Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG11G004520 Citrullus lanatus HOM05D005136 ORTHO05D006619 3.4e-127 458.4 235 100.0
MELO3C020986.2 Cucumis melo HOM05D005136 ORTHO05D006619 5.9e-71 271.6 150 95.3
Sed0024996 Sechium edule HOM05D005136 ORTHO05D006619 1.3e-70 270.4 147 95.9
CsaV3_2G014570 Cucumis sativus L. HOM05D005136 ORTHO05D006619 5.0e-70 268.5 147 95.9
Cfa005022 Carpinus fangiana HOM05D005136 ORTHO05D006619 4.1e-64 248.8 147 89.8
Haze_02365 Corylus avellana HOM05D005136 ORTHO05D006619 4.1e-64 248.8 147 89.8
Thecc.02G123900 Theobroma cacao HOM05D005136 ORTHO05D006619 3.4e-63 245.7 147 87.1
Potri.004G152700 Populus trichocarpa HOM05D005136 ORTHO05D006619 3.8e-62 242.3 147 83.0
CiPaw.05G062700 Carya illinoinensis HOM05D005136 ORTHO05D006619 8.5e-62 241.1 147 86.4
COL.COLO4_32439 Corchorus olitorius HOM05D005136 ORTHO05D006619 8.5e-62 241.1 147 84.4
QL11p043069 Quercus lobata HOM05D005136 ORTHO05D006619 1.4e-61 240.4 146 87.7
Manes.17G099700 Manihot esculenta HOM05D005136 ORTHO05D006619 3.2e-61 239.2 147 85.0
Duzib132G0024 Durio zibethinus HOM05D005136 ORTHO05D006619 9.4e-61 237.7 147 85.7
Dinv23543 Davidia involucrata HOM05D005136 ORTHO05D006619 2.1e-60 236.5 147 83.7
VMungo1215G0362 Vigna mungo HOM05D005136 ORTHO05D006619 2.1e-60 236.5 147 83.7
Ciclev10029521m.g Citrus clementina HOM05D005136 ORTHO05D006619 2.7e-60 236.1 147 84.4
Phvul.002G127500 Phaseolus vulgaris HOM05D005136 ORTHO05D006619 3.6e-60 235.7 147 83.7
FvH4_2g08450 Fragaria vesca HOM05D005136 ORTHO05D006619 4.6e-60 235.3 144 84.7
FAN24G0166 Fragaria x ananassa HOM05D005136 ORTHO05D006619 4.6e-60 235.3 144 84.7
RcHm_v2.0_Chr6g0263731 Rosa chinensis HOM05D005136 ORTHO05D006619 4.6e-60 235.3 144 84.7
FAN27G1698 Fragaria x ananassa HOM05D005136 ORTHO05D006619 7.9e-60 234.6 146 83.6
FAN15G2434 Fragaria x ananassa HOM05D005136 ORTHO05D006619 1.0e-59 234.2 144 84.0
Gohir.D12G018500 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.0e-59 234.2 147 83.0
Gorai.008G018800 Gossypium raimondii HOM05D005136 ORTHO05D006619 1.0e-59 234.2 147 83.0
MD05G1068400 Malus domestica HOM05D005136 ORTHO05D006619 1.0e-59 234.2 149 83.2
Glyma.04G123300 Glycine max HOM05D005136 ORTHO05D006619 1.4e-59 233.8 147 83.0
Gohir.A12G017900 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.4e-59 233.8 147 83.0
CiPaw.06G136800 Carya illinoinensis HOM05D005136 ORTHO05D006619 2.3e-59 233.0 147 83.7
Cc02_g17760 Coffea canephora HOM05D005136 ORTHO05D006619 3.0e-59 232.6 147 83.7
vmacro08119 Vaccinium macrocarpon HOM05D005136 ORTHO05D006619 3.0e-59 232.6 147 83.7
TAR625G1013 Trochodendron aralioides HOM05D005136 ORTHO05D006619 5.1e-59 231.9 147 83.0
Cpa.g.sc31.66 Carica papaya HOM05D005136 ORTHO05D006619 6.7e-59 231.5 147 83.0
Rhsim11G0174400 Rhododendron simsii HOM05D005136 ORTHO05D006619 6.7e-59 231.5 180 71.1
Cc02_g20820 Coffea canephora HOM05D005136 ORTHO05D006619 2.5e-58 229.6 147 83.0
Ca_15377_v3 Cicer arietinum L. HOM05D005136 ORTHO05D006619 5.7e-58 228.4 147 82.3
Atru.chr8.1229 Acer truncatum HOM05D005136 ORTHO05D006619 7.4e-58 228.0 147 82.3
Lj3g0003138 Lotus japonicus HOM05D005136 ORTHO05D006619 9.7e-58 227.6 147 82.3
Prupe.8G100500 Prunus persica HOM05D005136 ORTHO05D006619 1.3e-57 227.3 147 84.4
MD10G1078600 Malus domestica HOM05D005136 ORTHO05D006619 1.7e-57 226.9 147 81.6
Nitab4.5_0009564g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 2.8e-57 226.1 148 81.1
TAR628G0554 Trochodendron aralioides HOM05D005136 ORTHO05D006619 2.8e-57 226.1 147 79.6
TAR628G1226 Trochodendron aralioides HOM05D005136 ORTHO05D006619 2.8e-57 226.1 147 79.6
Nn1g02125 Nelumbo nucifera HOM05D005136 ORTHO05D006619 3.7e-57 225.7 144 80.6
CSS0002049 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 4.8e-57 225.3 147 81.6
CSS0016345 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 4.8e-57 225.3 147 81.6
CSS0049550 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 4.8e-57 225.3 147 81.6
Dinv42084 Davidia involucrata HOM05D005136 ORTHO05D006619 1.1e-56 224.2 147 79.6
Lalb_Chr19g0138591 Lupinus albus HOM05D005136 ORTHO05D006619 1.4e-56 223.8 144 79.9
Eucgr.G00447 Eucalyptus grandis HOM05D005136 ORTHO05D006619 2.4e-56 223.0 147 80.3
Medtr3g116260 Medicago truncatula HOM05D005136 ORTHO05D006619 2.4e-56 223.0 149 79.9
Sopen08g026750 Solanum pennellii HOM05D005136 ORTHO05D006619 2.4e-56 223.0 147 77.6
CANSAT11G0677 Cannabis sativa HOM05D005136 ORTHO05D006619 5.3e-56 221.9 155 77.4
Peaxi162Scf00346g00043 Petunia axillaris HOM05D005136 ORTHO05D006619 5.3e-56 221.9 147 78.9
PGSC0003DMG400026262 Solanum tuberosum HOM05D005136 ORTHO05D006619 5.3e-56 221.9 147 77.6
DCAR_026977 Daucus carota HOM05D005136 ORTHO05D006619 6.9e-56 221.5 147 78.2
Lalb_Chr23g0265461 Lupinus albus HOM05D005136 ORTHO05D006619 6.9e-56 221.5 147 76.2
CSS0025161 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 9.1e-56 221.1 147 80.3
Solyc08g078240.4 Solanum lycopersicum HOM05D005136 ORTHO05D006619 1.2e-55 220.7 144 77.8
Hma1.2p1_1375F.1_g278970 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 2.0e-55 219.9 148 79.1
Hma1.2p1_3179F.1_g333696 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 2.0e-55 219.9 148 79.1
Hund22263 Selenicereus undatus HOM05D005136 ORTHO05D006619 2.6e-55 219.5 157 75.8
Glyma.09G214900 Glycine max HOM05D005136 ORTHO05D006619 4.5e-55 218.8 139 82.0
Migut.B00252 Erythranthe guttata HOM05D005136 ORTHO05D006619 1.3e-54 217.2 147 76.9
Psat5g007800 Pisum sativum HOM05D005136 ORTHO05D006619 6.5e-54 214.9 147 78.2
Ah.01g016850 Amaranthus hybridus HOM05D005136 ORTHO05D006619 8.5e-54 214.5 154 74.0
Psat5g103000 Pisum sativum HOM05D005136 ORTHO05D006619 8.5e-54 214.5 147 78.2
MBI16_g37741_MAGBIO Magnolia biondii HOM05D005136 ORTHO05D006619 1.1e-53 214.2 147 78.2
CAN.G1312.12 Capsicum annuum HOM05D005136 ORTHO05D006619 2.5e-53 213.0 147 76.9
HanXRQChr05g0152051 Helianthus annuus HOM05D005136 ORTHO05D006619 3.2e-53 212.6 147 76.9
Aqoxy5G01670 Aquilegia oxysepala HOM05D005136 ORTHO05D006619 4.2e-53 212.2 150 75.3
Oeu014338.1 Olea europaea HOM05D005136 ORTHO05D006619 4.2e-53 212.2 147 75.5
PGR042G3747 Punica granatum HOM05D005136 ORTHO05D006619 4.2e-53 212.2 147 76.2
Lsat_1_v5_gn_7_89621 Lactuca sativa HOM05D005136 ORTHO05D006619 5.5e-53 211.8 150 73.3
Lj5P199T42 Lonicera japonica HOM05D005136 ORTHO05D006619 5.5e-53 211.8 147 77.6
SalBow6G6037 Salvia bowleyana HOM05D005136 ORTHO05D006619 5.5e-53 211.8 147 76.2
PSO700G0271 Papaver somniferum HOM05D005136 ORTHO05D006619 7.2e-53 211.5 148 79.7
SGA_v2.0_scaffold106G30693 Striga asiatica HOM05D005136 ORTHO05D006619 2.7e-52 209.5 147 75.5
Sc09g0004050 Simmondsia chinensis HOM05D005136 ORTHO05D006619 4.7e-52 208.8 149 76.5
ATR1120G109 Amborella trichopoda HOM05D005136 ORTHO05D006619 6.1e-52 208.4 149 74.5
AUR62038311 Chenopodium quinoa HOM05D005136 ORTHO05D006619 1.8e-51 206.8 150 74.0
AUR62023928 Chenopodium quinoa HOM05D005136 ORTHO05D006619 3.0e-51 206.1 150 73.3
Nn1g05055 Nelumbo nucifera HOM05D005136 ORTHO05D006619 6.7e-51 204.9 147 73.5
TWI31G0294 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 8.8e-51 204.5 149 77.9
TWI79G0765 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 2.0e-50 203.4 152 77.6
MSTRG.16796 Avicennia marina HOM05D005136 ORTHO05D006619 2.6e-50 203.0 147 74.1
EL10Ac9g21088 Beta vulgaris HOM05D005136 ORTHO05D006619 3.3e-50 202.6 138 79.0
HPP92_013432 Vanilla planifolia HOM05D005136 ORTHO05D006619 2.2e-49 199.9 150 70.0
HPP92_027116 Vanilla planifolia HOM05D005136 ORTHO05D006619 2.2e-49 199.9 150 70.0
THA.LOC104823526 Tarenaya hassleriana HOM05D005136 ORTHO05D006619 4.8e-49 198.7 151 70.9
Gorai.005G228100 Gossypium raimondii HOM05D005136 ORTHO05D006619 3.1e-48 196.1 147 72.1
BcaB03g13232 Brassica carinata HOM05D005136 ORTHO05D006619 1.2e-47 194.1 152 69.1
Gohir.D02G202838 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.2e-47 194.1 147 71.4
Gohir.A03G179300 Gossypium hirsutum HOM05D005136 ORTHO05D006619 2.0e-47 193.4 147 71.4
Thhalv10008721m.g Eutrema salsugineum HOM05D005136 ORTHO05D006619 3.5e-47 192.6 158 69.0
Actinidia00512 Actinidia chinensis HOM05D005136 ORTHO05D006619 7.7e-47 191.4 157 66.9
CARHR012080 Cardamine hirsuta HOM05D005136 ORTHO05D006619 1.0e-46 191.0 153 69.9
Aa31LG1G2990 Aethionema arabicum HOM05D005136 ORTHO05D006619 1.7e-46 190.3 151 68.2
Sp1g10380 Schrenkiella parvula HOM05D005136 ORTHO05D006619 3.8e-46 189.1 154 68.2
AL1G22940 Arabidopsis lyrata HOM05D005136 ORTHO05D006619 1.9e-45 186.8 155 67.7
BolC8t49124H Brassica oleracea HOM05D004968 ORTHO05D005922 1.9e-45 186.8 147 68.0
C08p14950 Brassica napus HOM05D004968 ORTHO05D005922 5.5e-45 185.3 147 67.3
AT1G11760 Arabidopsis thaliana HOM05D005136 ORTHO05D006619 1.6e-44 183.7 154 67.5
unitig_37.g12818 Utricularia gibba HOM05D005136 ORTHO05D006619 4.7e-44 182.2 155 65.8
Carub.0001s1142 Capsella rubella HOM05D005136 ORTHO05D006619 6.1e-44 181.8 155 65.2
A08p33240 Brassica napus HOM05D004968 ORTHO05D005922 9.7e-42 174.5 139 67.6
BraA08t35243Z Brassica rapa HOM05D004968 ORTHO05D005922 9.7e-42 174.5 139 67.6
Prupe.5G020100 Prunus persica HOM05D005136 ORTHO05D006619 1.3e-41 174.1 150 62.7
TPR.G21542 Trifolium pratense HOM05D005136 ORTHO05D006619 1.7e-41 173.7 147 66.7
Os10g0548400 Oryza sativa ssp. japonica HOM05D005136 ORTHO05D006619 3.7e-41 172.6 162 59.9
PSO170G5319 Papaver somniferum HOM05D005136 ORTHO05D006619 4.8e-41 172.2 113 84.1
Nitab4.5_0002601g0030 Nicotiana tabacum HOM05D005136 ORTHO05D006619 2.0e-39 166.8 109 79.8
RcHm_v2.0_Chr6g0264001 Rosa chinensis HOM05D005136 ORTHO05D006619 1.0e-38 164.5 100 83.0
SalBow6G1117 Salvia bowleyana HOM05D005136 ORTHO05D006619 1.1e-37 161.0 105 78.1
ECA236G0931 Erigeron canadensis HOM05D005136 ORTHO05D006619 7.2e-37 158.3 149 61.1
Zm00001eb284000 Zea mays HOM05D005136 ORTHO05D006619 4.7e-36 155.6 150 58.7
BcaB08g37416 Brassica carinata HOM05D005136 ORTHO05D006619 1.8e-35 153.7 147 60.5
CSS0021040 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 4.0e-35 152.5 140 65.0
SHI23962 Sapria himalayana HOM05D005136 ORTHO05D006619 5.2e-35 152.1 133 65.4
EL10Ac7g17776 Beta vulgaris HOM05D005136 ORTHO05D006619 2.6e-34 149.8 136 62.5
Atru.chr5.2947 Acer truncatum HOM05D005136 ORTHO05D006619 4.5e-31 139.0 88 81.8
Pp3c10_12480 Physcomitrium patens HOM05D005136 ORTHO05D006619 9.5e-29 131.3 153 50.3
CDE02G3080 Ceratophyllum demersum HOM05D005136 ORTHO05D006619 8.8e-27 124.8 81 77.8
SMO174G0113 Selaginella moellendorffii HOM05D005136 ORTHO05D006619 8.8e-27 124.8 135 50.4
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 4.4e-26 122.5 91 70.3
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 4.4e-26 122.5 91 70.3
Mapoly0003s0019 Marchantia polymorpha HOM05D005136 ORTHO05D006619 7.5e-26 121.7 152 46.7
EL10Ac1g02225 Beta vulgaris HOM05D005136 ORTHO05D006619 1.2e-23 114.4 171 45.6
Medtr3g116310 Medicago truncatula HOM05D005136 ORTHO05D006619 5.6e-21 105.5 78 69.2
Psat4g095600 Pisum sativum HOM05D005136 ORTHO05D006619 4.0e-19 99.4 79 62.0
Oeu014337.1 Olea europaea HOM05D005136 ORTHO05D006619 8.9e-19 98.2 79 57.0
Sp2g23220 Schrenkiella parvula HOM05D005136 ORTHO05D006619 1.5e-18 97.4 88 59.1
AagrBONN_evm.TU.Sc2ySwM_369.532 Anthoceros agrestis HOM05D005136 ORTHO05D006619 2.6e-18 96.7 132 43.9
Lj4g0027023 Lotus japonicus HOM05D005136 ORTHO05D006619 5.7e-18 95.5 145 45.5
Thecc.02G123800 Theobroma cacao HOM05D005136 ORTHO05D006619 1.7e-17 94.0 71 64.8
Hma1.2p1_0854F.1_g228935 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 1.1e-16 91.3 71 62.0
Hma1.2p1_2665F.1_g326510 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 1.1e-16 91.3 71 62.0
Gohir.A03G179400 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.4e-16 90.9 69 63.8
Gorai.005G228200 Gossypium raimondii HOM05D005136 ORTHO05D006619 1.8e-16 90.5 69 63.8
Gohir.D02G202857 Gossypium hirsutum HOM05D005136 ORTHO05D006619 2.4e-16 90.1 69 62.3
COL.COLO4_32440 Corchorus olitorius HOM05D005136 ORTHO05D006619 9.2e-16 88.2 69 58.0
Sc09g0004030 Simmondsia chinensis HOM05D005136 ORTHO05D006619 9.2e-16 88.2 72 69.4
Nitab4.5_0012262g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 7.3e-13 78.6 77 54.5
Nitab4.5_0002541g0070 Nicotiana tabacum HOM05D005136 ORTHO05D024799 1.0e-11 74.7 72 54.2
CAN.G1435.13 Capsicum annuum HOM05D005136 ORTHO05D024799 7.5e-10 68.6 70 48.6
Os07g0229100 Oryza sativa ssp. japonica HOM05D011003 ORTHO05D012370 2.2e-09 67.0 72 50.0
ECA233G0803 Erigeron canadensis HOM05D005136 ORTHO05D006619 3.7e-09 66.2 125 41.6
Peaxi162Scf00316g00313 Petunia axillaris HOM05D005136 ORTHO05D006619 6.0e-07 58.9 51 60.8
Solyc09g082750.1 Solanum lycopersicum HOM05D005136 ORTHO05D024799 7.8e-07 58.5 72 41.7


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