1.3e-90 338.2 404 49.3
HPP92_011591 Vanilla planifolia HOM05D002617 ORTHO05D006076 1.1e-89 335.1 407 48.6
CARHR059670 Cardamine hirsuta HOM05D002617 ORTHO05D006076 5.5e-89 332.8 399 49.6
Aa31LG2G3590 Aethionema arabicum HOM05D002617 ORTHO05D006076 4.7e-88 329.7 466 45.5
AT1G67210 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 6.1e-88 329.3 337 54.3
Sp5g22140 Schrenkiella parvula HOM05D002617 ORTHO05D006076 3.0e-87 327.0 358 53.6
Zm00001eb182330 Zea mays HOM05D002617 ORTHO05D006076 1.7e-85 321.2 389 49.1
A02p14070 Brassica napus HOM05D002617 ORTHO05D006076 4.1e-84 316.6 481 45.5
BcaB05g24247 Brassica carinata HOM05D002617 ORTHO05D006076 2.7e-83 313.9 363 52.1
BraA02t06470Z Brassica rapa HOM05D002617 ORTHO05D006076 2.7e-83 313.9 391 50.6
Os06g0495700 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D006076 1.3e-82 311.6 421 47.3
BcaC03g14816 Brassica carinata HOM05D002617 ORTHO05D006076 3.8e-82 310.1 388 49.0
BolC2t08421H Brassica oleracea HOM05D002617 ORTHO05D006076 3.8e-82 310.1 388 49.0
C02p22680 Brassica napus HOM05D002617 ORTHO05D006076 8.6e-82 308.9 390 49.7
vmacro04611 Vaccinium macrocarpon HOM05D002617 ORTHO05D006076 8.6e-82 308.9 558 40.0
Thhalv10018682m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 5.5e-81 306.2 333 53.5
Sc11g0002970 Simmondsia chinensis HOM05D002617 ORTHO05D006076 7.2e-81 305.8 385 47.3
EL10Ac6g14526 Beta vulgaris HOM05D002617 ORTHO05D006076 2.1e-80 304.3 409 46.2
FAN05G1346 Fragaria x ananassa HOM05D002617 ORTHO05D006076 6.8e-79 299.3 463 43.6
AUR62007748 Chenopodium quinoa HOM05D002617 ORTHO05D006076 2.2e-77 294.3 459 42.0
Hund05776 Selenicereus undatus HOM05D002617 ORTHO05D006076 3.7e-77 293.5 406 46.3
AUR62002941 Chenopodium quinoa HOM05D002617 ORTHO05D006076 1.6e-75 288.1 411 43.6
FAN09G0965 Fragaria x ananassa HOM05D002617 ORTHO05D006076 3.5e-75 287.0 409 46.5
DCAR_026709 Daucus carota HOM05D002617 ORTHO05D006076 1.7e-74 284.6 466 44.6
CSS0005448 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 5.0e-74 283.1 270 60.7
Ah.03g138020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 8.6e-74 282.3 366 44.5
Actinidia29638 Actinidia chinensis HOM05D002617 ORTHO05D006076 7.8e-67 259.2 358 45.8
Lsat_1_v5_gn_8_37540 Lactuca sativa HOM05D002617 ORTHO05D006076 1.7e-66 258.1 284 50.7
Actinidia13004 Actinidia chinensis HOM05D002617 ORTHO05D006076 8.6e-66 255.8 353 45.3
CSS0031641 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 2.5e-65 254.2 251 59.0
CDE03G0434 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 4.4e-62 243.4 312 51.3
Mapoly0126s0021 Marchantia polymorpha HOM05D002617 ORTHO05D006076 6.6e-58 229.6 399 40.9
SMO005G0008 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 8.6e-58 229.2 326 43.3
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 1.8e-55 221.5 255 50.2
Ah.02g115020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 3.0e-50 204.1 412 36.2
Lj3A1022T61 Lonicera japonica HOM05D002617 ORTHO05D006076 6.6e-50 203.0 185 59.5
Dinv33922 Davidia involucrata HOM05D002617 ORTHO05D006076 2.8e-48 197.6 195 56.9
SMO197G0066 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 1.4e-47 195.3 271 42.8
Glyma.19G043901 Glycine max HOM05D002617 ORTHO05D006076 1.9e-41 174.9 205 53.2
SGA_v2.0_scaffold150G36614 Striga asiatica HOM05D002617 ORTHO05D006076 6.2e-40 169.9 588 30.3
CBR_g21963 Chara braunii HOM05D002617 ORTHO05D006076 3.8e-37 160.6 358 33.8
PGSC0003DMG400003361 Solanum tuberosum HOM05D002617 ORTHO05D006076 1.9e-36 158.3 179 50.8
Nn8g40574 Nelumbo nucifera HOM05D002617 ORTHO05D006076 2.4e-36 157.9 259 39.8
AagrBONN_evm.TU.Sc2ySwM_344.4970 Anthoceros agrestis HOM05D002617 ORTHO05D006076 2.5e-25 121.3 200 37.0
CDE04G2372 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 1.2e-22 112.5 136 45.6
Pp3c8_12390 Physcomitrium patens HOM05D002617 ORTHO05D006076 2.5e-20 104.8 332 29.2
SalBow1G4795 Salvia bowleyana HOM05D002617 ORTHO05D006076 3.2e-20 104.4 128 46.1
CSS0013506 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 6.2e-16 90.1 204 35.3
Actinidia19277 Actinidia chinensis HOM05D002617 ORTHO05D006076 2.4e-07 61.6 40 72.5
SEGI_27964 Sequoiadendron giganteum HOM05D002617 ORTHO05D006076 9.0e-07 59.7 45 60.0
CDE03G0290 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 3.4e-06 57.8 181 30.9


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